CX043612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043612 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.057e-55 Identity = 103/172 (59.88%), Postives = 135/172 (78.49%), Query Frame = -2 Query: 79 AAGIADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSLINKFAGKH 594 A+ +FI++SC TTYPA+C QSLSAYA +IQ +P++LA TAL VSL+R Q A++F+ +L KF+ LK R+Y AI DCL+E+ D++DR+S+S E+ ++ AKG DF + MSNVETWVSAALTDE TC DGF GK ++GK+K SVRAQVV VA+VTSNAL+L+N FA KH Sbjct: 20 ASAAPANQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAAKH 191
BLAST of CX043612 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.256e-16 Identity = 50/158 (31.65%), Postives = 89/158 (56.33%), Query Frame = -2 Query: 100 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSF--VTKLRKFRNLKHREYGAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSLI 567 ++SSC ST YP LC +++A + ++ Q V +S++++ ++ + KL K NL RE A+ DCL+ + +T+D L K+V++L K H +++T +SAA+T++ TC DGF V+ ++ V+V ++ SNAL++I Sbjct: 69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLS--QHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224
BLAST of CX043612 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.256e-16 Identity = 50/158 (31.65%), Postives = 89/158 (56.33%), Query Frame = -2 Query: 100 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSF--VTKLRKFRNLKHREYGAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSLI 567 ++SSC ST YP LC +++A + ++ Q V +S++++ ++ + KL K NL RE A+ DCL+ + +T+D L K+V++L K H +++T +SAA+T++ TC DGF V+ ++ V+V ++ SNAL++I Sbjct: 69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLS--QHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224
BLAST of CX043612 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 8.999e-15 Identity = 48/168 (28.57%), Postives = 89/168 (52.98%), Query Frame = -2 Query: 100 VTAAGIADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKL-RKFRNLKHREYGAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSLI 600 +T ++S C ST YP LC +++A S +++ +L+++ + V KL K + L RE A+ DCL+ + +T+D L +V++L+ + K H +++T +S+A+T++ TC DGF + KV+ ++ V+V + SNAL++I Sbjct: 51 ITTLSSTSHAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKS--LRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMI 216
BLAST of CX043612 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.535e-14 Identity = 46/157 (29.30%), Postives = 91/157 (57.96%), Query Frame = -2 Query: 100 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKL-RKFRNLKHREYGAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSLI 567 +RSSC ST YP LC+ ++ S + + +++++++ + V KL +K + L RE A+ DCL+ + +T+D L ++V++L H+ K + H +++T +S+A+T++ TC DGF + +V+ ++ ++V + SNAL++I Sbjct: 59 LRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDL-HLYPTK-KTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMI 213
BLAST of CX043612 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14 Identity = 54/165 (32.73%), Postives = 82/165 (49.70%), Query Frame = -2 Query: 85 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDEMGDTVDRLSKSVQELNHM-GRAKGQDFLWHMSNVETWVSAALTDENTCTDGFG---GKALEGKVKSSVRAQVVNVAQVTSNALSLINKFAG 567 +++ C +T YP+ C S+S+ S P L +L V++ S F +KLR R AI C GD +DRL+ S+ L + GR +SNVETW+SAALTD++TC D G A G ++ + + N + SN+L+++ K G Sbjct: 77 LKAVCDTTRYPSSCFSSISSLPESNTTDPELLFKLSLRVAIDELSS---FPSKLRANAEQDARLQKAIDVCSSVFGDALDRLNDSISALGTVAGRIASSA---SVSNVETWLSAALTDQDTCLDAVGELNSTAARGALQ-EIETAMRNSTEFASNSLAIVTKILG 234
BLAST of CX043612 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.201e-12 Identity = 46/159 (28.93%), Postives = 88/159 (55.35%), Query Frame = -2 Query: 100 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSF--VTKLRKFRN-LKHREYGAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSLI 567 ++S+C +T +P LC ++ + ++ Q V LS++++ +++ V +L K R L RE A+ DCL+ M +T+D L +V++L K H+ +++T +S+A+T++ TC DGF + KV+ + +V ++ SNAL++I Sbjct: 66 VKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKS--LKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMI 222
BLAST of CX043612 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.201e-12 Identity = 50/158 (31.65%), Postives = 84/158 (53.16%), Query Frame = -2 Query: 97 IRSSCKSTTYPALCVQSLSAYAPSIQ-QSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSLIN 567 I +C+ T +P LCV SL + S+ S + L ++++L A L F ++ R A C++ + D+VD LS+++ + AK QD V TW+SAALT+ +TCT+GF G +G VK + A + N++++ SN L++ + Sbjct: 87 ISKACELTRFPELCVDSLMDFPGSLAASSSKDLIHVTVNMTLHHFSHALYSSASL-SFVDMPPRARSAYDSCVELLDDSVDALSRALSSVVSSS-AKPQD-------VTTWLSAALTNHDTCTEGFDG-VDDGGVKDHMTAALQNLSELVSNCLAIFS 234
BLAST of CX043612 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12 Identity = 45/166 (27.11%), Postives = 86/166 (51.81%), Query Frame = -2 Query: 82 TRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGG-KALEGKVKSSVRAQVVNVAQVTSNALSLINKFAGK 576 T+ I +C + YP LC+ +L + S+ +L + + +L + A + + + + R A CL+ + D+VD L++++ + + + S+V TW+S+A+T+ +TCTDGF + G+VK V V +++++ SN L++ FAGK Sbjct: 72 TQAISRTCSKSLYPNLCIDTLLDFPGSLTADENELIHISFNATLQKFSKAL-YTSSTITYTQMPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDESH------SDVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAI---FAGK 227
BLAST of CX043612 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11 Identity = 44/165 (26.67%), Postives = 78/165 (47.27%), Query Frame = -2 Query: 91 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFG------GKALEGKVKSSVRAQVVNVAQVTSNALSLINKF 567 +R+ C T YPA CV S+S S P L +L V ++ S KL + + R +++ C D D +D ++ ++ + +G K + ++TW+SAA+TD +TC D + + +++ +VN + TSN+L++I KF Sbjct: 271 LRNVCSVTRYPASCVSSISKLPSSNTTDPEALFRLSLQVVINELNSIAGLPKKLAEETD-DERLKSSLSVCGDVFNDAIDIVNDTISTMEEVGDGKKILKSSTIDEIQTWLSAAVTDHDTCLDALDELSQNKTEYANSPISLKLKSAMVNSRKFTSNSLAIIAKF 434 The following BLAST results are available for this feature:
BLAST of CX043612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043612 ID=CX043612; Name=CX043612; organism=Citrus sinensis; type=EST; length=676bpback to top |