CX306607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL211_ARATH (60S ribosomal protein L21-1 OS=Arabidopsis thaliana GN=RPL21A PE=2 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 5.987e-42 Identity = 78/142 (54.93%), Postives = 103/142 (72.54%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVENEKHKALVRAGKATKKVLKRDPGTPNPAKFVTGSESQNIAP 738 TRDLF +PFRK+G + LSTYL +K+GDYVD+K N +IHKGMPHKFYHG+TGR+WNVT RA+GV++NK +GNRI++KRI+VRVEH+Q+S+C F R +N++ KA +A T KR P P P V G + + P Sbjct: 11 TRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETIST-KRQPKGPKPGFMVEGMTLETVTP 151
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL212_ARATH (60S ribosomal protein L21-2 OS=Arabidopsis thaliana GN=RPL21E PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.880e-41 Identity = 78/142 (54.93%), Postives = 102/142 (71.83%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVENEKHKALVRAGKATKKVLKRDPGTPNPAKFVTGSESQNIAP 738 TRDLF +PFRK+G + LSTYL +K+GDYVD+K N +IHKGMPHKFYHG+TGR+WNVT RA+GV++NK +GNRI++KRI+VRVEH+Q+S+C F R +N+ KA +A T KR P P P V G + + P Sbjct: 11 TRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETIST-KRQPKGPKPGFMVEGMTLETVTP 151
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21A_YEAST (60S ribosomal protein L21-A OS=Saccharomyces cerevisiae GN=RPL21A PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.687e-36 Identity = 80/144 (55.56%), Postives = 101/144 (70.14%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVENEKHKALVRAGKATKKVLKRDPGTPNPAKFVT--GSESQNIAP 738 TR +FQ+ FRK G V LSTYL+ YK+GD VDIKAN SI KGMPHKFY GKTG V+NVT ++GV INK VGNR ++KR+N+RVEHI+ SKCR FLER+ N +A +A + LKR P P ++ V+ G+ Q +AP Sbjct: 11 TRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKA-QGVAVQLKRQPAQPRESRIVSTEGNVPQTLAP 153
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21B_YEAST (60S ribosomal protein L21-B OS=Saccharomyces cerevisiae GN=RPL21B PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.878e-36 Identity = 79/144 (54.86%), Postives = 101/144 (70.14%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVENEKHKALVRAGKATKKVLKRDPGTPNPAKFVT--GSESQNIAP 738 TR +FQ+ FRK G V +STYL+ YK+GD VDIKAN SI KGMPHKFY GKTG V+NVT ++GV INK VGNR ++KR+N+RVEHI+ SKCR FLER+ N +A +A + LKR P P ++ V+ G+ Q +AP Sbjct: 11 TRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKA-QGVAVQLKRQPAQPRESRIVSTEGNVPQTLAP 153
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21_CYAPA (60S ribosomal protein L21 OS=Cyanophora paradoxa GN=RPL21 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.436e-35 Identity = 71/132 (53.79%), Postives = 92/132 (69.70%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVENEKHKALVRAGKATKKVLKRDPGTPNPAKFV 708 TR LF + F+ GPV LSTYL N+KIG+YVD+ N ++HKGMP K+YHG+TG VWNVT RAIGV+INK V +RI+KKRI+VR++H++KS CR FL+R+ EN+K K K KR P P + Sbjct: 11 TRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTKRLPVLPKAGAII 142
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21B_SCHPO (60S ribosomal protein L21-B OS=Schizosaccharomyces pombe GN=rpl21b PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 4.156e-35 Identity = 73/141 (51.77%), Postives = 98/141 (69.50%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVENE-KHKALVRAGKATKKVLKRDPGTPNPAKFVTGSESQNI 732 TR FQ+ FR+ G ++LSTYL+ YK+GD VDIK N ++ KGMPHK+YHGKTG V+NVT ++GV I K VGNR M+KR+NVR+EH++ SKCR FL+R+ NE K K GK + L+R P P A FV+ ++ + Sbjct: 11 TRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQ--LRRQPAPPATAHFVSTENNEPV 149
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21A_SCHPO (60S ribosomal protein L21-A OS=Schizosaccharomyces pombe GN=rpl21a PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.156e-35 Identity = 73/141 (51.77%), Postives = 98/141 (69.50%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVENE-KHKALVRAGKATKKVLKRDPGTPNPAKFVTGSESQNI 732 TR FQ+ FR+ G ++LSTYL+ YK+GD VDIK N ++ KGMPHK+YHGKTG V+NVT ++GV I K VGNR M+KR+NVR+EH++ SKCR FL+R+ NE K K GK + L+R P P A FV+ ++ + Sbjct: 11 TRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQ--LRRQPAPPAKAHFVSTENNEPV 149
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21_DICDI (60S ribosomal protein L21 OS=Dictyostelium discoideum GN=rpl21 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.024e-33 Identity = 72/133 (54.14%), Postives = 96/133 (72.18%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVENEKHKALVRAGKATKKV-LKRDPGTPNPAKFV 708 TR LF + FR G ++ +T+L +++GDYVDIKA ++HKGMPHKFYHG+TGRVWNVTPRA+GV INK VG RI+ K+I+VR EH++ S L+R+ EN+ KA+V A KA K V ++R+P P FV Sbjct: 11 TRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGRTGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENK--KAVVEAKKAGKWVDVRRNPAAPKDGFFV 141
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21_HUMAN (60S ribosomal protein L21 OS=Homo sapiens GN=RPL21 PE=1 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 2.978e-33 Identity = 74/144 (51.39%), Postives = 95/144 (65.97%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVENEKHKALVRAGKATKKVLKRDPGTPNPAKFV--TGSESQNIAP 738 TR +F +PFRK G V L+TY+ YK GD VDIK ++ KGMPHK YHGKTGRV+NVT A+G+ +NK V +I+ KRINVR+EHI+ SK R FL+R+ EN++ K + K T LKR P P A FV G E + + P Sbjct: 11 TRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKE-KGTWVQLKRQPAPPREAHFVRTNGKEPELLEP 153
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21_CHILA (60S ribosomal protein L21 OS=Chinchilla lanigera GN=RPL21 PE=2 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 6.634e-33 Identity = 73/144 (50.69%), Postives = 95/144 (65.97%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVENEKHKALVRAGKATKKVLKRDPGTPNPAKFV--TGSESQNIAP 738 TR +F +P+RK G V L+TY+ YK GD VDIK ++ KGMPHK YHGKTGRV+NVT A+G+ +NK V +I+ KRINVR+EHI+ SK R FL+R+ EN++ K + K T LKR P P A FV G E + + P Sbjct: 11 TRYMFSRPYRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKE-KGTWVQLKRQPAPPREAHFVRTNGKEPELLEP 153 The following BLAST results are available for this feature:
BLAST of CX306607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306607 ID=CX306607; Name=CX306607; organism=Citrus sinensis; type=EST; length=742bpback to top |