CX671565

Overview
NameCX671565
Unique NameCX671565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5066 contig Csv1_Contig5066:1..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671565 vs. ExPASy Swiss-Prot
Match: CP74A_ARATH (Allene oxide synthase, chloroplastic OS=Arabidopsis thaliana GN=CYP74A PE=1 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 4.309e-37
Identity = 79/171 (46.20%), Postives = 112/171 (65.50%), Query Frame = -1
Query:  372 LQAKLRSEVKEKCGTSALTFESVKSLELVQSVVCETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESI--------TGNSSSITAVEKA 860
            L  ++RS +K   G   LT  +++ +EL +SVV E LR  PPV  Q+ RA+KD  + S+D+ + +K GE+L GYQPL  RD K+FD A+ F  ERF+GE+G +LL ++ WSNGP+T TP   NKQCAGKD+V LVA L V  +F+RY+S          G+S + +++ KA
Sbjct:  348 LAEEIRSVIKSNGGE--LTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSSVNFSSLRKA 516          
BLAST of CX671565 vs. ExPASy Swiss-Prot
Match: CP74_LINUS (Allene oxide synthase, chloroplastic OS=Linum usitatissimum GN=CYP74A PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.222e-36
Identity = 72/152 (47.37%), Postives = 106/152 (69.74%), Query Frame = -1
Query:  414 LQAKLRSEVK---EKCGTSALTFESVKSLELVQSVVCETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYES 860
            L  KL  E++   +  G   +T  +++ + L++SVV ETLR+ PPV LQ+ +A+KDF L S+++ Y +K+GE+L GYQP   +D K+FD  E F A+RF+GE G +L+ Y+ WSNGP+T TP+  NKQCAGKD+V + A L V  +F+RY+S
Sbjct:  362 LHTKLAQEIRSAIQSTGGGKVTMAAMEQMPLMKSVVYETLRIEPPVALQYGKAKKDFILESHEAAYQVKEGEMLFGYQPFATKDPKIFDRPEEFVADRFVGE-GVKLMEYVMWSNGPETETPSVANKQCAGKDFVVMAARLFVVELFKRYDS 512          
BLAST of CX671565 vs. ExPASy Swiss-Prot
Match: C74A4_ORYSJ (Allene oxide synthase 4 OS=Oryza sativa subsp. japonica GN=CYP74A4 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.810e-35
Identity = 79/159 (49.69%), Postives = 106/159 (66.67%), Query Frame = -1
Query:  402 LQAKLRSEVKEKC--GTSALTFESV-KSLELVQSVVCETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGS---ELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESITGN 860
            L AKL SEV+     G   +T  +V K + LV+SVV E LR+NPPV  Q+ RAR+D  + S+D+ Y+++KGELL GYQPL  RD KVFD A  F  +RF+   GS    LL ++ WSNGP+TGTP++ NKQC GKD V  V  L+VA +F+RY++   +
Sbjct:  323 LHAKLASEVRAAAPAGGGEITISAVEKEMPLVKSVVWEALRMNPPVEFQYGRARRDMVVESHDAAYEVRKGELLFGYQPLATRDEKVFDRAGEFVPDRFVSGAGSAARPLLEHVVWSNGPETGTPSEGNKQCPGKDMVVAVGRLMVAGLFRRYDTFAAD 481          
BLAST of CX671565 vs. ExPASy Swiss-Prot
Match: C74A2_PARAR (Allene oxide synthase OS=Parthenium argentatum GN=CYP74A2 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 5.823e-34
Identity = 67/149 (44.97%), Postives = 103/149 (69.13%), Query Frame = -1
Query:  414 LQAKLRSEVKEKCGTSALTFESVKSLELVQSVVCETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYES 860
            L  ++R  +K   G   +T E+++ + L +SVV E+LR+ PPVP Q+ +A+ +F + S+D+ +++KKGE+L GYQP   +D KVFD  E +  +RF+G+ G  LL Y++WSNGP+T +P   NKQCAGKD+V L+  L V  +F+RY+S
Sbjct:  303 LAEEIRGAIKSY-GDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGD-GEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDS 449          
BLAST of CX671565 vs. ExPASy Swiss-Prot
Match: C74A3_ORYSJ (Allene oxide synthase 3 OS=Oryza sativa subsp. japonica GN=CYP74A3 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.775e-33
Identity = 74/159 (46.54%), Postives = 104/159 (65.41%), Query Frame = -1
Query:  402 LQAKLRSEVKEKCGTS---ALTFESVKSLELVQSVVCETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFM--GEKGSE-LLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESITGN 860
            L AKL +EV+    T     +T  +V+ + LV+SVV E LR+NPPV  Q+  AR+D  + S+D+ Y+++KGE+L GYQPL  RD KVFD A  F A+RF+  G  G   LL ++ WSNGP+T  P++ NKQC GKD V  V  L+VA +F+RY++   +
Sbjct:  321 LHAKLATEVRATVPTGEDDGITLAAVERMPLVKSVVWEALRMNPPVEFQYGHARRDMVVESHDAAYEVRKGEMLFGYQPLATRDEKVFDRAGEFVADRFVAGGAAGDRPLLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTFAAD 479          
BLAST of CX671565 vs. ExPASy Swiss-Prot
Match: C74A2_ORYSJ (Allene oxide synthase 2 OS=Oryza sativa subsp. japonica GN=CYP74A2 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 6.438e-33
Identity = 76/167 (45.51%), Postives = 108/167 (64.67%), Query Frame = -1
Query:  372 LQAKLRSEVKEKCGTSALTFESVKSLELVQSVVCETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFD-DAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESIT---GNSSSITAVEKA 860
            L A++RS V +  G   +T  +++ +EL +SVV E LRL+PPV  Q+ RA+ D ++ S+D+ + IKKGE+L GYQP   RD +VF   A  F  +RF+GE+G +LL Y+YWSNG +T  P+  NKQC GK+ V LV  L++  +F RY++ T   G    IT V KA
Sbjct:  305 LAAEIRSAVADAGGN--VTLAALEKMELTRSVVWEALRLDPPVRFQYGRAKADLEIESHDASFAIKKGEMLFGYQPCATRDPRVFGATAREFVGDRFVGEEGRKLLQYVYWSNGRETENPSVDNKQCPGKNLVVLVGRLLLVELFLRYDTFTAEAGKKVVITGVTKA 469          
BLAST of CX671565 vs. ExPASy Swiss-Prot
Match: C74A1_ORYSJ (Allene oxide synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CYP74A1 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.873e-32
Identity = 68/171 (39.77%), Postives = 112/171 (65.50%), Query Frame = -1
Query:  372 LQAKLRSEVKEKCGTSALTFESVKSLELVQSVVCETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESI--------TGNSSSITAVEKA 860
            L  ++R  V++  G   +T +++  + LV+S V E LR+ PPV +Q+ RA++D  + S+D  Y++++GE+L GYQP+  +D +VF   E +  +RF+GE G+ LL ++ WSNGP+T  P   +KQCAGKD+V LVA L++  +F RY+S          G+S ++T+++KA
Sbjct:  342 LATEVRGAVRDNGGE--VTMKALAEMPLVKSAVYEALRIEPPVAMQYGRAKRDMVVESHDYGYEVREGEMLFGYQPMATKDPRVFARPEEYVPDRFLGEDGARLLRHVVWSNGPETAAPTLHDKQCAGKDFVVLVARLLLVELFLRYDSFDVEVGTSTLGSSVTVTSLKKA 510          
The following BLAST results are available for this feature:
BLAST of CX671565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CP74A_ARATH4.309e-3746.20Allene oxide synthase, chloroplastic OS=Arabidopsi... [more]
CP74_LINUS6.222e-3647.37Allene oxide synthase, chloroplastic OS=Linum usit... [more]
C74A4_ORYSJ1.810e-3549.69Allene oxide synthase 4 OS=Oryza sativa subsp. jap... [more]
C74A2_PARAR5.823e-3444.97Allene oxide synthase OS=Parthenium argentatum GN=... [more]
C74A3_ORYSJ3.775e-3346.54Allene oxide synthase 3 OS=Oryza sativa subsp. jap... [more]
C74A2_ORYSJ6.438e-3345.51Allene oxide synthase 2 OS=Oryza sativa subsp. jap... [more]
C74A1_ORYSJ1.873e-3239.77Allene oxide synthase 1, chloroplastic OS=Oryza sa... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_11G12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11G12-N23-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671565 ID=CX671565; Name=CX671565; organism=Citrus sinensis; type=EST; length=860bp
TTTTTTTTTTTTTTTTTAAGAAATGAGAACATACATAAAATATCAGAGAT
AGATACAAAAAAATTAGTCCCCTCCCCATTAGCATCCCTAGTGACCATAA
ATAAACTCAAGTCATTCATAAAAAAAAAAGTAATGGGAAAGATGGAGCGA
CCCGCGTCGCACCATAAATATCATCCATGAAACTTTTTTATTCATTCACC
CGTTCGTTACTACTAACATCCAAGGGAACCGGTGGGACCCATCTCTACAT
TACTTTCTCTATTAACAACCAAACCAGACAAACGTTACAACTCGACATTA
CGTTCACGATCCATCACCGTCATACGACCCCATTCACGTGATGATGCTCA
CGTTCAAAATCACCATCACTTGGCCTTTTCAACGGCCGTGATCGAAGATG
AGTTCCCAGTAATAGACTCGTACCTTTGGAACACATAAGCCACGATCAAA
CAAGCAACGAGAGTCACGTAATCCTTTCCGGCACACTGCTTGTTCATGTC
ATTGGGAGTCCCCGTCTGTGGCCCATTTGACCAATACAAGTAACTCAACA
ACTCGCTGCCCTTTTCGCCCATAAACCTCTCAGCCTTAAAACTCTCAGCA
TCGTCAAACACCTTCGAATCCCTCATGACCAAAGGCTGATACCCGCAAAG
CAACTCACCTTTCTTGATATCGTACACCGAGTCGTACGAGCTCAGTTGGA
AGTCCTTCCTTGCCCTTGCAAACTGGAGAGGAACCGGTGGGTTAAGTCTC
AGAGTTTCGCAGACCACAGACTGAACCAACTCTAGACTCTTGACTGACTC
AAAAGTCAAGGCGGATGTCCCACATTTCTCTTTCACTTCACTTCTTAACT
TTGCCTGCAA
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