EY664329

Overview
NameEY664329
Unique NameEY664329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664329 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.079e-43
Identity = 83/115 (72.17%), Postives = 98/115 (85.22%), Query Frame = 1
Query:   40 DELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSYEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 384
            +EL+ NPDK FLKTITAQLQT+LG+SL+EILSRH+TDE+YLGQR++PEWT  + PL AFD FGKKL ++E++II RN +  L NR GPV  PYTLL PTSEGGLTGKGIPNSVSI
Sbjct:  747 EELKRNPDKAFLKTITAQLQTLLGVSLVEILSRHTTDEIYLGQRESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEGGLTGKGIPNSVSI 861          
BLAST of EY664329 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.630e-43
Identity = 82/115 (71.30%), Postives = 97/115 (84.35%), Query Frame = 1
Query:   40 DELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSYEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 384
            +EL+ NPDK FLKTITAQLQT+LG+SLIEILSRH+TDE+YLGQR++PEWT  + PL AF+ FG KL ++E++I+ RN N  L NR GPV  PYTLL PTSEGGLTGKGIPNSVSI
Sbjct:  746 EELKKNPDKAFLKTITAQLQTLLGVSLIEILSRHTTDEIYLGQRESPEWTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEGGLTGKGIPNSVSI 860          
BLAST of EY664329 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.318e-41
Identity = 81/115 (70.43%), Postives = 99/115 (86.09%), Query Frame = 1
Query:   40 DELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSYEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 384
            +ELE NPDKVFLKTITAQLQT+LGISLIEILS HS+DEVYLGQRD+ EW + +  L+AF++FG+K+ E+E+ I  RN ++ LKNR G VKMPYTLL P+SEGG+TG+GIPNSVSI
Sbjct:  745 EELEKNPDKVFLKTITAQLQTLLGISLIEILSTHSSDEVYLGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRGIPNSVSI 859          
BLAST of EY664329 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 5.858e-38
Identity = 78/119 (65.55%), Postives = 92/119 (77.31%), Query Frame = 1
Query:   43 ELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSYEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVP-----TSEGGLTGKGIPNSVSI 384
            ELE + D  FLKTIT QLQT+LGIS+IEILS HSTDE+YLGQRD+P WT+ + PL+AF  FGK+L  +E  II RN++K  KNR GPV +PYTLL P     T EGG+TGKGIPNSVSI
Sbjct:  768 ELEEDADVAFLKTITPQLQTLLGISIIEILSMHSTDEIYLGQRDSPNWTADDEPLEAFKRFGKELELIENNIIRRNNDKRFKNRTGPVNIPYTLLYPNTTDYTREGGITGKGIPNSVSI 886          
BLAST of EY664329 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.458e-37
Identity = 73/115 (63.48%), Postives = 93/115 (80.87%), Query Frame = 1
Query:   40 DELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSYEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 384
            +EL++NPDKVFLKT   QLQ++L IS+ E+ SRH++DEVYLGQRD+ EWT  + PL AF+ FGK L+++E +I+  N +K+ KNR GPV +PYTLL PTSE GLTGKGIPNSVSI
Sbjct:  745 EELKTNPDKVFLKTFVPQLQSLLEISIFEVSSRHASDEVYLGQRDSIEWTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFPTSEEGLTGKGIPNSVSI 859          
BLAST of EY664329 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.221e-35
Identity = 68/115 (59.13%), Postives = 92/115 (80.00%), Query Frame = 1
Query:   40 DELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSYEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 384
            +EL  NP K +LKTIT + QT++ +S+IEILSRH++DEVYLG+RD P WTS    L+AF  FG KLA++E K+  RN+++ L+NR GPV+MPYTLL+P+S+ GLT +GIPNS+SI
Sbjct:  743 EELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI 857          
BLAST of EY664329 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.062e-35
Identity = 67/115 (58.26%), Postives = 94/115 (81.74%), Query Frame = 1
Query:   40 DELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSYEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 384
            +EL  +P K +LKTIT + QT++ +S+IEILSRH++DE+YLG+RD P WTS +  L+AF +FG KLAE+E+K+  RN+++ L+NR GPV+MPYTLL P+S+ GLT +GIPNS+SI
Sbjct:  747 EELVKSPQKAYLKTITPKFQTLIDLSVIEILSRHASDELYLGERDNPNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSKEGLTFRGIPNSISI 861          
BLAST of EY664329 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.303e-34
Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 1
Query:   43 ELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSYEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTSEG------GLTGKGIPNSVSI 384
            EL+ NP+K F++TIT+Q QTILG+SLIEILS+HS DE+YLGQRDTPEWTS    L+AF  F ++L E+E K+++ N +  LKNRVGP   PYTL+ P +        G+T +GIPNS+SI
Sbjct:  744 ELDENPEKFFIRTITSQFQTILGVSLIEILSKHSADEIYLGQRDTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863          
BLAST of EY664329 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.131e-34
Identity = 69/116 (59.48%), Postives = 91/116 (78.45%), Query Frame = 1
Query:   40 DELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPE-WTSYEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 384
            D L  NP+K FLKTIT + +T++ +++IEILSRH++DE YLGQRD  + WTS   PL+AF  FGKKL E+E+K+I +N ++ L+NR GP KMPYTLL P+SE GLT +GIPNS+SI
Sbjct:  738 DALAKNPEKEFLKTITGKKETLIDLTVIEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI 853          
BLAST of EY664329 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 8.753e-34
Identity = 68/121 (56.20%), Postives = 90/121 (74.38%), Query Frame = 1
Query:   40 DELESNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQRDTPEWTSYEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTSE------GGLTGKGIPNSVSI 384
            DEL  +P+KVF++TIT Q+Q I+GISL+EILS+HS+DEVYLGQRDTPEWTS    L+AF  FG +L E+E ++++ N + + KNRVGP   PYTLL P +        GL+ +GIPNS+SI
Sbjct:  750 DELARDPEKVFVRTITKQMQAIVGISLLEILSKHSSDEVYLGQRDTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870          
The following BLAST results are available for this feature:
BLAST of EY664329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOX1_SOLTU2.079e-4372.17Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2... [more]
LOXA_SOLLC4.630e-4371.30Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 P... [more]
LOX1_ARATH3.318e-4170.43Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=... [more]
LOX5_ARATH5.858e-3865.55Lipoxygenase 5, chloroplastic OS=Arabidopsis thali... [more]
LOXB_SOLLC8.458e-3763.48Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 P... [more]
LOX3_SOYBN1.221e-3559.13Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 ... [more]
LOX3_PEA6.062e-3558.26Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=... [more]
LOX1_ORYSJ2.303e-3456.67Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=... [more]
LOX4_SOYBN5.131e-3459.48Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1[more]
LOX2_ORYSJ8.753e-3456.20Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-065-D09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664329 ID=EY664329; Name=EY664329; organism=Citrus sinensis; type=EST; length=591bp
CCGGNATTCCAGGCCCGACCCCGCGTCCGCTCCATAATTGATGAGCTTGA
GTCCAATCCTGACAAAGTTTTCTTAAAAACAATCACTGCTCAGCTGCAAA
CCATTCTAGGCATTTCCCTTATAGAAATCTTGTCAAGGCATTCAACTGAT
GAAGTTTATCTCGGACAAAGAGACACCCCAGAATGGACATCATATGAAGC
ACCATTGCAAGCATTTGATGAATTTGGAAAGAAACTGGCAGAAGTTGAGG
AAAAAATTATCAGCAGAAACCATAATAAGAATTTAAAGAATCGGGTTGGC
CCGGTGAAAATGCCATATACTTTGCTCGTTCCTACTAGTGAAGGCGGGCT
TACAGGAAAAGGAATCCCCAACAGTGTTTCAATATAGAGCTTCTGTACTT
GGATTGTTGTAGTATATGTAAGTTTTGTATCAATGTGGCATTGCAAAATA
ATTTAAATTTAGTCTATGTTCATTTCATCAACTTTAGTCGTAGATAGGAG
AATAAGACTTTGGCCAATAGTAATATTTATATCTAATCAAATTAGGTTAA
CAAAAATAACAAATAAAAATTTATAAAAAAAAAAAAAAAAA
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