EY664388

Overview
NameEY664388
Unique NameEY664388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7533 contig Csv1_Contig7533:14..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664388 vs. ExPASy Swiss-Prot
Match: ERD22_CAEEL (Putative ER lumen protein retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.167e-23
Identity = 60/172 (34.88%), Postives = 100/172 (58.14%), Query Frame = 3
Query:  231 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN-RIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWV 731
            N+F ++A+  H + I +L+ K+ K ++C+G+S +SQ L A+    R   L+ +++  Y+                +Y++ F  RS+YM + D F +  ++VP A+LALLI+    H+     + W F +YLEAV++LPQL ++Q+T   E  TAHY+FALG  R L   +W+
Sbjct:    2 NIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYNTTMKITFLAATYA--TVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLIN----HDFAPFELLWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFALGSYRALYIFNWI 167          
BLAST of EY664388 vs. ExPASy Swiss-Prot
Match: ERD2_CAEEL (ER lumen protein retaining receptor OS=Caenorhabditis elegans GN=erd-2 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.431e-21
Identity = 58/169 (34.32%), Postives = 92/169 (54.44%), Query Frame = 3
Query:  231 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXW-VIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWV 731
            NLF   A+  H+I I VL+ K+ K ++C G+S +SQ L A+    R    F   +  +            +  +Y++    +++Y  + D+F I ++V+P  +LALLI+      I   + W F +YLEAV+++PQL ++  T   E  TAHY+FALG  RFL   +WV
Sbjct:    2 NLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYNTAMKIFYLVASFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLINHEF---IFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYILNWV 167          
BLAST of EY664388 vs. ExPASy Swiss-Prot
Match: ERD2_CAEBR (ER lumen protein retaining receptor OS=Caenorhabditis briggsae GN=erd-2 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.304e-20
Identity = 54/169 (31.95%), Postives = 92/169 (54.44%), Query Frame = 3
Query:  231 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXX-WVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWV 731
            N+F + A+  H++ I +L+ K+ K ++C G+S +SQ L A+    R    F   Y ++               +Y++    +++Y  + D F I ++V+P  +LAL+I+      +   + W F +YLEAV+++PQL ++  T   E  TAHY+FALG  RFL   +WV
Sbjct:    2 NIFRITADLAHAVAIVILLLKIWKSRSCEGISGRSQILFAVTFFTRYLDLFTSFYSLYNTVMKVLFLAGSIGTVYLMWVKFKATYDRNNDTFRIEFLVIPSIILALIINHEF---MFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYIFNWV 167          
BLAST of EY664388 vs. ExPASy Swiss-Prot
Match: ERD2_DROME (ER lumen protein retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.905e-20
Identity = 59/189 (31.22%), Postives = 105/189 (55.56%), Query Frame = 3
Query:  231 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGL 785
            N+F  A +  H   I +L+ K+ K ++CAG+S KSQ L A+    R   L+ ++V  Y+                +Y++    +++Y  + D+F I +++VPCA+L+L+I+   +   +  + W F +YLE+V++LPQL ++  T   E  T+HY+FALG  R L   +WV + +    + L+A+  G+
Sbjct:    2 NIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYN--SVMKVLFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFT---VMEVLWTFSIYLESVAILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESHYDLIAIFAGV 185          
BLAST of EY664388 vs. ExPASy Swiss-Prot
Match: ERD2_ENTHI (ER lumen protein retaining receptor OS=Entamoeba histolytica GN=ERD2 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.955e-20
Identity = 62/212 (29.25%), Postives = 104/212 (49.06%), Query Frame = 3
Query:  231 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXX-WVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLW-PSMVLISXIAKLSSSGLLFYYVK 857
            NLF ++A+ VH + I  L+ K++  K C G+SL+SQ L  I    R    F   Y ++             + IY+I    R++Y +  D   ++Y++VPC VLA +    T    +  I W F ++LEAV++LPQ+ ++++T  VE   + Y+F LG+ R L   +W+ +    + +         W P   +   I  L      +YY+K
Sbjct:    4 NLFRISADLVHLLSIYFLLTKIISHKNCIGISLRSQILFFIVWVTRYLDIFYNFYSLYNTILKIVYLTTSAYTIYLISKRFRATYDKIHDTLNVWYLIVPCIVLAFIF---TEDYSITEICWTFSIFLEAVAILPQILLLRSTGEVENLNSQYIFCLGLYRALYIINWIYRYATEQSY---------WSPLTWICGSIQTLLYVEYFYYYIK 203          
BLAST of EY664388 vs. ExPASy Swiss-Prot
Match: ERD2_PETHY (ER lumen protein retaining receptor OS=Petunia hybrida GN=ERD2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.452e-20
Identity = 56/173 (32.37%), Postives = 96/173 (55.49%), Query Frame = 3
Query:  231 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFN--LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWV 731
            N+F +A +  H   + VL+ K+   K+CAG+SLK+QEL A+    R   ++  F+  Y+               +++ +R +  +R SY +D+D F   ++V+PC +LAL+I+   +      + W F +YLEAV++LPQL ++Q T+ ++  T  Y+F LG  R     +WV
Sbjct:    2 NIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFVTRYLDIFTDFISLYNTTMKLVFLGSSLS--IVWYMRHHKIVRRSYDKDQDTFRHLFLVLPCLLLALVINEKFT---FKEVMWTFSIYLEAVAILPQLVLLQRTRNIDNLTGQYIFLLGAYRSFYILNWV 169          
BLAST of EY664388 vs. ExPASy Swiss-Prot
Match: ERD2_SCHPO (ER lumen protein retaining receptor OS=Schizosaccharomyces pombe GN=erd2 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.104e-19
Identity = 61/181 (33.70%), Postives = 99/181 (54.70%), Query Frame = 3
Query:  249 EAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYD--IHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGL 785
            +  H   I +L++++ K KTC+GLSLKS  L  +    R Y +    Y    +            ++ Y++   LR +Y +  D F   Y++  CAVLAL I+P TS+ I N I W F ++LE+V++LPQL ++Q +   E  TAHY+FA+ + R L   HW+ ++   +  + VA+  G+
Sbjct:    9 DMAHLAAIFLLLHRMKKSKTCSGLSLKSHLLFLLVYVTR-YLNLFWRYKSLYYFLMRIVFIASESYICYLMLMTLRPTYDKRLDTFRTEYILGGCAVLAL-IYP-TSYTISN-ILWTFSIWLESVAILPQLFMLQRSGETESLTAHYLFAMCLYRGLYIPHWIYRIAVHKKVIGVAILAGI 185          
BLAST of EY664388 vs. ExPASy Swiss-Prot
Match: ERD2_ARATH (ER lumen protein retaining receptor OS=Arabidopsis thaliana GN=ERD2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.212e-19
Identity = 66/219 (30.14%), Postives = 111/219 (50.68%), Query Frame = 3
Query:  231 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFN--LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISXIAKLSSSGLLFYYVKCLWR 869
            N+F  A +  H I + +L+ K+   K+CAG+SLK+QEL A+    R   L+  +V  Y+               +++ +R +  +R SY +D D F   YVV+ C VL L+++   +   +  +FWAF +YLEAV++LPQL ++Q +  V+  T  YV  LG  R L   +W+ +   +  H      +  W  +  +S + + +     FYY    W+
Sbjct:    2 NIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYN--SIMKIVFIASSLAIVWCMRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILNEKFT---VQEVFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVVFLGAYRGLYIINWIYRYF-TEDH------FTRW--IACVSGLVQTALYADFFYYYYISWK 206          
BLAST of EY664388 vs. ExPASy Swiss-Prot
Match: ERD21_XENTR (ER lumen protein retaining receptor 1 OS=Xenopus tropicalis GN=kdelr1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.212e-19
Identity = 61/180 (33.89%), Postives = 96/180 (53.33%), Query Frame = 3
Query:  258 HSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGL 785
            H   I +L+ K+ K ++CAG+S KSQ L AI    R   L+ +F+  Y+                I+MI    +++Y  + D F + +++VP A+LA L+ H  T   IL    W F +YLE+V++LPQL ++  T   E  T+HY+FALG+ R L   +W+ +        L+A+  GL
Sbjct:   12 HLSAILILLLKIWKSRSCAGISGKSQLLFAIVFTTRYLDLFTNFISLYNTSMKMVYVASSYA--TIWMIYSKFKATYDGNHDTFRVEFLIVPTAILAFLVNHDFTPLEIL----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGIYRALYLFNWIWRYQFEGFFDLIAIVAGL 185          
BLAST of EY664388 vs. ExPASy Swiss-Prot
Match: ERD21_RAT (ER lumen protein retaining receptor 1 OS=Rattus norvegicus GN=Kdelr1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.212e-19
Identity = 60/172 (34.88%), Postives = 94/172 (54.65%), Query Frame = 3
Query:  231 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWV 731
            NLF    +  H + I +L+ K+ K ++CAG+S KSQ L A+    R   L+ +++  Y+                ++MI    +++Y  + D F + ++VVP AVLA L+ H  T   IL    W F +YLE+V++LPQL ++  T   E  T+HY+FALGV R L   +W+
Sbjct:    2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNT--CMKVVYIACSFTTVWMIYSKFKATYDGNHDTFRVEFLVVPTAVLAFLVNHDFTPLEIL----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWI 167          
The following BLAST results are available for this feature:
BLAST of EY664388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
ERD22_CAEEL8.167e-2334.88Putative ER lumen protein retaining receptor C28H8... [more]
ERD2_CAEEL3.431e-2134.32ER lumen protein retaining receptor OS=Caenorhabdi... [more]
ERD2_CAEBR1.304e-2031.95ER lumen protein retaining receptor OS=Caenorhabdi... [more]
ERD2_DROME2.905e-2031.22ER lumen protein retaining receptor OS=Drosophila ... [more]
ERD2_ENTHI4.955e-2029.25ER lumen protein retaining receptor OS=Entamoeba h... [more]
ERD2_PETHY8.452e-2032.37ER lumen protein retaining receptor OS=Petunia hyb... [more]
ERD2_SCHPO1.104e-1933.70ER lumen protein retaining receptor OS=Schizosacch... [more]
ERD2_ARATH3.212e-1930.14ER lumen protein retaining receptor OS=Arabidopsis... [more]
ERD21_XENTR3.212e-1933.89ER lumen protein retaining receptor 1 OS=Xenopus t... [more]
ERD21_RAT3.212e-1934.88ER lumen protein retaining receptor 1 OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-066-A10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664388 ID=EY664388; Name=EY664388; organism=Citrus sinensis; type=EST; length=880bp
CAATCGGAAACTCAATTGTCTCGCTCTCTCTAATTACATCTCACTTTCTC
GCACTTTCTCGCACTTTCCGGGAAAATATTTTTAGACCGCTCATGAGGGC
GCCGAAGAGGCCGATCCACGCGGTTTCGACATGGGTCCGGCGACAGCCGC
CGAAAGTGAAGGCATTTTTGGCGGTGGTCTCCGGCATGGCAGCGCTGGTT
TTGCTCCGATTCATTGTACACGACCACGATAACCTCTTCGTTGCTGCCGA
GGCCGTGCACTCCATTGGAATCTCCGTGTTAATATACAAGCTCATGAAAG
AGAAAACTTGTGCTGGACTGTCACTCAAATCCCAGGAACTAACAGCTATT
TTCTTAGCTGTGAGGCTATACTGTAGTTTTGTGATGGAATACGATATACA
CACCCTACTGGATTTAGCTACTTTGGCTACGACCCTTTGGGTTATTTATA
TGATCCGTTTCAATCTAAGGTCTAGTTACATGGAGGACAAGGACAACTTT
GCAATATATTATGTGGTGGTACCCTGTGCAGTATTGGCTCTGTTAATTCA
TCCATCGACTTCGCATAATATATTGAATAGAATTTTCTGGGCATTCTGTG
TTTATCTGGAAGCTGTTTCAGTACTGCCCCAGTTGCGGGTGATGCAGAAC
ACAAAGATTGTTGAACCATTCACAGCCCATTATGTATTTGCGCTTGGTGT
TGCGAGGTTTTTGAGCTGTGCCCACTGGGTTCTNCAGGTTCTGGATAGTC
GTGGACACTTGCTGGTAGCCCTGGGCTATGGATTGTGGCCTTCGATGGTG
CTTATCTCANAGATTGCCAAACTTTCATCTAGCGGACTTCTGTTCTACTA
TGTAAAGTGTCTTTGGCGACAGCTAGTCTC
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