CX671575

Overview
NameCX671575
Unique NameCX671575
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX671575_ssr160 microsatellite CX671575_ssr160:160..195. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8449 contig Csv1_Contig8449:63..922. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671575 vs. ExPASy Swiss-Prot
Match: DI194_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp. japonica GN=DI19-4 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 4.228e-61
Identity = 122/222 (54.95%), Postives = 150/222 (67.57%), Query Frame = 3
Query:  231 MDSDFWTSRLAAAKRQYTLQQ---HHHQS----------SQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQXXXXXXXVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISK-SVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEERE 854
            MDSD W SRL AAKRQY LQ+   HHH +          S +DR   DD E ED+VRPDFPCPYCYED DI SLC+HLEDEH  ESKV  CP+CS ++++D+L HITLQH +LF+LQ       VA+PS+ ALSL GRDL+E +L+VLLG S  RSS  N +++ TD  LSSL+LN  SSEAE+ +K S +   E+   K   P+  WK S D +LS EERE
Sbjct:    1 MDSDHWISRLMAAKRQYALQRAQNHHHATATATATAASHSHLDRYGYDDVEPEDEVRPDFPCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHSYLFRLQRHHRLRRVAVPSNHALSLGGRDLQETYLKVLLGNSS-RSSGTNAASSVTDSLLSSLVLNLSSSEAEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQEERE 221          
BLAST of CX671575 vs. ExPASy Swiss-Prot
Match: DI191_ORYSJ (Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica GN=DI19-1 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.078e-56
Identity = 111/209 (53.11%), Postives = 142/209 (67.94%), Query Frame = 3
Query:  231 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQXXXXXXXVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSN-ANISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEERE 854
            MDS+ W SRLAAAKR Y  Q  H      DR  +++ +++++VRP+F CPYCYED D+ SLC+HLE+EH  E     CPICS K+A+DML+HIT+QHG+LFK           IP SQALSLL RDLREAHLQVLLGG G+RS+N +N +N + DP LSS  L+FP+S+ EE SK  ++  +D S     P   W +S D SL+ EERE
Sbjct:    1 MDSEHWISRLAAAKRFYAAQLGH-----ADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLFK--NRRRLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISIPDDASVIKETPAQPWDSSIDSSLTREERE 202          
BLAST of CX671575 vs. ExPASy Swiss-Prot
Match: DI193_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp. japonica GN=DI19-3 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.253e-45
Identity = 104/224 (46.43%), Postives = 127/224 (56.70%), Query Frame = 3
Query:  231 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVR---------------PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQXXXXXXXVAIPSSQALSLLGRDLREAHLQVLLGGS-GYRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEERE 854
            MDS+ W S LAAAKR Y  Q  H        +   + E+EDD                 PD  CPYCYED DIASLC+HLE++H  E   + CPIC  K+ RDML+HIT+QHG+LFK           IP SQALSLL RDLR+A LQ LLGG    R SN   +N + DP LSS  L F + ++EE SK+ V   +DTS     P   W++  D SL+ EERE
Sbjct:    1 MDSEHWISSLAAAKRFYAAQLGHVDDMAGIGMEEVEMEMEDDGEGMELELEMQLEEATWPDVACPYCYEDHDIASLCAHLEEDHPYEPHTSPCPICFEKITRDMLNHITMQHGYLFK--SGRRMRRFDIPESQALSLLSRDLRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLGFSTLDSEERSKAPVPIPDDTSIHKDTPAQPWESRIDSSLTSEERE 222          
BLAST of CX671575 vs. ExPASy Swiss-Prot
Match: DI193_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana GN=DI19-3 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.574e-29
Identity = 71/199 (35.68%), Postives = 109/199 (54.77%), Query Frame = 3
Query:  231 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQXXXXXXXVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFP----------SSEAEEISKSVVTSTEDTSAKSAA 797
            MDSD W+ RLA+A R+Y L      S     L  ++ + E++ R +F CP+C + FDI SLC H++++H  E+K  VCP+C+V+V  DM++HITLQH ++FK+            S   LS+L R+  + + Q L GGS    S+++ SN A DP LSS I              S+E   + K+ +    + +AK  +
Sbjct:    1 MDSDSWSDRLASATRRYQLA---FPSRSDTFLGFEEIDGEEEFREEFACPFCSDYFDIVSLCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGG--SYSTLSILRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFISPIADGFFTTESCISAETGPVKKTTIQCLPEQNAKKTS 194          
BLAST of CX671575 vs. ExPASy Swiss-Prot
Match: DI196_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana GN=DI19-6 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.163e-28
Identity = 74/206 (35.92%), Postives = 119/206 (57.77%), Query Frame = 3
Query:  231 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQXXXXXXXVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEE 848
            MDSD W+ RLA+A R+Y L      S   + L  ++ E EDD R ++ CP+C + FDI SLC H++++H  ++K  VCPIC+VKV+ DM++HITLQH ++FK+            S   LS+L R+  + + Q L  G+  R+ +++ ++ A DP LSS I   P ++   IS+S + +   ++ K+   +   +     SLS E+
Sbjct:    1 MDSDSWSDRLASASRRYQLD---FLSRSDNFLGFEEIEGEDDFREEYACPFCSDYFDIVSLCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRKRKSRRGGAQS--MLSILKREFPDGNFQSLFEGTS-RAVSSSSASIAADPLLSSFI--SPMADDFFISESSLCADTSSAKKTLNQSLPERNVEKQSLSAED 198          
BLAST of CX671575 vs. ExPASy Swiss-Prot
Match: DI192_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp. japonica GN=DI19-2 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 6.163e-28
Identity = 72/202 (35.64%), Postives = 108/202 (53.47%), Query Frame = 3
Query:  249 TSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQXXXXXXXVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEERE 854
            +S  AAA+R       +      D   +++ E        + CP+C EDFD  + C H++DEH+ E+K  VCPIC+ +V  D++ H+T+QHG  FK+Q       ++  S   LSLL +DLR+  LQ  LGGS Y S   N   AA DPFLSSLI + P +E  +   S   S+++    +  P        +PSLS ++++
Sbjct:   15 SSAAAAARRLQARYDLYMGFDDADAAGVEEVEARGGGEA-YNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRRRRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSYVS---NPPAAAPDPFLSSLICSLPVAEPSKDLHS--DSSDNNFLLNKFPDDKTAERAEPSLSEKDQK 210          
BLAST of CX671575 vs. ExPASy Swiss-Prot
Match: DI194_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana GN=DI19-4 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.982e-26
Identity = 64/174 (36.78%), Postives = 98/174 (56.32%), Query Frame = 3
Query:  333 DDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQXXXXXXXVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEERE 854
            +D E EDD++ +F CP+C EDFDI  LC H+++EH  E+K  VCP+C+ +V  D++ HIT QH + FK+Q           S+     L ++LREA+LQ LLGGS   +S+ NI    +DP LSS + N PS        +   +  + + K +    + +   +  LS E++E
Sbjct:   35 EDLEGEDDLKAEFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVCPVCTKRVGLDIVGHITTQHANFFKVQRRRRLRRGGYSSTYL--ALKKELREANLQSLLGGSSSFTSSTNID---SDPLLSSFMFNSPSVNQSANKSATPVTVGNAATKVSIKESLKRDIQEAPLSGEDQE 203          
BLAST of CX671575 vs. ExPASy Swiss-Prot
Match: DI191_ARATH (Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana GN=DI19-1 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.192e-25
Identity = 63/148 (42.57%), Postives = 92/148 (62.16%), Query Frame = 3
Query:  324 LSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQXXXXXXXVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAAT-DPFLSSLI--LNFPSSEAEEISKSV 758
            +  ++ + +DD + +F CP+C E +DI  LC H++DEH+ ESK  VCP+CS+KV  D+++HITL HG LFKLQ           ++  LSLL ++LRE  LQ LL   G+ S N +++++ T DP LSS I      SS A   +K+V
Sbjct:   20 MGFEEIDGDDDFQEEFACPFCAESYDIIGLCCHIDDEHTLESKNAVCPVCSLKVGVDIVAHITLHHGSLFKLQRKRKSRKSG--TNSTLSLLRKELREGDLQRLL---GFTSRNGSVASSVTPDPLLSSFISPTRSQSSPAPRQTKNV 162          
BLAST of CX671575 vs. ExPASy Swiss-Prot
Match: DI197_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana GN=DI19-7 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.052e-23
Identity = 70/209 (33.49%), Postives = 108/209 (51.67%), Query Frame = 3
Query:  231 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQXXXXXXXVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSF-DPSLSHEERE 854
            MDS+ W +         + +++  +S     L + D E EDD++ +F CP+C ++FDI  LC H++  H  E+K  VCP+C+ KV  D++ HIT QHG++FK+Q           S+     L ++LREA+LQ L G S +  S    SN  +DP LSS +   PS+         +  TE  S    +P    K+     S S+E++E
Sbjct:    1 MDSNSWINCPPVFSSSPSSRRYQSRSD----LYLGDVEGEDDLKAEFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVGHITTQHGNVFKVQRRRRLRKGGYSSTYL--TLKKELREANLQSLGGSSTFIPS----SNIDSDPLLSSFMFKPPSA---------IPITEGDSVAQVSPKDTSKSKIQQESFSNEDQE 190          
BLAST of CX671575 vs. ExPASy Swiss-Prot
Match: DI195_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabidopsis thaliana GN=DI19-5 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.814e-15
Identity = 49/164 (29.88%), Postives = 82/164 (50.00%), Query Frame = 3
Query:  336 DFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQXXXXXXXVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEI---SKSVVTSTEDTSAKSAAPTHMWKT 818
            +FE +D++  D+PCP+C +D+D+  LC H+++EH  ++   +CP+CS +V   M+ HIT QH  +FK           +   ++ S      R+ +LQ L+       S  + S +  DP L S I N PS +  ++     S   S ED S    +    W++
Sbjct:   32 EFEDDDEMAVDYPCPFCSDDYDLVELCHHIDEEHQLDANNGICPVCSRRVKMHMVDHITTQHRDVFK----------RLYKDESYSAFSPGTRK-YLQSLIDEP---LSTNHTSKSVLDPLL-SFIYNPPSPKKSKLVQPDSSSEASMEDNSLIRDSTEKDWES 180          
The following BLAST results are available for this feature:
BLAST of CX671575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
DI194_ORYSJ4.228e-6154.95Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza ... [more]
DI191_ORYSJ1.078e-5653.11Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa sub... [more]
DI193_ORYSJ3.253e-4546.43Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza ... [more]
DI193_ARATH5.574e-2935.68Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabid... [more]
DI196_ARATH6.163e-2835.92Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabid... [more]
DI192_ORYSJ6.163e-2835.64Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza ... [more]
DI194_ARATH1.982e-2636.78Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabid... [more]
DI191_ARATH2.192e-2542.57Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thal... [more]
DI197_ARATH2.052e-2333.49Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabid... [more]
DI195_ARATH7.814e-1529.88Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11H06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11H06-P11-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671575 ID=CX671575; Name=CX671575; organism=Citrus sinensis; type=EST; length=855bp
CTCGCCCATAATCAAACCTGAAACAACTCCAAAGAACAAGTCGAAGAAAC
CTGAGAAGAGATCTTTGCCAAGAGATTAAACGAACAAAATTTTCATTTTG
TTTATTTGTCGAGATTCGTTTTTTAATATCAAATATAATAACAATAATCA
TTAATAATCAATAATAATAATAATAATAATAATAATAATAATAATATTGA
AGCAGCAGCGACTCAGTTTCTAATATTCCAATGGATTCCGATTTCTGGAC
CTCTCGTCTGGCCGCCGCCAAGCGTCAGTACACGTTGCAGCAGCATCATC
ATCAGAGCTCTCAAATAGATCGGCTGAGCATAGATGATTTTGAGGTAGAA
GATGATGTACGGCCTGATTTTCCATGTCCGTACTGTTATGAGGATTTTGA
TATAGCGTCGCTGTGTTCGCATCTCGAAGATGAGCACTCCTGCGAGTCCA
AAGTTACCGTTTGTCCCATTTGCTCAGTTAAAGTTGCACGGGACATGTTA
AGTCATATTACTTTGCAGCATGGACACTTGTTCAAGTTGCAGAGACGTCG
CAGATTACGTAGAGTTGCAATTCCTAGCAGTCAAGCACTCTCTCTCCTGG
GCCGGGATCTTCGTGAAGCTCATCTGCAAGTGCTTTTAGGGGGTAGTGGA
TATCGGTCTAGCAATGCTAACATCTCTAATGCAGCTACCGATCCTTTTCT
TTCTTCTCTTATTTTGAATTTTCCTTCATCAGAAGCTGAGGAAATTTCAA
AATCTGTTGTAACCAGTACTGAAGATACTAGTGCAAAAAGTGCTGCACCA
ACACATATGTGGAAAACAAGTTTTGATCCTTCTTTGAGTCATGAAGAGCG
GGAAA
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