EY664333

Overview
NameEY664333
Unique NameEY664333
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY664333 vs. ExPASy Swiss-Prot
Match: TSJT1_TOBAC (Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.860e-28
Identity = 64/149 (42.95%), Postives = 92/149 (61.74%), Query Frame = 3 
Query:  120 MLGVFISAIVSPPEDLVA--AGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHHNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGLAKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVA 560
            ML VF  +I  PP +L    AG +    KT    + + F      +    + +   +A++H NE+PL+ RS  V D++FC+F GALDN   LR+ YGL++ A E ++++EAYK LRDRAPYPP+ V+  L G FAFI++D   STLF+A
Sbjct:    1 MLAVFEQSIGRPPPELSLPQAGIQKKEAKTREE-IAESFKTWKQDSTFYHLFNGNFMAFSHGNENPLQPRSIVVMDDVFCIFSGALDNTFDLRKHYGLSRQATEAMIMVEAYKVLRDRAPYPPDQVIKELEGKFAFILFDSKASTLFLA 148
The following BLAST results are available for this feature:
BLAST of EY664333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TSJT1_TOBAC6.860e-2842.95Stem-specific protein TSJT1 OS=Nicotiana tabacum G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-065-E01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664333 ID=EY664333; Name=EY664333; organism=Citrus sinensis; type=EST; length=913bp
CCACGCGTCCGACTTTCCAGTTAAAGCCAAAGTAGTTCCGAACGGATCAA
AGTTTTCTTGTAGGAGAGATAAATTTCTAGGGCGAGAAAGCGAGAGAAAA
GGAAATTTGGTAGCTTAAAATGTTGGGAGTGTTCATCAGCGCGATCGTTT
CACCTCCAGAGGATCTGGTGGCGGCCGGAAGCCGGACTCCGTCGCCGAAG
ACCACATCGACGGCACTGGTCGACCGTTTCCTCCAGACCAACTCGTCTGC
TGTGTCCGTACAGGTCGGGGACAACGTCACCCTCGCGTACACTCATCATA
ACGAGTCTCCTTTACGGCAAAGATCATTTGCTGTGAAAGATGAGATCTTT
TGCTTGTTTGAGGGAGCACTTGATAACTTGGGAAGCCTGAGGCAGCAATA
TGGACTAGCTAAGTCGGCAAATGAAGTGATCTTGGTGATTGAGGCATACA
AGGCTCTGCGTGATCGGGCCCCTTACCCACCGAACCATGTCGTTGGCCAC
CTTAGTGGGTACTTTGCCTTCATTGTCTACGACAAGTCCACCTCCACCTT
GTTTGTGGCTTCTGACCAATTTGGTAGGGCTCCTCTTTATTGGGGAATCA
CTGCTGATGGACATGTNGCCTTTGCTGATGATGCTGACTTGCTCAAAGGG
GCGTGCGGCAAGTCACTTGCTCCTTTCCCTAAGGGTTGNTTCTTCTAACA
GCAGGTGGAGGACTGAGATACTTTGGAATCCAAAGACCAGATCCCTGCGG
TCCTGCGGCGGAGAATAAATCTGGGGGGCTACTTTAGGGGGGAAGGCCAC
CTTTTTTGCCCCCCAAGTAAAGGGTAAAAATCTTCTTTCCCCTTGAATTT
AACCCACGGTAAAAACCGGGGGTGGGGGGAAAAATTTGGGGGGATCCCCT
CAAAGGGGCCTGG
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