CX303400

Overview
NameCX303400
Unique NameCX303400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX303400 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 349.747 bits (896), Expect = 7.668e-96
Identity = 162/180 (90.00%), Postives = 171/180 (95.00%), Query Frame = 2 
Query:  125 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKNLLSLWNADDWATRGGLVKTDW 664
            FYQDFDLTWG  RAKIFNGGQLLSLSLD+VSGSGF+SK++YLFGRIDMQLKLVAG+SAGTVTAYYLSSQGPTHDEIDFEFLGN+SG PYILHTNIF QGKGNREQQFYLWFDPTRNFHTYS+IWKPQH+IFLVDN PIRVFKNAE LGVPFPKNQPM+   SLWNADDWATRGGLVKTDW
Sbjct:   32 FYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDW 211
[Close]
BLAST of CX303400 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 334.724 bits (857), Expect = 2.553e-91
Identity = 149/180 (82.78%), Postives = 171/180 (95.00%), Query Frame = 2 
Query:  125 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKNLLSLWNADDWATRGGLVKTDW 664
            F ++FDLTWG+ R KIF+GG++LSLSLDRVSGSGF+SK++YLFGRIDMQLKLVAG+SAGTVTAYYLSS+GPTHDEIDFEFLGN +G+PY+LHTN+FAQGKGNREQQFYLWFDPT+NFHTYS++W+PQH+IF+VDN+PIRVF NAE LGVPFPKNQPMK   SLWNADDWATRGGLVKTDW
Sbjct:   27 FNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPTHDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDW 206
[Close]
BLAST of CX303400 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 2.161e-90
Identity = 148/180 (82.22%), Postives = 169/180 (93.89%), Query Frame = 2 
Query:  125 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKNLLSLWNADDWATRGGLVKTDW 664
            F+ +FDLTWGD R KIFNGG +LSLSLD+VSGSGF+SK++YLFGRIDMQLKLVAG+SAGTVTAYYLSSQG THDEIDFEFLGN +G+PY+LHTN+FAQGKG+REQQFYLWFDPT+NFHTYS++W+PQH+IFLVDN+PIRVF NAE LGVPFPK+QPM+   SLWNADDWATRGGLVKTDW
Sbjct:   28 FFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGATHDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDW 207
[Close]
BLAST of CX303400 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.606e-77
Identity = 130/180 (72.22%), Postives = 156/180 (86.67%), Query Frame = 2 
Query:  125 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKNLLSLWNADDWATRGGLVKTDW 664
            FY +FD+TWG+ RA I   GQLL+ +LD++SGSGFQSK++YLFG+IDM++KLVAG+SAGTVTAYYLSS+G T DEIDFEFLGNV+GQPY+LHTN+F  GKGNRE QFYLWFDPT +FHTY+V+W P ++IFLVD IPIRVFKN E+ GV +PK+QPMK   SLW ADDWAT+GG VKTDW
Sbjct:   26 FYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDW 205
[Close]
BLAST of CX303400 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.041e-76
Identity = 129/180 (71.67%), Postives = 153/180 (85.00%), Query Frame = 2 
Query:  125 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKNLLSLWNADDWATRGGLVKTDW 664
            FY  FD+TWG  RA IF  GQLL+ +LD+ SGSGFQSK++YLFG+IDM++KLV G+SAGTVTAYYLSS+G T DEIDFEFLGNV+GQPY++HTN+F  GKGNRE QFYLWFDPT +FHTY+V+W P ++IFLVD IPIRVFKN E+ GV +PK+QPMK   SLW ADDWAT+GG VKTDW
Sbjct:   27 FYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDW 206
[Close]
BLAST of CX303400 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 1.360e-76
Identity = 124/180 (68.89%), Postives = 154/180 (85.56%), Query Frame = 2 
Query:  125 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKNLLSLWNADDWATRGGLVKTDW 664
            F  +FD+TWGD R K+ N G+LL+LSLDR SGSGFQ+K++YLFG+IDMQLKLV G+SAGTVTAYYL S+G T DEIDFEFLGN++G PY +HTN++ QGKG+REQQF+LWFDPT +FHTYSV+W P H++F+VD+IP+R FKN + +G+ +PK QPM+   SLWNAD WATRGGLVKTDW
Sbjct:   30 FDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTWDEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDW 209
[Close]
BLAST of CX303400 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.504e-75
Identity = 129/180 (71.67%), Postives = 149/180 (82.78%), Query Frame = 2 
Query:  125 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKNLLSLWNADDWATRGGLVKTDW 664
            F +D ++TWGD R +I N G LL+LSLD+ SGSGFQSK +YLFG+IDMQ+KLVAG+SAGTVTAYYL S G T DEIDFEFLGN+SG PY LHTN+F QGKG+REQQF LWFDPT +FHTYS++W PQ +IF VD  PIR FKN ES G  FPKNQPM+   SLWNA++WATRGGLVKTDW
Sbjct:   26 FQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDW 205
[Close]
BLAST of CX303400 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 4.375e-75
Identity = 127/180 (70.56%), Postives = 150/180 (83.33%), Query Frame = 2 
Query:  125 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKNLLSLWNADDWATRGGLVKTDW 664
            F  D ++ WG+ R KI N GQLL+LSLD+ SGSGFQSK +YLFG+IDMQ+KLV G+SAGTVT +YL S+G T DEIDFEFLGN+SG PY LHTN++ QGKG++EQQF+LWFDPT NFHTYS++W PQ +I  VD+ PIR FKN ESLGV FPKN+PM+   SLWNADDWATRGGLVKTDW
Sbjct:   24 FNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDW 203
[Close]
BLAST of CX303400 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 7.462e-75
Identity = 125/180 (69.44%), Postives = 147/180 (81.67%), Query Frame = 2 
Query:  125 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKNLLSLWNADDWATRGGLVKTDW 664
            F QD D+TWGD R  I N G LL+L LD+ SGSGFQSK +YL+G++DMQ+KLV G+SAGTVT +YL SQG T DEIDFEFLGNVSG PYI+HTN++ QGKG+REQQFYLWFDPT  FH YS++W P H++F +D  PIR FKN E LGV +PKNQPM+   SLWNADDWATRGGLVKT+W
Sbjct:   28 FNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGLTWDEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNW 207
[Close]
BLAST of CX303400 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.400e-73
Identity = 124/180 (68.89%), Postives = 147/180 (81.67%), Query Frame = 2 
Query:  125 FYQDFDLTWGDKRAKIFNGGQLLSLSLDRVSGSGFQSKRDYLFGRIDMQLKLVAGDSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGQPYILHTNIFAQGKGNREQQFYLWFDPTRNFHTYSVIWKPQHVIFLVDNIPIRVFKNAESLGVPFPKNQPMKNLLSLWNADDWATRGGLVKTDW 664
            F +D ++TWGD R +I N G+LL+LSLD+ SGSGFQSK +YLFG++ MQ+KLV G+SAGTVT  YL S G T DEIDFEFLGN SG+PY LHTN++ QGKG++EQQF LWFDPT NFHTY+++W PQ +IF VD  PIR FKN ESLG  FPKN+PM+   SLWNADDWATRGGLVKTDW
Sbjct:   23 FQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKSPGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDW 202
The following BLAST results are available for this feature:
BLAST of CX303400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
BRU1_SOYBN7.668e-9690.00Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH16_ARATH2.553e-9182.78Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH15_ARATH2.161e-9082.22Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH13_ARATH1.606e-7772.22Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH1.041e-7671.67Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH25_ARATH1.360e-7668.89Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH23_ARATH1.504e-7571.67Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH4.375e-7570.56Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH21_ARATH7.462e-7569.44Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH22_ARATH2.400e-7368.89Xyloglucan endotransglucosylase/hydrolase protein ... [more]

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Properties
Property NameValue
Genbank descriptionC08030G12SK PhyRootSw1 Citrus sinensis cDNA clone C08030G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX303400 ID=CX303400; Name=CX303400; organism=Citrus sinensis; type=EST; length=665bp
CTCTCTCTTGTTGTGTTATAACTCATACAGCAAATTAAGAACTATGGGTT
ATCATTATTCTTGTAATGGGTTGTTGTTATTGGTGAGTGTTTTGATGGTT
GTTGCCTCATCAGCTGTGGGTAGCTTCTATCAAGACTTTGATTTAACATG
GGGTGATAAGAGAGCTAAGATTTTCAATGGCGGCCAACTTCTTTCTCTGT
CTCTAGACAGAGTTTCTGGCTCTGGTTTTCAGTCCAAGAGAGACTACTTA
TTTGGCAGAATTGATATGCAGCTCAAGCTTGTTGCTGGTGACTCTGCTGG
CACTGTCACTGCCTACTATCTGTCTTCGCAAGGGCCGACTCATGATGAGA
TTGATTTTGAGTTCTTGGGAAATGTGAGCGGTCAGCCTTACATTCTTCAC
ACAAATATATTCGCTCAGGGTAAAGGCAACCGGGAGCAACAATTCTATCT
CTGGTTTGATCCCACAAGAAACTTCCACACTTACTCCGTCATCTGGAAGC
CCCAACACGTCATCTTCTTGGTAGATAACATTCCCATTAGAGTGTTCAAA
AATGCTGAATCTCTTGGAGTTCCCTTCCCTAAAAACCAACCAATGAAGAA
TTTACTCAGTCTTTGGAATGCTGATGACTGGGCTACAAGAGGAGGGTTGG
TGAAAACTGACTGGA
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