EY664393

Overview
NameEY664393
Unique NameEY664393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:1015..1604. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664393 vs. ExPASy Swiss-Prot
Match: PAPA5_CARPA (Cysteine proteinase (Fragment) OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.214e-24
Identity = 45/54 (83.33%), Postives = 51/54 (94.44%), Query Frame = 3
Query:    3 LDLGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 164
            L+ GVL+VGYGS+G+APIR KEKPYW+IKNSWGENWGENGYYKIC GRN+CGVD
Sbjct:   29 LNHGVLLVGYGSAGYAPIRLKEKPYWVIKNSWGENWGENGYYKICRGRNICGVD 82          
BLAST of EY664393 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.172e-22
Identity = 43/54 (79.63%), Postives = 50/54 (92.59%), Query Frame = 3
Query:    3 LDLGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 164
            L+ GVL+VGYG++G+AP RFKEKPYWIIKNSWGE WGENG+YKIC GRN+CGVD
Sbjct:  300 LNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVD 353          
BLAST of EY664393 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.999e-22
Identity = 47/57 (82.46%), Postives = 50/57 (87.72%), Query Frame = 3
Query:    3 LDLGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVD 164
            LD GVL+VGYG+SGFAPIR K+KPYWIIKNSWGENWGENGYYKIC G   RN CGVD
Sbjct:  301 LDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVD 357          
BLAST of EY664393 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.816e-22
Identity = 43/54 (79.63%), Postives = 47/54 (87.04%), Query Frame = 3
Query:    3 LDLGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 164
            LD GVL+VG+G   +APIR KEKPYWIIKNSWG+NWGE GYYKIC GRNVCGVD
Sbjct:  297 LDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVD 350          
BLAST of EY664393 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.692e-21
Identity = 42/54 (77.78%), Postives = 49/54 (90.74%), Query Frame = 3
Query:    3 LDLGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 164
            L+ GVL+VGYGS+GF+  R KEKPYWIIKNSWGE+WGENG+YKIC GRN+CGVD
Sbjct:  297 LNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVD 350          
BLAST of EY664393 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.436e-12
Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 3
Query:    3 LDLGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 161
            LD GVL+VGYG S + P   K  PYWI+KNSWG  WGE GYY++  G N CGV
Sbjct:  553 LDHGVLVVGYGVSDY-PNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGV 604          
The following BLAST results are available for this feature:
BLAST of EY664393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PAPA5_CARPA6.214e-2483.33Cysteine proteinase (Fragment) OS=Carica papaya PE... [more]
RD19A_ARATH1.172e-2279.63Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CYSP1_MAIZE1.999e-2282.46Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP_PEA5.816e-2279.63Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
A494_ARATH1.692e-2177.78Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CPR1_DROME1.436e-1260.38Putative cysteine proteinase CG12163 OS=Drosophila... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-066-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664393 ID=EY664393; Name=EY664393; organism=Citrus sinensis; type=EST; length=590bp
ATTTGGATCTTGGAGTGCTTATCGTGGGCTATGGATCTTCAGGTTTCGCC
CCGATCCGTTTCAAGGAGAAGCCTTACTGGATCATAAAGAACTCCTGGGG
AGAGAACTGGGGAGAGAATGGATATTATAAGATCTGCATGGGTCGCAATG
TCTGTGGGGTCGACTCCATGGTCTCATCTGTAGCTGCTGTCCATACAACC
TCAAGCTAGACATTATGGAGGTTGTTCTAGGCAAGTGGAGCTTATATACG
AAGATATTATAGGATATCCTTTTAAATAGCCGTCTGCAATTATAAGGATG
CCTACATGCGTGGGCTGAGGCATGAACTTTATATGCTCTTGTAATATTTA
AGCATATGTCATGTCAGAATGTAATATTTATCCATTTTATAGTTAACCAT
GCTACAGAATTGTTATTGAAGATGGTATTAATATTTTCTTTTTATATTGG
GCAGGCTTGTAGAAATATTATAATGTTATATTTTCTTTTTATGTAACTCA
AAATAGTAGAACTTCACGTATGCTTAGACGCTTGTATTTTCTTATTATAT
TTGAAGTTAGCTCTATTTAGCTCTGTTCATTNNNNAAAAA
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