EY664202 | Citrus Genome Database

Overview


Name	EY664202
Unique Name	EY664202
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	815

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY664202 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 2.299e-100
Identity = 172/240 (71.67%), Postives = 184/240 (76.67%), Query Frame = 1

Query:    7 LDSNNLSGQIPVHLFQIPKYNFTGNNLNCGKTLPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFLCKGRHKGYKREVFVDVAGEVDRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRDIKPGEPVLDWVTRKRVALGAARGLEYLMSIAIPK 726
            LDSN+LSGQIP  LF+IPKYNFT NNLNCG   PH                                    F  CK RHKGY+R+VFVDVAGEVDRRIAFGQLKR++WRELQLATDNFSEKNVLGQGGFGKVY+GVL D TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT TERLLVYPFMQNLS+A+RLR+IK G+PVLDW TRKR+ALGAARG EYL     PK
Sbjct:  173 LDSNSLSGQIPQSLFEIPKYNFTSNNLNCGGRQPHPCVSAVAHSGDSSKPKTGIIAGVVAGVTVVLFGILLFLFCKDRHKGYRRDVFVDVAGEVDRRIAFGQLKRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPK 412

HSP 2 Score: 48.521 bits (114), Expect = 2.299e-100
Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 3

Query:  705 HEHCNP*DIHRDVKAANVLLDERFE 779
            HEHCNP  IHRDVKAANVLLDE FE
Sbjct:  406 HEHCNPKIIHRDVKAANVLLDEDFE 430

[Close]

BLAST of EY664202 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.024e-58
Identity = 102/156 (65.38%), Postives = 120/156 (76.92%), Query Frame = 1

Query:  259 EVFVDVAGEVDRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRDIKPGEPVLDWVTRKRVALGAARGLEYLMSIAIPK 726
            ++F DV  E D  +  GQLKR+S RELQ+A+D FS KN+LG+GGFGKVY+G LADGT VAVKRL +  +PGG+  FQ EVEMIS+AVHRNLLRL GFC TPTERLLVYP+M N SVA  LR+  P +P LDW TRKR+ALG+ARGL YL     PK
Sbjct:  269 DIFFDVPAEEDPEVHLGQLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPK 424

HSP 2 Score: 45.8246 bits (107), Expect = 1.024e-58
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 3

Query:  705 HEHCNP*DIHRDVKAANVLLDERFE 779
            H+HC+P  IHRDVKAAN+LLDE FE
Sbjct:  418 HDHCDPKIIHRDVKAANILLDEEFE 442

[Close]

BLAST of EY664202 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.012e-55
Identity = 99/154 (64.29%), Postives = 116/154 (75.32%), Query Frame = 1

Query:  265 FVDVAGEVDRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRDIKPGEPVLDWVTRKRVALGAARGLEYLMSIAIPK 726
            F DV  E D  +  GQLKR+S RELQ+A+DNFS KN+LG+GGFGKVY+G LADGT VAVKRL +  + GG+  FQ EVEMIS+AVHRNLLRL GFC TPTERLLVYP+M N SVA  LR+    +P LDW  R+R+ALG+ARGL YL     PK
Sbjct:  258 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 411

HSP 2 Score: 45.8246 bits (107), Expect = 1.012e-55
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 3

Query:  705 HEHCNP*DIHRDVKAANVLLDERFE 779
            H+HC+P  IHRDVKAAN+LLDE FE
Sbjct:  405 HDHCDPKIIHRDVKAANILLDEEFE 429

[Close]

BLAST of EY664202 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.319e-55
Identity = 99/157 (63.06%), Postives = 118/157 (75.16%), Query Frame = 1

Query:  256 REVFVDVAGEVDRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRDIKPGEPVLDWVTRKRVALGAARGLEYLMSIAIPK 726
            +E F DV  E D  +  GQLKR+S RELQ+ATD+FS KN+LG+GGFGKVY+G LADGT VAVKRL +  +PGG+  FQ EVEMIS+AVHRNLLRL GFC TPTERLLVYP+M N SVA  LR+  P +  L W  R+++ALG+ARGL YL     PK
Sbjct:  271 QEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPK 427

HSP 2 Score: 45.8246 bits (107), Expect = 1.319e-55
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 3

Query:  705 HEHCNP*DIHRDVKAANVLLDERFE 779
            H+HC+P  IHRDVKAAN+LLDE FE
Sbjct:  421 HDHCDPKIIHRDVKAANILLDEEFE 445

[Close]

BLAST of EY664202 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 9.181e-54
Identity = 97/147 (65.99%), Postives = 111/147 (75.51%), Query Frame = 1

Query:  265 FVDVAGEVDRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRDIKPGEPVLDWVTRKRVALGAARGLEYL 705
            F DV  E D  +  GQLKR++ REL +ATDNFS KNVLG+GGFGKVY+G LADG  VAVKRL +  + GG+  FQ EVEMIS+AVHRNLLRL GFC TPTERLLVYP+M N SVA  LR+   G P LDW  RK +ALG+ARGL YL
Sbjct:  263 FFDVPAEEDPEVHLGQLKRFTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYL 409

HSP 2 Score: 42.743 bits (99), Expect = 9.181e-54
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 3

Query:  705 HEHCNP*DIHRDVKAANVLLDERFE 779
            H+HC+   IHRDVKAAN+LLDE FE
Sbjct:  410 HDHCDQKIIHRDVKAANILLDEEFE 434

[Close]

BLAST of EY664202 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 2.174e-49
Identity = 91/147 (61.90%), Postives = 109/147 (74.15%), Query Frame = 1

Query:  265 FVDVAGEVDRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRDIKPGEPVLDWVTRKRVALGAARGLEYL 705
            F+DV  E D  +  GQ KR+S REL +AT+ FS++NVLG+G FG +Y+G LAD T VAVKRL +  + GG+  FQ EVEMIS+AVHRNLLRL GFC TPTERLLVYP+M N SVA  LR+   G P LDW  RK +ALG+ARGL YL
Sbjct:  244 FLDVPAEEDPEVYLGQFKRFSLRELLVATEKFSKRNVLGKGRFGILYKGRLADDTLVAVKRLNEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYL 390

HSP 2 Score: 40.0466 bits (92), Expect = 2.174e-49
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 3

Query:  705 HEHCNP*DIHRDVKAANVLLDERFE 779
            H+HC+   IH DVKAAN+LLDE FE
Sbjct:  391 HDHCDQKIIHLDVKAANILLDEEFE 415

[Close]

BLAST of EY664202 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.808e-48
Identity = 90/146 (61.64%), Postives = 102/146 (69.86%), Query Frame = 1

Query:  289 DRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRDIKPGEPVLDWVTRKRVALGAARGLEYLMSIAIPK 726
            D     G LKR+S+RE+Q AT NFS KN+LGQGGFG VY+G L +GT VAVKRL D     G+  FQ EVEMI +AVHRNLLRL GFC TP ER+LVYP+M N SVA RLRD    +P LDW  R  +ALGAARGL YL     PK
Sbjct:  277 DYEFEIGHLKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKD-PIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPK 421

HSP 2 Score: 45.8246 bits (107), Expect = 6.808e-48
Identity = 20/27 (74.07%), Postives = 22/27 (81.48%), Query Frame = 3

Query:  705 HEHCNP*DIHRDVKAANVLLDERFEXL 785
            HE CNP  IHRDVKAAN+LLDE FE +
Sbjct:  415 HEQCNPKIIHRDVKAANILLDESFEAI 441

[Close]

BLAST of EY664202 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.776e-46
Identity = 82/143 (57.34%), Postives = 104/143 (72.73%), Query Frame = 1

Query:  298 IAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRDIKPGEPVLDWVTRKRVALGAARGLEYLMSIAIPK 726
            +  G L+ +++REL +ATD FS K++LG GGFG VYRG   DGT VAVKRL D     G++ F+ E+EMIS+AVHRNLLRLIG+C + +ERLLVYP+M N SVA RL+     +P LDW TRK++A+GAARGL YL     PK
Sbjct:  279 LGLGNLRSFTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLK----AKPALDWNTRKKIAIGAARGLFYLHEQCDPK 417

HSP 2 Score: 43.1282 bits (100), Expect = 2.776e-46
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 3

Query:  705 HEHCNP*DIHRDVKAANVLLDERFE 779
            HE C+P  IHRDVKAAN+LLDE FE
Sbjct:  411 HEQCDPKIIHRDVKAANILLDEYFE 435

[Close]

BLAST of EY664202 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 4.636e-29
Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 1

Query:  316 KRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRDIKPGEPVLDWVTRKRVALGAARGLEYLMSIAIP 723
            K  S  EL  +T+NFS+ N++G GGFG VY+    DG+K AVKRL+  +    +  FQ EVE +S A H+NL+ L G+C    +RLL+Y FM+N S+ Y L +   G   L W  R ++A GAARGL YL  +  P
Sbjct:  740 KDLSVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSG-DCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEP 874

HSP 2 Score: 39.2762 bits (90), Expect = 4.636e-29
Identity = 16/25 (64.00%), Postives = 21/25 (84.00%), Query Frame = 3

Query:  705 HEHCNP*DIHRDVKAANVLLDERFE 779
            H+ C P  IHRDVK++N+LLDE+FE
Sbjct:  869 HKVCEPNVIHRDVKSSNILLDEKFE 893

[Close]

BLAST of EY664202 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.332e-28
Identity = 58/120 (48.33%), Postives = 80/120 (66.67%), Query Frame = 1

Query:  346 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRDIKPGEPVLDWVTRKRVALGAARGLEYL 705
            +T +F++ N++G GGFG VY+  L DGTKVA+KRL+  ++   D  FQ EVE +S A H NL+ L+G+C    ++LL+Y +M N S+ Y L +   G P LDW TR R+A GAA GL YL
Sbjct:  739 STSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLSG-DTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYL 857

HSP 2 Score: 32.7278 bits (73), Expect = 1.332e-28
Identity = 11/24 (45.83%), Postives = 18/24 (75.00%), Query Frame = 3

Query:  705 HEHCNP*DIHRDVKAANVLLDERF 776
            H+ C P  +HRD+K++N+LL + F
Sbjct:  858 HQSCEPHILHRDIKSSNILLSDTF 881

The following BLAST results are available for this feature:

BLAST of EY664202 vs. ExPASy Swiss-Prot

BLAST of EY664202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241


Match Name	E-value	Identity	Description
Y5129_ARATH	2.299e-100	71.67	Probable LRR receptor-like serine/threonine-protei...	[more]
SERK1_ARATH	1.024e-58	65.38	Somatic embryogenesis receptor kinase 1 OS=Arabido...	[more]
BAK1_ARATH	1.012e-55	64.29	BRASSINOSTEROID INSENSITIVE 1-associated receptor ...	[more]
SERK2_ARATH	1.319e-55	63.06	Somatic embryogenesis receptor kinase 2 OS=Arabido...	[more]
SERK4_ARATH	9.181e-54	65.99	Somatic embryogenesis receptor kinase 4 OS=Arabido...	[more]
SERK5_ARATH	2.174e-49	61.90	Somatic embryogenesis receptor kinase 5 OS=Arabido...	[more]
Y5457_ARATH	6.808e-48	61.64	Probable LRR receptor-like serine/threonine-protei...	[more]
Y2239_ARATH	2.776e-46	57.34	Probable LRR receptor-like serine/threonine-protei...	[more]
PSKR2_ARATH	4.636e-29	44.85	Phytosulfokine receptor 2 OS=Arabidopsis thaliana ...	[more]
PSKR1_DAUCA	1.332e-28	48.33	Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-064-A05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY664202 ID=EY664202; Name=EY664202; organism=Citrus sinensis; type=EST; length=815bp
ATTCATCTGGATTCGAATAATCTCAGTGGTCAAATTCCAGTGCATTTGTT
CCAAATTCCAAAATACAATTTCACGGGAAACAACTTGAACTGTGGTAAAA
CTCTTCCACATTCTTGTGAATCTAGTAGCAATGATTCAGGGAGTTCAAAG
AAGCCAAAGATTGGAATTATAGTTGGAATTGTTGGAGGACTTATAGTTCT
TATTTCTGGAGGCTTACTATTTTTTCTGTGTAAGGGTAGACATAAAGGCT
ACAAGCGTGAAGTATTTGTAGATGTTGCAGGTGAAGTTGACCGAAGAATT
GCATTTGGTCAACTGAAAAGATATTCATGGAGGGAATTACAGTTGGCTAC
AGACAATTTCAGCGAAAAAAATGTCCTTGGACAGGGAGGTTTTGGAAAAG
TTTATAGAGGAGTCCTTGCTGATGGCACAAAAGTTGCTGTGAAGCGATTA
ACTGATTTTGAGAGTCCTGGGGGAGATGCTGCTTTCCAGCGTGAAGTTGA
AATGATAAGTGTAGCTGTCCACAGAAATCTATTACGACTGATTGGATTTT
GCACAACACCTACTGAACGTCTCTTGGTGTATCCATTTATGCAGAACTTG
AGTGTAGCCTATCGCTTACGAGATATTAAACCTGGAGAGCCTGTTTTGGA
CTGGGTTACAAGAAAACGAGTGGCATTAGGTGCAGCACGTGGCCTGGAAT
ATCTCATGAGCATTGCAATCCCTAAGACATACATCGGGATGTGAAAGCTG
CAAATGTATTACTGGATGAAAGATTTGAGCANTTGNTGGTGACTTTGGAT
GGCAAAATTGGTGGA