EY720240

Overview
NameEY720240
Unique NameEY720240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720240 vs. ExPASy Swiss-Prot
Match: MBF1B_ARATH (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana GN=MBF1B PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.103e-54
Identity = 106/130 (81.54%), Postives = 119/130 (91.54%), Query Frame = 3
Query:   63 MAGIGPITQDWEPVVINKKAPNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTTKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESRPAIPSQLILTRL 452
            MAGIGPITQDWEPVVI K+APNAA K+DEK VNAARR+GADIETVRK +AG+NKAASS TSLNT KLD+DTENL+HDRVP+ELKKAI+QAR +KKLTQSQLA LINEKPQVIQEYES  AIP+Q IL++L
Sbjct:    1 MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQQILSKL 130          
BLAST of EY720240 vs. ExPASy Swiss-Prot
Match: MBF1A_ARATH (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana GN=MBF1A PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.368e-53
Identity = 105/130 (80.77%), Postives = 116/130 (89.23%), Query Frame = 3
Query:   63 MAGIGPITQDWEPVVINKKAPNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTTKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESRPAIPSQLILTRL 452
            MAGIGPITQDWEPVVI KK  NAA K+DEK VNAARR+GADIETVRK +AGTNKAASS TSLNT  LD+DTENL H+RVP+ELKKAI+QAR DKKLTQSQLAQ+INEKPQVIQEYES  AIP+Q IL++L
Sbjct:    1 MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQILSKL 130          
BLAST of EY720240 vs. ExPASy Swiss-Prot
Match: MBF1C_ARATH (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana GN=MBF1C PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.447e-26
Identity = 59/128 (46.09%), Postives = 89/128 (69.53%), Query Frame = 3
Query:   75 GPITQDWEPVVINKKAPNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTS--LNTTKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESRPAIPSQLILTRL 452
            G +TQDWEPVV++K    +   +D K VNAA R G  ++TV+K  AG+NK   S+    +NT KL+E+TE  A DRV +E++  I +AR +KK++Q+ LA+ INE+ QV+QEYE+  A+P+Q +L ++
Sbjct:    7 GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVPNQAVLAKM 134          
BLAST of EY720240 vs. ExPASy Swiss-Prot
Match: EDF1_HUMAN (Endothelial differentiation-related factor 1 OS=Homo sapiens GN=EDF1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.567e-23
Identity = 61/122 (50.00%), Postives = 77/122 (63.11%), Query Frame = 3
Query:   90 DWEPV-VINKKAPNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTTKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESRPAIPSQLILTRL 452
            DW+ V V+ KK P AA  K ++ + AA+R G D+ET +K  AG NK    S + NT KLD +TE L HDRV  E+ K I Q R  K LTQ  LA  INEKPQVI +YES  AIP+  +L ++
Sbjct:    5 DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNK--QHSITKNTAKLDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKI 124          
BLAST of EY720240 vs. ExPASy Swiss-Prot
Match: EDF1_CHICK (Endothelial differentiation-related factor 1 homolog OS=Gallus gallus GN=EDF1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.567e-23
Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 3
Query:   90 DWEPV-VINKKAPNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTTKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESRPAIPSQLILTRL 452
            DW+ V V+ KK P+AA  K ++ V AA+R G D+ET +K  AG NK      + NT KLD +TE L HDRVP E+ K I Q R  K +TQ  LA  INEKPQVI +YES  AIP+  ++ ++
Sbjct:    5 DWDTVTVLRKKGPSAAQAKSKQAVLAAQRRGEDVETSKKWAAGQNK--QHFITKNTAKLDRETEELHHDRVPLEVGKVIQQGRQSKGMTQKDLATKINEKPQVIADYESGRAIPNNQVMGKI 124          
BLAST of EY720240 vs. ExPASy Swiss-Prot
Match: EDF1_BOVIN (Endothelial differentiation-related factor 1 OS=Bos taurus GN=EDF1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.567e-23
Identity = 61/122 (50.00%), Postives = 77/122 (63.11%), Query Frame = 3
Query:   90 DWEPV-VINKKAPNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTTKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESRPAIPSQLILTRL 452
            DW+ V V+ KK P AA  K ++ + AA+R G D+ET +K  AG NK    S + NT KLD +TE L HDRV  E+ K I Q R  K LTQ  LA  INEKPQVI +YES  AIP+  +L ++
Sbjct:    5 DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNK--QHSITKNTAKLDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKI 124          
BLAST of EY720240 vs. ExPASy Swiss-Prot
Match: EDF1_XENLA (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis GN=edf1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.038e-22
Identity = 57/122 (46.72%), Postives = 77/122 (63.11%), Query Frame = 3
Query:   90 DWEPV-VINKKAPNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTTKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESRPAIPSQLILTRL 452
            DW+ V V+ KK P AA  K ++ + AA+R G ++ET +K  AG NK    + + NT KLD +TE L HDRVP E+ K I Q R  K +TQ  LA  INEKPQVI +YE   AIP+  ++ ++
Sbjct:    5 DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNK--QHTITRNTAKLDRETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMGKI 124          
BLAST of EY720240 vs. ExPASy Swiss-Prot
Match: EDF1_RAT (Endothelial differentiation-related factor 1 OS=Rattus norvegicus GN=Edf1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.038e-22
Identity = 60/122 (49.18%), Postives = 77/122 (63.11%), Query Frame = 3
Query:   90 DWEPV-VINKKAPNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTTKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESRPAIPSQLILTRL 452
            DW+ V V+ KK P AA  K ++ + AA+R G D+ET +K  AG NK    S + NT KLD +TE L HDRV  E+ K I + R  K LTQ  LA  INEKPQVI +YES  AIP+  +L ++
Sbjct:    5 DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNK--QHSITKNTAKLDRETEELHHDRVTLEVGKVIQRGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKI 124          
BLAST of EY720240 vs. ExPASy Swiss-Prot
Match: EDF1_MOUSE (Endothelial differentiation-related factor 1 OS=Mus musculus GN=Edf1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.038e-22
Identity = 60/122 (49.18%), Postives = 77/122 (63.11%), Query Frame = 3
Query:   90 DWEPV-VINKKAPNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTTKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESRPAIPSQLILTRL 452
            DW+ V V+ KK P AA  K ++ + AA+R G D+ET +K  AG NK    S + NT KLD +TE L HDRV  E+ K I + R  K LTQ  LA  INEKPQVI +YES  AIP+  +L ++
Sbjct:    5 DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNK--QHSITKNTAKLDRETEELHHDRVTLEVGKVIQRGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKI 124          
BLAST of EY720240 vs. ExPASy Swiss-Prot
Match: EDF1_DANRE (Endothelial differentiation-related factor 1 homolog OS=Danio rerio GN=edf1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.785e-22
Identity = 55/121 (45.45%), Postives = 75/121 (61.98%), Query Frame = 3
Query:   90 DWEPVVINKKAPNAATKKDEKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTTKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESRPAIPSQLILTRL 452
            DW+ V + +K  +AA  K ++ V AA+R G  +ET +K  AG NK      + NT KLD +TE L+H RVP E+ K I Q R +K LTQ  LA  INEKPQ+I EYE   AIP+  ++ ++
Sbjct:    5 DWDTVTVLRKKGSAAQSKSKQAVTAAQRKGEAVETSKKWAAGQNK--QHVVTKNTAKLDRETEELSHQRVPLEVGKVIQQGRQNKGLTQKDLATKINEKPQIIAEYECGKAIPNNQVMGKI 123          
The following BLAST results are available for this feature:
BLAST of EY720240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
MBF1B_ARATH5.103e-5481.54Multiprotein-bridging factor 1b OS=Arabidopsis tha... [more]
MBF1A_ARATH7.368e-5380.77Multiprotein-bridging factor 1a OS=Arabidopsis tha... [more]
MBF1C_ARATH3.447e-2646.09Multiprotein-bridging factor 1c OS=Arabidopsis tha... [more]
EDF1_HUMAN3.567e-2350.00Endothelial differentiation-related factor 1 OS=Ho... [more]
EDF1_CHICK3.567e-2349.18Endothelial differentiation-related factor 1 homol... [more]
EDF1_BOVIN3.567e-2350.00Endothelial differentiation-related factor 1 OS=Bo... [more]
EDF1_XENLA1.038e-2246.72Endothelial differentiation-related factor 1 homol... [more]
EDF1_RAT1.038e-2249.18Endothelial differentiation-related factor 1 OS=Ra... [more]
EDF1_MOUSE1.038e-2249.18Endothelial differentiation-related factor 1 OS=Mu... [more]
EDF1_DANRE8.785e-2245.45Endothelial differentiation-related factor 1 homol... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-003-H09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720240 ID=EY720240; Name=EY720240; organism=Citrus sinensis; type=EST; length=734bp
CACGCCGTCGCAAAACCCAAAGAAAACTTTTAAGTGAAGAGATATTTGAT
CGAGGAGTGGACATGGCCGGAATCGGACCGATCACACAGGACTGGGAGCC
GGTGGTGATTAACAAGAAAGCCCCTAACGCCGCCACCAAGAAGGACGAGA
AGGTCGTTAACGCTGCCCGCCGCGCCGGTGCCGATATCGAGACTGTCAGA
AAATCACATGCTGGCACAAACAAGGCTGCCTCGAGTAGCACTTCTCTGAA
CACCACGAAGCTTGATGAAGATACAGAGAACCTTGCTCATGATCGAGTGC
CTAGTGAACTCAAGAAAGCCATTGTTCAGGCACGAAATGATAAGAAACTT
ACCCAGTCTCAACTTGCTCAGTTGATCAATGAGAAGCCCCAGGTGATTCA
GGAATATGAATCCCGACCAGCCATTCCAAGTCAGCTGATACTTACCAGGC
TGGGAGAGGGCCCCTGGCTGTGAACCGCCCACCGAACGACCTGAGGAGGA
GGGATGAATAAAAACTGCTAACCAGCACTGGCCGCACTGTCCCGGTGGTT
GAGGCTTCACAATGGGGTGCTGGGGGTAGAGTGTGGCTCCCTCGGGGTGT
GGGTCCAGACCATACCTGGCGTCCTTGACGGGTCAGTCCGGTGCGGGAGG
GGGAACTCGATGTAATCCGTGAAGCTCTTGCTGGCCACGAAAAAACACAG
ACTAAAGAAGGGGGGGGGCGGCCGAAAGGGATCC
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