CX671675
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671675 vs. ExPASy Swiss-Prot
Match: TOC33_ARATH (Translocase of chloroplast 33, chloroplastic OS=Arabidopsis thaliana GN=TOC33 PE=1 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.594e-57 Identity = 107/166 (64.46%), Postives = 132/166 (79.52%), Query Frame = -3 Query: 294 VDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLNYDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAWIPTLVKGITDVATNKSKSIVVDKKLIDGSGSDDKGKMWIPAVIGLQWLILKWIEGAIKSDIAKDKKP 791 VD+LD+Q++ A+T TFGK+IW K+LLVLTHAQ PPD L+Y+ + SKRSD+LLKTIR G+ + K EFED A+ V ENSGRCSKN+ DEK LPNG AWIP LVK ITDVATN+ K+I VDKK++DGS SDDKGK IP +IG Q+LI+K I+GAI++DI KP Sbjct: 131 VDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPDELSYETFSSKRSDSLLKTIRAGSKMRKQEFEDSAIAVVYAENSGRCSKNDKDEKALPNGEAWIPNLVKAITDVATNQRKAIHVDKKMVDGSYSDDKGKKLIPLIIGAQYLIVKMIQGAIRNDIKTSGKP 296
BLAST of CX671675 vs. ExPASy Swiss-Prot
Match: TOC34_ARATH (Translocase of chloroplast 34, chloroplastic OS=Arabidopsis thaliana GN=TOC34 PE=1 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 4.435e-49 Identity = 94/171 (54.97%), Postives = 129/171 (75.44%), Query Frame = -3 Query: 282 VDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLNYDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAWIPTLVKGITDVATNKSKSIVVDKKLIDGSGSDDKGKMWIPAVIGLQW-LILKWIEGAIKSDIAKDKKPY*EL 791 VDDLDRQ++ A+T FGK+IW+KS LVLTHAQ PPDGLNY+ + SKRS+ALLK I+ GA L K + + +++PV LVENSGRC KNE+DEKILP G +WIP L IT+++ N +K+I VDKKL++G +++GK IP + Q+ L++K + AIKSD++++ KP EL Sbjct: 133 VDDLDRQVVGAITDAFGKEIWKKSALVLTHAQFSPPDGLNYNHFVSKRSNALLKVIQTGAQLKKQDLQGFSIPVILVENSGRCHKNESDEKILPCGTSWIPNLFNKITEISFNGNKAIHVDKKLVEGPNPNERGKKLIPLMFAFQYLLVMKPLVRAIKSDVSRESKPAWEL 303
BLAST of CX671675 vs. ExPASy Swiss-Prot
Match: TOC34_PEA (Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.875e-48 Identity = 95/167 (56.89%), Postives = 125/167 (74.85%), Query Frame = -3 Query: 294 VDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLNYDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAWIPTLVKGITDVATNKSKSIVVDKKLIDGSGSDDKGKMWIPAVIGLQWLIL-KWIEGAIKSDIAKDKKP 791 VD+LD+ + KA+T +FGK IW K+++ LTHAQ PPDGL YD + SKRS+ALL+ +R GA L K + + +PV L+ENSGRC+KN++DEK+LPNG AWIP LV+ IT+VA NKS+SI VDK LIDG + +GK+WIP + LQ+L L K IE I+ DIA + KP Sbjct: 134 VDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASL-KKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLIDGPNPNQRGKLWIPLIFALQYLFLAKPIEALIRRDIATETKP 299
BLAST of CX671675 vs. ExPASy Swiss-Prot
Match: TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana GN=TOC120 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.490e-12 Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = -3 Query: 480 DDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLN-----YDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAWIPTLV 788 D D +++ +T FG IW +++ LTHA PPDG N YD++ ++RS + + IR AG + PV+LVEN C N +++LPNG W P L+ Sbjct: 555 DSGDMPLLRTITDVFGPSIWFNAIVGLTHAASAPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAGDMR-----LMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLL 657
BLAST of CX671675 vs. ExPASy Swiss-Prot
Match: TC132_ARATH (Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana GN=TOC132 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.663e-12 Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = -3 Query: 480 DDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLN-----YDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAWIPTLV 788 D D +++ ++ FG IW +++ LTHA PPDG N YD++ ++RS + + IR AG + PV+LVEN C N +++LPNG W P L+ Sbjct: 673 DSGDMPLLRTISDVFGPSIWFNAIVGLTHAASVPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAGDMR-----LMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLL 775
BLAST of CX671675 vs. ExPASy Swiss-Prot
Match: TC159_ARATH (Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.810e-11 Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = -3 Query: 495 VDDLDRQ--------IIKAVTGTFGKQIWRKSLLVLTHAQLCPPDG-----LNYDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAW 791 VD LD Q +++ +T + G IW+ +++ LTHA PPDG L+YDV+ ++ S + ++I G + PV+LVEN C KN K+LPNG W Sbjct: 945 VDRLDTQTRDLNNLPLLRTITASLGTSIWKNAIVTLTHAASAPPDGPSGTPLSYDVFVAQCSHIVQQSIGQAVGDLRLMNPSLMNPVSLVENHPLCRKNREGVKVLPNGQTW 1056 The following BLAST results are available for this feature:
BLAST of CX671675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671675 ID=CX671675; Name=CX671675; organism=Citrus sinensis; type=EST; length=808bpback to top |