EY664396

Overview
NameEY664396
Unique NameEY664396
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7923 contig Csv1_Contig7923:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY664396 vs. ExPASy Swiss-Prot
Match: YJ72_SCHPO (Uncharacterized protein C757.02c OS=Schizosaccharomyces pombe GN=SPCC757.02c PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.329e-12
Identity = 50/171 (29.24%), Postives = 80/171 (46.78%), Query Frame = 1 
Query:  313 LSQLTDVTHIFYTTWASSPTEVENCQINGAMLRNVLHSV-IPSAPNLRHICLVTGAKHYLGPFEVATRRMKSHPLEPPFTEDLPRLNMPNFYYTQEDILFEEVEKREGLTWSVHRPHLVFGFSPYSLMNVVGTLCVYAALCKHEXIPLLFPGTKDCWGSFSVASDAXLIAE 822
            L  +  + + ++  +     E + C++NG MLRN + ++ + S   LR + L TG K Y          M    +  P T        PNFYY QEDIL +E    +   +++  P+ + G S  S MN   T+ +YA +C+    P  FPG +  +  F   S + LIA+
Sbjct:   70 LEGVKGINYAYFAAYKEENNEEKLCEVNGNMLRNFVQALELTSIQTLRRVILTTGLKFYGLHLGEVRLPMIETDIRVPETFS----GTPNFYYVQEDIL-KEFSNGKKWDYTIAMPNDICGVSKGSYMNEAFTIALYALVCRELHEPFRFPGNEKFYLGFDDISYSKLIAD 235
The following BLAST results are available for this feature:
BLAST of EY664396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YJ72_SCHPO1.329e-1229.24Uncharacterized protein C757.02c OS=Schizosaccharo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-066-B06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664396 ID=EY664396; Name=EY664396; organism=Citrus sinensis; type=EST; length=887bp
CAATCTTTTCTAGTTACTGTAGTTGACGCCTCCTGAAAGAGAAGTAAAAA
AATGAGCTGGTGGTGGGCAGGTGCAATTGGCGCTGCTAAGAAGAAACTGG
GAGAAGATGATGAGCGAAACGTGGGACTTGTAATAGGTGTGACAGGAATA
TTAGGCAACAGCCTTGCTGAGATTTTGCCTCGGCCAGATACTCCTGGGGG
TCCATGGAAGGTTTACGGAGTGGCCCGACGTCCCAGGCCTCACTGGAACG
CTGACCACCCGATTGAGTACATCCAATGCGACGTCTCCGACCCTCAACAG
ACACAAACCAAGCTCTCACAACTCACTGACGTCACCCACATCTTCTACAC
GACGTGGGCCAGCAGTCCCACTGAAGTCGAGAACTGCCAGATCAACGGTG
CCATGCTTCGTAACGTGCTCCACTCTGTAATCCCGAGCGCGCCTAATCTC
CGCCACATTTGTCTGGTAACGGGCGCAAAACATTACTTGGGACCATTCGA
GGTGGCAACTCGCAGGATGAAGTCTCACCCTCTCGAGCCGCCTTTTACTG
AGGATTTACCAAGGTTAAATATGCCAAATTTTTACTACACCCAGGAAGAC
ATATTGTTTGAAGAAGTTGAAAAACGGGAGGGTTTGACTTGGTCCGTACA
CCGTCCTCATTTAGTATTTGGATTTTCACCGTACAGTTTGATGAATGTTG
TCGGGACTCTCTGTGTGTACGCAGCCTTATGTAAACATGAANGTATTCCG
TTATTATTTCCCGGGACTAAAGATTGTTGGGGAAGCTTCTCGGTTGCTTC
GGACGCANACTTGATTGCCGAGCACAAATCTGGGCGGTAGTGGATCCTNG
CGCAAGAAACGAGCCCTTTATTGCAGCACGGAGATGT
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