EY650228

Overview
NameEY650228
Unique NameEY650228
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.992e-35
Identity = 64/111 (57.66%), Postives = 87/111 (78.38%), Query Frame = 1
Query:   64 KLVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFSPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396
            KL   + LC++V+ P+  AITCGQV+++LAPCIP++R GG   PP CC+G+R++N  ARTTPDRQAACNCLK+   ++ G+ PN AA LP +CGV IPY+ISPST+C+ V+
Sbjct:    8 KLALVVALCMVVSVPIAQAITCGQVSSNLAPCIPYVRGGGAV-PPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANVK 117          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.213e-35
Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 1
Query:   67 LVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFSPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396
            ++CA + C++V AP T A++CGQV++SLAPCI +L  GG   PP CCSGV+SLN AA+TTPDRQAAC CLK AY +I G+    AA  P +CGV IPYKISPSTDCS+V+
Sbjct:    8 VLCAGVTCMVVGAPYTEALSCGQVSSSLAPCISYLTKGGAV-PPACCSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.736e-33
Identity = 66/111 (59.46%), Postives = 85/111 (76.58%), Query Frame = 1
Query:   64 KLVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFSPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396
            KL   + LC+ V+  V +AITCGQVT+SLAPCI ++R+GG   PP CC+G+R++NG ARTT DRQ ACNCLK   G+I G+ PN AAGLP +CGV +PYKIS ST+C+ V+
Sbjct:    8 KLALVVALCMAVS--VAHAITCGQVTSSLAPCIGYVRSGGAV-PPACCNGIRTINGLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATVK 115          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP1_TOBAC (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum GN=LTP1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.395e-32
Identity = 66/111 (59.46%), Postives = 80/111 (72.07%), Query Frame = 1
Query:   64 KLVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFSPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396
            K+ C ++LC++V AP   AITCGQVT++LAPC+ +LR  G      CC GV++L  +ARTT DRQ AC CLK A G I GI    AAGLPS CGV IPYKISPSTDCS+V+
Sbjct:    6 KIACFVVLCMVVAAPCAEAITCGQVTSNLAPCLAYLRNTGPLGR--CCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ 114          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.202e-31
Identity = 58/111 (52.25%), Postives = 83/111 (74.77%), Query Frame = 1
Query:   64 KLVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFSPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396
            KL   + LC++V+ P+  A+TCGQV+++LAPCI ++R GG   PP CC+G+R++N  A+TT DRQ ACNCLK+   ++ G+  N AA LP +CGV +PYKISPST+C+ V+
Sbjct:    8 KLALVVALCMVVSVPIAQALTCGQVSSNLAPCIAYVRGGGAV-PPACCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCATVK 117          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.677e-31
Identity = 66/114 (57.89%), Postives = 85/114 (74.56%), Query Frame = 1
Query:   61 VKLVCALLLCILVTAPVTN-AITCGQVTASLAPCIPFLRTGGRFSPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396
            +KL C ++LC++V AP+   A+T GQVT SLAPCI +LR  G  + PP CC+G++SLN AA+TTP RQAAC C+K A   I GI   +A+GLP +CGV IPYKISPSTDC+ V+
Sbjct:    7 LKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.677e-31
Identity = 66/114 (57.89%), Postives = 85/114 (74.56%), Query Frame = 1
Query:   61 VKLVCALLLCILVTAPVTN-AITCGQVTASLAPCIPFLRTGGRFSPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396
            +KL C ++LC++V AP+   A+T GQVT SLAPCI +LR  G  + PP CC+G++SLN AA+TTP RQAAC C+K A   I GI   +A+GLP +CGV IPYKISPSTDC+ V+
Sbjct:    3 LKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.497e-31
Identity = 65/111 (58.56%), Postives = 81/111 (72.97%), Query Frame = 1
Query:   64 KLVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFSPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396
            K+ C +LLC++V AP   A+TCGQVTA LAPC+P+L+  GR     CC GV++L G+A+TT DR+ AC CLK A   I+GI  N AAG+PS C V IPYKISPSTDCS V+
Sbjct:    6 KIACFVLLCMVVVAPHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.567e-31
Identity = 65/111 (58.56%), Postives = 80/111 (72.07%), Query Frame = 1
Query:   64 KLVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFSPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396
            K+ C +LLC++V AP   A+TCGQVTA LAPC+P+L+  GR     CC GV+ L G+A+TT DR+ AC CLK A   I+GI  N AAG+PS C V IPYKISPSTDCS V+
Sbjct:    6 KIACFVLLCMVVVAPHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.567e-31
Identity = 62/92 (67.39%), Postives = 75/92 (81.52%), Query Frame = 1
Query:  121 ITCGQVTASLAPCIPFLRTGGRFSPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396
            ITCGQV++SLAPCI +LR GG   P  CC+GVRSLN AA+TT DRQAACNCLK A+ +I+G+  N+AAGLP +CGV +PYKISPSTDC  V+
Sbjct:    1 ITCGQVSSSLAPCINYLRAGG-VVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91          
The following BLAST results are available for this feature:
BLAST of EY650228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
NLTP1_PRUDU3.992e-3557.66Non-specific lipid-transfer protein 1 OS=Prunus du... [more]
NLTP_HELAN5.213e-3561.82Non-specific lipid-transfer protein OS=Helianthus ... [more]
NLTP_MALDO3.736e-3359.46Non-specific lipid-transfer protein OS=Malus domes... [more]
NLTP1_TOBAC5.395e-3259.46Non-specific lipid-transfer protein 1 OS=Nicotiana... [more]
NLTP_PRUAV1.202e-3152.25Non-specific lipid-transfer protein OS=Prunus aviu... [more]
NLTP2_GOSHI2.677e-3157.89Non-specific lipid-transfer protein OS=Gossypium h... [more]
NLTP1_GOSHI2.677e-3157.89Non-specific lipid-transfer protein OS=Gossypium h... [more]
NLTP1_SOLLC3.497e-3158.56Non-specific lipid-transfer protein 1 OS=Solanum l... [more]
NLTP1_SOLPN4.567e-3158.56Non-specific lipid-transfer protein 1 OS=Solanum p... [more]
LTP1_MORNI4.567e-3167.39Non-specific lipid-transfer protein 1 OS=Morus nig... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-F12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650228 ID=EY650228; Name=EY650228; organism=Citrus sinensis; type=EST; length=627bp
ATCAGGGCGGCACCCACGCGTGCCGAGCATAAATCGGCCTGAAGAATTCT
CATGGATGGCGTTAAGCTTGTTTGTGCTTTGCTTTTGTGCATTCTGGTGA
CTGCCCCGGTGACTAATGCCATAACATGCGGGCAGGTGACAGCCTCCTTG
GCTCCATGCATCCCTTTCTTGAGAACTGGAGGGCGTTTTTCTCCACCGCC
ATGCTGTAGCGGCGTCAGGTCTCTCAACGGCGCCGCCAGAACCACCCCTG
ACCGCCAAGCTGCATGCAACTGCTTGAAACGAGCTTACGGAACAATCCGC
GGCATCAAACCTAATGTTGCCGCTGGCCTTCCTAGTCAATGTGGAGTCAG
AATTCCTTACAAGATCAGCCCCAGCACCGACTGCTCTAGGGTCAGGTGAA
GTTGAGTTTGAGCTCTGTGACTTTCCAAGTATGATTGACTGAGAAGAATA
AATAAATAAAGAATATCTATGTTAATCTCTTTGTCCGAACGAGTCTCCAC
TTGTATGAGTTTCACTCTCATGTCATGTTTGTATATTTGCTTCTTATGTC
ATATTAAATATGTAAACCCGATCTGTGCTTTGAGTGATTAATTATAGCTA
TTTTGTGGTACTAAAAAAAAAAAAAAA
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