CX671415

Overview
NameCX671415
Unique NameCX671415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5053 contig Csv1_Contig5053:360..1092. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671415 vs. ExPASy Swiss-Prot
Match: TGA21_TOBAC (TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum GN=TGA21 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.825e-58
Identity = 116/132 (87.88%), Postives = 120/132 (90.91%), Query Frame = -2
Query:  337 ERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 732
            ERCFMWIGGFR SELLKLLVNQLEPLTEQQL GIYNLQQSS QAEDALSQGM+ALQQSLAETLAN         G+VANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHR+LTTRQSARALLAIN+YF
Sbjct:  306 ERCFMWIGGFRPSELLKLLVNQLEPLTEQQLAGIYNLQQSSHQAEDALSQGMEALQQSLAETLANGSPAPEGSSGDVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRVLTTRQSARALLAINEYF 437          
BLAST of CX671415 vs. ExPASy Swiss-Prot
Match: HBP1C_WHEAT (Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.137e-53
Identity = 111/132 (84.09%), Postives = 116/132 (87.88%), Query Frame = -2
Query:  337 ERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 732
            ERCFMW+GGFRSSELLKLL  QLEPLTEQQL GI NLQQSSQQAEDALSQGM+ALQQSLAETLA+         GNVA+YMGQMAMAMGKLGTLE FLRQADNLR QTLQQM RILTTRQSARALLAI+DYF
Sbjct:  329 ERCFMWLGGFRSSELLKLLAGQLEPLTEQQLTGICNLQQSSQQAEDALSQGMEALQQSLAETLASGSLGPAGSSGNVASYMGQMAMAMGKLGTLENFLRQADNLRLQTLQQMQRILTTRQSARALLAISDYF 460          
BLAST of CX671415 vs. ExPASy Swiss-Prot
Match: TGA2_ARATH (Transcription factor TGA2 OS=Arabidopsis thaliana GN=TGA2 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.007e-51
Identity = 104/132 (78.79%), Postives = 119/132 (90.15%), Query Frame = -2
Query:  337 ERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 732
            ERCF+W+GGFRSSELLKLL NQLEP+TE+QL+GI NLQQ+SQQAEDALSQGM++LQQSLA+TL++         GNVA+YMGQMAMAMGKLGTLEGF+RQADNLR QTLQQM R+LTTRQSARALLAI+DYF
Sbjct:  184 ERCFLWLGGFRSSELLKLLANQLEPMTERQLMGINNLQQTSQQAEDALSQGMESLQQSLADTLSS-GTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTLQQMIRVLTTRQSARALLAIHDYF 314          
BLAST of CX671415 vs. ExPASy Swiss-Prot
Match: HBP1B_WHEAT (Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.007e-50
Identity = 108/132 (81.82%), Postives = 113/132 (85.61%), Query Frame = -2
Query:  340 ERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLA-NXXXXXXXXXGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDY 732
            ERCF+W+GGFR SELLKLL  QLEPLTEQQL GI NLQQSSQQAEDALSQGM+ALQQSLAETLA +         GNVANYMGQMAMAMGKLGTLE FL QADNLRQQTLQQM RILTTRQSARALL I+DY
Sbjct:  184 ERCFLWLGGFRPSELLKLLSTQLEPLTEQQLSGICNLQQSSQQAEDALSQGMEALQQSLAETLAGSIGSSGSGSTGNVANYMGQMAMAMGKLGTLENFLSQADNLRQQTLQQMQRILTTRQSARALLVISDY 315          
BLAST of CX671415 vs. ExPASy Swiss-Prot
Match: TGA6_ARATH (Transcription factor TGA6 OS=Arabidopsis thaliana GN=TGA6 PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.101e-48
Identity = 99/131 (75.57%), Postives = 117/131 (89.31%), Query Frame = -2
Query:  340 ERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDY 732
            ERCF+W+GGFRSSELLKLL NQLEP+TE+Q++GI +LQQ+SQQAEDALSQGM++LQQSLA+TL++          NVA+YMGQMAMAMG+LGTLEGF+RQADNLR QTLQQM R+LTTRQSARALLAI+DY
Sbjct:  184 ERCFLWLGGFRSSELLKLLANQLEPMTERQVMGINSLQQTSQQAEDALSQGMESLQQSLADTLSS-GTLGSSSSDNVASYMGQMAMAMGQLGTLEGFIRQADNLRLQTLQQMLRVLTTRQSARALLAIHDY 313          
BLAST of CX671415 vs. ExPASy Swiss-Prot
Match: TGA5_ARATH (Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.590e-47
Identity = 100/131 (76.34%), Postives = 114/131 (87.02%), Query Frame = -2
Query:  340 ERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDY 732
            ERCF+W+GGFRSSELLKL+ +QLEPLTEQQ + I NLQQSSQQAEDALSQGMD LQQSLA+TL++         GNVA+YMGQMAMAMGKLGTLEGF+RQADNLR QT QQM R+LTTRQSARALLA+++Y
Sbjct:  184 ERCFLWLGGFRSSELLKLIASQLEPLTEQQSLDINNLQQSSQQAEDALSQGMDNLQQSLADTLSS-GTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTYQQMVRLLTTRQSARALLAVHNY 313          
BLAST of CX671415 vs. ExPASy Swiss-Prot
Match: TGA4_ARATH (Transcription factor TGA4 OS=Arabidopsis thaliana GN=TGA4 PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.707e-33
Identity = 75/132 (56.82%), Postives = 96/132 (72.73%), Query Frame = -2
Query:  337 ERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 732
            ER F+WIGGFR SELLK+L+   +PLT+QQL+ + NL+QS QQAEDALSQGM+ LQ +LAE++A              +Y+ QM  AM +L  L  F+ QAD+LR +TLQQMHRILTTRQ+AR LLA+ +YF
Sbjct:  222 ERFFLWIGGFRPSELLKVLLPHFDPLTDQQLLDVCNLRQSCQQAEDALSQGMEKLQHTLAESVA-------AGKLGEGSYIPQMTCAMERLEALVSFVNQADHLRHETLQQMHRILTTRQAARGLLALGEYF 346          
BLAST of CX671415 vs. ExPASy Swiss-Prot
Match: TGA7_ARATH (Transcription factor TGA7 OS=Arabidopsis thaliana GN=TGA7 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.229e-33
Identity = 77/131 (58.78%), Postives = 95/131 (72.52%), Query Frame = -2
Query:  340 ERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDY 732
            ER F WIGGFR SELL +++  L+PLT+QQ++ + NLQQSSQQAEDALSQG+D LQQSLAE++               +Y   MA A+  L  LEGF+ QAD+LRQQTLQQM +ILTTRQSAR LLA+ +Y
Sbjct:  225 ERFFQWIGGFRPSELLNVVMPYLQPLTDQQILEVRNLQQSSQQAEDALSQGIDKLQQSLAESIV------IDAVIESTHYPTHMAAAIENLQALEGFVNQADHLRQQTLQQMAKILTTRQSARGLLALGEY 349          
BLAST of CX671415 vs. ExPASy Swiss-Prot
Match: TGA3_ARATH (Transcription factor TGA3 OS=Arabidopsis thaliana GN=TGA3 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.965e-33
Identity = 76/132 (57.58%), Postives = 94/132 (71.21%), Query Frame = -2
Query:  337 ERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 732
            ER F WIGGFR SELL +++  +EPLT+QQL+ + NLQQSSQQAE+ALSQG+D LQQ L E++A              N+   MA AM  L  LE F+ QAD+LRQQTLQQM +ILTTRQ+AR LLA+ +YF
Sbjct:  240 ERFFQWIGGFRPSELLNVVMPYVEPLTDQQLLEVRNLQQSSQQAEEALSQGLDKLQQGLVESIA-----IQIKVVESVNHGAPMASAMENLQALESFVNQADHLRQQTLQQMSKILTTRQAARGLLALGEYF 366          
BLAST of CX671415 vs. ExPASy Swiss-Prot
Match: TGA1_ARATH (Transcription factor TGA1 OS=Arabidopsis thaliana GN=TGA1 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.711e-30
Identity = 69/132 (52.27%), Postives = 94/132 (71.21%), Query Frame = -2
Query:  337 ERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDALQQSLAETLANXXXXXXXXXGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 732
            ER F+WIGGFR S+LLK+L+   + LT+QQL+ + NL+QS QQAEDAL+QGM+ LQ +LA+ +A              +Y+ Q+  AM +L  L  F+ QAD+LR +TLQQM+RILTTRQ+AR LLA+ +YF
Sbjct:  226 ERFFLWIGGFRPSDLLKVLLPHFDVLTDQQLLDVCNLKQSCQQAEDALTQGMEKLQHTLADCVA-------AGQLGEGSYIPQVNSAMDRLEALVSFVNQADHLRHETLQQMYRILTTRQAARGLLALGEYF 350          
The following BLAST results are available for this feature:
BLAST of CX671415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
TGA21_TOBAC5.825e-5887.88TGACG-sequence-specific DNA-binding protein TGA-2.... [more]
HBP1C_WHEAT1.137e-5384.09Transcription factor HBP-1b(c1) (Fragment) OS=Trit... [more]
TGA2_ARATH9.007e-5178.79Transcription factor TGA2 OS=Arabidopsis thaliana ... [more]
HBP1B_WHEAT2.007e-5081.82Transcription factor HBP-1b(c38) OS=Triticum aesti... [more]
TGA6_ARATH1.101e-4875.57Transcription factor TGA6 OS=Arabidopsis thaliana ... [more]
TGA5_ARATH1.590e-4776.34Transcription factor TGA5 OS=Arabidopsis thaliana ... [more]
TGA4_ARATH1.707e-3356.82Transcription factor TGA4 OS=Arabidopsis thaliana ... [more]
TGA7_ARATH2.229e-3358.78Transcription factor TGA7 OS=Arabidopsis thaliana ... [more]
TGA3_ARATH4.965e-3357.58Transcription factor TGA3 OS=Arabidopsis thaliana ... [more]
TGA1_ARATH6.711e-3052.27Transcription factor TGA1 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10H09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10H09-O18-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671415 ID=CX671415; Name=CX671415; organism=Citrus sinensis; type=EST; length=733bp
TTTTTTTCTCAATTCTAACAAACATCAAGCATTACCAGATTATTAGCACT
ATTTTACAACACAATAAGCATACAAAACCTAAATGAACATATCTAAAGCT
ACAGGTATAGATGGAACCTATAAATACAGCAAATGTGAGCCATTCCATTG
CTCCTTAACGATATAGAACAGAGGAGCTCTAACCAGTATTAATTTGTATT
GTCACTGCAGAAACTTGTGGTTATAATTTAATCATCTACCAAGTCATATA
CCCTTCAGAATAACTTTTTGAAGAGGAACTGTCTCTCACTCCCGTGGCCG
GGCCAGCCAGAGAGAACTGAGGGCTCTAAGCCTAGAGAAGTAATCATTTA
TTGCGAGCAACGCACGAGCTGATTGTCGGGTGGTCAATATACGATGCATC
TGTTGTAGAGTTTGCTGACGTAGATTATCAGCCTGCCGAAGAAACCCTTC
AAGAGTTCCTAGCTTTCCCATTGCCATGGCCATTTGACCCATGTAGTTTG
CAACATTCCCAGATGTTCCCGATGGGCTGGGTGACCCATTGGCCAATGTC
TCAGCCAGAGATTGCTGCAATGCATCCATCCCTTGTGACAGAGCATCTTC
TGCCTGTTGGGATGACTGCTGCAAATTATAGATGCCTACCAACTGCTGCT
CGGTTAAAGGCTCCAACTGATTCACAAGAAGCTTAAGGAGCTCAGATGAC
CGAAACCCACCAATCCACATAAAACACCTTTCT
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