CX303411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_MAGGR (40S ribosomal protein S29 OS=Magnaporthe grisea GN=RPS29 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.160e-19 Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHKYR 172 M HD +WNS P+TYGKG+R CRVC H+AGLIRKY LD+CRQCF++ + DIGF K+R Sbjct: 1 MSHDSVWNSRPRTYGKGARSCRVCTHRAGLIRKYGLDICRQCFREKAADIGFVKHR 56
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_ASHGO (40S ribosomal protein S29 OS=Ashbya gossypii GN=RPS29 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.978e-19 Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHKYR 172 M H+ +W SHP+ YGKGSRQCRVCA +GLIRKY L++CRQCF++ + DIGFHKYR Sbjct: 1 MAHENVWFSHPRNYGKGSRQCRVCASHSGLIRKYGLNICRQCFREKANDIGFHKYR 56
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_NEUCR (40S ribosomal protein S29 OS=Neurospora crassa GN=rps-29 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.517e-19 Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHKYR 172 M H+ +WNS P+TYGKGSR CRVC H AGLIRKY L++CRQCF++ + DIGF K+R Sbjct: 1 MSHESVWNSRPRTYGKGSRSCRVCTHSAGLIRKYGLNICRQCFREKANDIGFTKHR 56
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_GRIJA (40S ribosomal protein S29 OS=Griffithsia japonica GN=RPS29 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.675e-18 Identity = 35/56 (62.50%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHKYR 172 MGH +W SHP+ YGKGSR C++C +K GLIRKY +++CRQCF++Y+ DIGF KYR Sbjct: 1 MGHQNIWYSHPRKYGKGSRSCKICGNKHGLIRKYSMNICRQCFREYAKDIGFIKYR 56
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29B_YEAST (40S ribosomal protein S29-B OS=Saccharomyces cerevisiae GN=RPS29B PE=1 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 2.187e-18 Identity = 35/56 (62.50%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHKYR 172 M H+ +W SHP+ +GKGSRQCRVC+ GL+RKY L++CRQCF++ + DIGFHKYR Sbjct: 1 MAHENVWFSHPRRFGKGSRQCRVCSSHTGLVRKYDLNICRQCFREKANDIGFHKYR 56
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_CANGA (40S ribosomal protein S29 OS=Candida glabrata GN=RPS29 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.085e-17 Identity = 35/56 (62.50%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHKYR 172 M H+ +W SHP+ +GKGSRQCRVC+ GLIRKY L++CRQCF++ + DIGF+KYR Sbjct: 1 MAHENVWFSHPRRFGKGSRQCRVCSSHTGLIRKYDLNICRQCFRERASDIGFNKYR 56
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29A_YEAST (40S ribosomal protein S29-A OS=Saccharomyces cerevisiae GN=RPS29A PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 1.418e-17 Identity = 35/56 (62.50%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHKYR 172 M H+ +W SHP+ YGKGSRQCRVC+ GLIRKY L++CRQCF++ + DIGF+K+R Sbjct: 1 MAHENVWFSHPRRYGKGSRQCRVCSSHTGLIRKYGLNICRQCFREKANDIGFNKFR 56
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_DEBHA (40S ribosomal protein S29 OS=Debaryomyces hansenii GN=RPS29 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.851e-17 Identity = 34/56 (60.71%), Postives = 47/56 (83.93%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHKYR 172 M H+ +W SHP+ +GKGSRQCRVC+ +GLIRKY L++CRQCF++ + DIGF+K+R Sbjct: 1 MAHESVWFSHPRNFGKGSRQCRVCSSHSGLIRKYDLNICRQCFRERASDIGFNKFR 56
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_IXOSC (40S ribosomal protein S29 OS=Ixodes scapularis GN=RpS29 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.158e-17 Identity = 35/54 (64.81%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MGH+ +W SHP+ YG GSR CRVCA+ GLIRKY L++CR+CF+QY+ DIGF K Sbjct: 1 MGHENIWYSHPRKYGPGSRYCRVCANHHGLIRKYGLNICRRCFRQYAADIGFKK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_SCALT (40S ribosomal protein S29 OS=Scarabaeus laticollis GN=RpS29 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.387e-17 Identity = 33/54 (61.11%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MGH +W SHP+ YG+GSR CR C+++ GLIRKY L++CRQCF++Y+ DIGF K Sbjct: 1 MGHQNIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54 The following BLAST results are available for this feature:
BLAST of CX303411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX303411 ID=CX303411; Name=CX303411; organism=Citrus sinensis; type=EST; length=199bpback to top |