EY664395

Overview
NameEY664395
Unique NameEY664395
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664395 vs. ExPASy Swiss-Prot
Match: PHOT1_ARATH (Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=1 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 5.958e-72
Identity = 161/264 (60.98%), Postives = 183/264 (69.32%), Query Frame = 1
Query:    4 RVRVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKRQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMXXXXXXXXXXXXXX--SVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSXLELTEYSREEILGRNCRFXXXXXXXXXXXXXXXXN*HQTDELCSSLLH--KSGKKFW 783
            +V VSKHTEGAK+K LRPNGLPESLIRYDARQK+MAT+SVTELV+A+K+PR+LSESTN  P + KSE    +E      RR SENV P  R + GGG R SMQRI+E+PEKK +KS   SFMG I +KS+S D+  S ++  I                 SVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDS LELTEYSREEILGRNCRF                      E+   L++  KSGKKFW
Sbjct:  297 QVEVSKHTEGAKEKALRPNGLPESLIRYDARQKDMATNSVTELVEAVKRPRALSESTNLHPFMTKSES---DELPKKPARRMSENVVPSGRRNSGGGRRNSMQRINEIPEKKSRKSSL-SFMG-IKKKSESLDE--SIDDGFIEYGEEDDEISDRDERPESVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDLTTVKKIRNAIDNQTEVTVQLINYTKSGKKFW 553          
BLAST of EY664395 vs. ExPASy Swiss-Prot
Match: PHOT2_ARATH (Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.699e-40
Identity = 111/263 (42.21%), Postives = 138/263 (52.47%), Query Frame = 1
Query:    4 RVRVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRS-LSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKRQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMXXXXXXXXXXXXXXSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSXLELTEYSREEILGRNCRFXXXXXXXXXXXXXXXXN*HQTDELCSSLLH--KSGKKFW 783
            +V VSK+TEG  DK LRPNGL +SLIRYDARQKE A  S+TE+VQ ++  +S + ES +   +++                  S   P P R +          R S+   K  +  GR S       KS +    D    E                  + D  R++++R+GIDLATTLERIEKNFVI+DPRLPDNPIIFASDS LELTEYSREEILGRNCRF                      E+   L++  KSGKKFW
Sbjct:  233 QVEVSKYTEGVNDKALRPNGLSKSLIRYDARQKEKALDSITEVVQTIRHRKSQVQESVSNDTMVKPD----------------SSTTPTPGRQT----------RQSDEASKSFRTPGRVSTPTGSKLKSSNNRHEDLLRMEPEELMLSTEVIGQRDSWDLSD--RERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDQATVQKIRDAIRDQREITVQLINYTKSGKKFW 467          
The following BLAST results are available for this feature:
BLAST of EY664395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PHOT1_ARATH5.958e-7260.98Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=... [more]
PHOT2_ARATH2.699e-4042.21Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-066-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664395 ID=EY664395; Name=EY664395; organism=Citrus sinensis; type=EST; length=913bp
CCACGCGTCCGGGTGAGCAAGCATACAGAGGGGGCCAAGGATAAGATGCT
GCGTCCTAATGGATTGCCCGAGTCGTTGATTCGATACGATGCTCGGCAGA
AGGAGATGGCTACAAGTTCAGTGACCGAACTAGTACAAGCAATGAAGAAA
CCTCGGTCACTCAGCGAATCAACAAATCGTCCTCCCATCATAAGAAAATC
AGAAGGTGGTGTTGAAGAAGAAAGAGCAGGAGCTCTGGGAAGGAGAAAAT
CTGAAAATGTCCCTCCTCCTCGACGCAATTCGTATGGTGGCGGCTGTAGA
ACTTCCATGCAGCGTATCAGTGAAGTCCCCGAAAAGAAAAGACAAAAATC
CGGCCGTCGTTCTTTTATGGGGCTTATTGGCAGGAAGAGTCAATCTACGG
ATGATCACGATAGCTTTGAAAATGAAATAATTATGGAAGGTGATGACGAC
TATGAGAGTGATGATGAGAGACCAGATAGTGTTGATGACAAAGTGAGGCA
AAAGGAAATGAGAAAGGGTATCGATTTGGCTACTACACTCGAACGTATTG
AGAAAAACTTTGTCATTACTGATCCAAGACTGCCTGATAATCCCATTATT
TTTGCATCTGATAGCTNCTTGGAGCTGACAGAGTACAGCCGTGAAGAAAT
CTTGGGGAGAAATTGCAGGTTTCTCAAAGCCCTGAAACTGATCCTGCTAC
TGTGAGGAAAATAGGGCGGCAATTGACATCAGACTGATGAACTGTGCAGC
TCTTTACTACACAAAAGCGGGAAGAAGTTCTGGATCTGTTCCATTGCAGC
TTGCGTGACAAAAGGAGAGTGCAGTTTCATTGGAGGCATTGATGGTGCGA
GCCCTTGACCTTACAACATTTTCAAAGGTCTGTGAAAAAGTAAAACGGGG
AACAACGGCAAAT
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