EY664313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664313 vs. ExPASy Swiss-Prot
Match: PSB28_ORYSJ (Photosystem II reaction center PSB28 protein, chloroplastic OS=Oryza sativa subsp. japonica GN=PSB28 PE=2 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 4.203e-49 Identity = 100/168 (59.52%), Postives = 124/168 (73.81%), Query Frame = 3 Query: 159 PISHCWHPQSRSPSLSGIVTWAVHGSAQSPFNGQSVHMPRMRLSLVTRNSKVSGPITMAVKPTIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRFMERDANQNGLQ 662 PIS P+ SG + ++H S F G S+ R + + + R+ + MA +P IQFIQGTDE T+PDV+LTKSRDG+NG+AIF+F +PSVFDSS E+GDITGFYMID+EG LQSVDVSAKFVNG+P+ IEAKY+MR+PREWDRFMRFMER + NGLQ Sbjct: 13 PISARAQPRRCPAGSSGGPSQSLHSS----FGGVSLQCRRTKPASLHRSRPSMQVVMMAARPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITGFYMIDDEGVLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFMERYSQANGLQ 176
BLAST of EY664313 vs. ExPASy Swiss-Prot
Match: PSB28_ARATH (Photosystem II reaction center PSB28 protein, chloroplastic OS=Arabidopsis thaliana GN=PSB28 PE=1 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 5.490e-49 Identity = 103/165 (62.42%), Postives = 124/165 (75.15%), Query Frame = 3 Query: 177 HPQSRSPSLSGIV--TWAVHGSAQSPFNGQSVHMPRMRLSLVTRNSKVSG-PITMAVKPTIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRFMERDANQNGLQ 662 H Q P SGIV + +V S F G V +PR + S T + ITM VKP +QFIQGTDE+T+PDVKLT+SRDGSNGMA+FSF +PSVFDSSGE+G+ITG YMIDEEG +QS DV+A+FVNG+P I AK+IMRSP+EWDRFMRFMER ++QNGLQ Sbjct: 15 HSQRNVPR-SGIVLSSCSVLPIKSSSFTGSPVSLPRAQPSSRTALRPMKPVSITMMVKPALQFIQGTDEMTIPDVKLTRSRDGSNGMALFSFDQPSVFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHIMRSPKEWDRFMRFMERYSDQNGLQ 178
BLAST of EY664313 vs. ExPASy Swiss-Prot
Match: PSB28_OSTTA (Photosystem II reaction center psb28 protein, chloroplastic OS=Ostreococcus tauri GN=psb28 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30 Identity = 61/121 (50.41%), Postives = 91/121 (75.21%), Query Frame = 3 Query: 297 TRNSKVSGPITMAVKPTIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRFMERDANQNGL 659 +++++ S + +IQF++G +E VP+V+LT+S+DGSNG A F FS+P VF++ GDITG ++ DEEG + +VDV+AKFVNG+P+ IEA+Y+M++ +W+RFMRFMER A NGL Sbjct: 24 SKSARRSVVVRAGTTTSIQFVKGQNETAVPEVRLTRSKDGSNGTAFFIFSDPDVFENGQ--GDITGMFLTDEEGEMSTVDVNAKFVNGKPTGIEARYVMKTEADWNRFMRFMERYAEDNGL 142
BLAST of EY664313 vs. ExPASy Swiss-Prot
Match: PSB28_ODOSI (Photosystem II reaction center psb28 protein OS=Odontella sinensis GN=psb28 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30 Identity = 62/105 (59.05%), Postives = 81/105 (77.14%), Query Frame = 3 Query: 348 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFD-SSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRFMERDANQNGL 659 IQFI+G DE +PDV+LT+SRDGS G A F F P++ D S+ + G+ITG Y+ID+EGTL++ DV+A+F+NG+P IE+ YIM+SP WDRFMRFMER NGL Sbjct: 5 IQFIKGLDEKVLPDVRLTRSRDGSTGTATFRFKNPNILDKSTAKEGEITGMYLIDQEGTLETRDVNAQFINGKPEAIESIYIMKSPEAWDRFMRFMERYGESNGL 109
BLAST of EY664313 vs. ExPASy Swiss-Prot
Match: PSB28_PHATR (Photosystem II reaction center psb28 protein OS=Phaeodactylum tricornutum GN=psb28 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.169e-29 Identity = 61/105 (58.10%), Postives = 80/105 (76.19%), Query Frame = 3 Query: 348 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFD-SSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRFMERDANQNGL 659 IQFI+G DE +PDV+LT+S+DGS G A F F P++ D ++ + G+ITG Y+IDEEG L++ DV+A+FVNG+P IE+ YIM+SP WDRFMRFMER NGL Sbjct: 5 IQFIKGLDEKVLPDVRLTRSKDGSTGTATFRFKNPNILDKTTAKEGEITGMYLIDEEGILETRDVNARFVNGKPEAIESIYIMKSPEAWDRFMRFMERYGETNGL 109
BLAST of EY664313 vs. ExPASy Swiss-Prot
Match: PSB28_PORYE (Photosystem II reaction center psb28 protein OS=Porphyra yezoensis GN=psb28 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.833e-29 Identity = 61/106 (57.55%), Postives = 81/106 (76.42%), Query Frame = 3 Query: 345 TIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSS-GEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRFMERDANQNGL 659 TIQFIQG +E VPDV+LT+SRDGS G A F F+ P + D+S + G+ITG Y++D EG + + DV+AKF+NG+P IEA ++++SP +WDRFMRFMER A NGL Sbjct: 3 TIQFIQGINEEVVPDVRLTRSRDGSTGTATFRFTNPKILDASMADKGEITGMYLMDTEGQIITRDVNAKFINGKPQAIEAVHVIKSPDDWDRFMRFMERYAQDNGL 108
BLAST of EY664313 vs. ExPASy Swiss-Prot
Match: PSB28_PORPU (Photosystem II reaction center psb28 protein OS=Porphyra purpurea GN=psb28 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.833e-29 Identity = 61/106 (57.55%), Postives = 81/106 (76.42%), Query Frame = 3 Query: 345 TIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSS-GEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRFMERDANQNGL 659 TIQFIQG +E VPDV+LT+SRDGS G A F F+ P + D+S + G+ITG Y++D EG + + DV+AKF+NG+P IEA ++++SP +WDRFMRFMER A NGL Sbjct: 3 TIQFIQGINEEVVPDVRLTRSRDGSTGTATFRFTNPKILDASMADKGEITGMYLMDTEGQIITRDVNAKFINGKPQAIEAVHVIKSPDDWDRFMRFMERYAQDNGL 108
BLAST of EY664313 vs. ExPASy Swiss-Prot
Match: PSB28_GUITH (Photosystem II reaction center psb28 protein OS=Guillardia theta GN=psb28 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.699e-29 Identity = 62/105 (59.05%), Postives = 79/105 (75.24%), Query Frame = 3 Query: 348 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEI-GDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRFMERDANQNGL 659 IQFIQG +E +PDV+LT+SRDGS G A F F+ P V ++ + G+ITG Y+IDEEG L + DV+A+FVNG+P IEA YIM+S +WDRFMRFMER + NGL Sbjct: 4 IQFIQGVNEDVIPDVRLTRSRDGSTGTATFRFANPKVLEAQSSVKGNITGMYLIDEEGQLVTRDVNARFVNGKPQGIEAVYIMQSKEDWDRFMRFMERYSEDNGL 108
BLAST of EY664313 vs. ExPASy Swiss-Prot
Match: PSB28_THAPS (Photosystem II reaction center psb28 protein OS=Thalassiosira pseudonana GN=psb28 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.076e-28 Identity = 62/105 (59.05%), Postives = 78/105 (74.29%), Query Frame = 3 Query: 348 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEI-GDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRFMERDANQNGL 659 IQFI+G DE +PDV+LT+SRDGS G A F F ++ + S + G+ITG YMIDEEG L++ DVSA+FVNG+P +E+ YIM+SP WDRFMRFMER NGL Sbjct: 5 IQFIKGIDEKVLPDVRLTRSRDGSTGTATFLFKNANLINKSLALNGEITGMYMIDEEGILETRDVSARFVNGKPQAVESIYIMKSPEAWDRFMRFMERYGESNGL 109
BLAST of EY664313 vs. ExPASy Swiss-Prot
Match: PSB28_GRATL (Photosystem II reaction center psb28 protein OS=Gracilaria tenuistipitata var. liui GN=psb28 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.836e-28 Identity = 62/105 (59.05%), Postives = 78/105 (74.29%), Query Frame = 3 Query: 348 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEI-GDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRFMERDANQNGL 659 IQFI+G +E V DV LT+SRDGS G A F F+ P + S E GDITG Y+ D+EG L + DVSAKF+NG+P +EA YI++SP+EWDRFMRFME+ AN+N L Sbjct: 4 IQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILKSGMEDKGDITGMYLKDDEGELMTRDVSAKFINGKPQAVEAIYIIKSPQEWDRFMRFMEKYANENKL 108 The following BLAST results are available for this feature:
BLAST of EY664313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664313 ID=EY664313; Name=EY664313; organism=Citrus sinensis; type=EST; length=927bpback to top |