CV713279

Overview
NameCV713279
Unique NameCV713279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV713279 vs. ExPASy Swiss-Prot
Match: CYB6_CITSI (Cytochrome b6 OS=Citrus sinensis GN=petB PE=3 SV=2)

HSP 1 Score: 367.851 bits (943), Expect = 3.011e-102
Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 3 
Query:   39 FXCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 587
            F CLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct:   33 FYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215

HSP 2 Score: 26.1794 bits (56), Expect = 3.011e-102
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2 
Query:   17 VPPHVNIFYXSG 52
            VPPHVNIFY  G
Sbjct:   26 VPPHVNIFYCLG 37
[Close]
BLAST of CV713279 vs. ExPASy Swiss-Prot
Match: CYB6_MORIN (Cytochrome b6 OS=Morus indica GN=petB PE=3 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 4.302e-101
Identity = 180/183 (98.36%), Postives = 180/183 (98.36%), Query Frame = 3 
Query:   39 FXCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 587
            F CLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct:   33 FYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTETNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215

HSP 2 Score: 26.1794 bits (56), Expect = 4.302e-101
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2 
Query:   17 VPPHVNIFYXSG 52
            VPPHVNIFY  G
Sbjct:   26 VPPHVNIFYCLG 37
[Close]
BLAST of CV713279 vs. ExPASy Swiss-Prot
Match: CYB6_EUCGG (Cytochrome b6 OS=Eucalyptus globulus subsp. globulus GN=petB PE=3 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 4.302e-101
Identity = 180/183 (98.36%), Postives = 180/183 (98.36%), Query Frame = 3 
Query:   39 FXCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 587
            F CLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct:   33 FYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215

HSP 2 Score: 26.1794 bits (56), Expect = 4.302e-101
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2 
Query:   17 VPPHVNIFYXSG 52
            VPPHVNIFY  G
Sbjct:   26 VPPHVNIFYCLG 37
[Close]
BLAST of CV713279 vs. ExPASy Swiss-Prot
Match: CYB6_OENEH (Cytochrome b6 OS=Oenothera elata subsp. hookeri GN=petB PE=3 SV=2)

HSP 1 Score: 362.844 bits (930), Expect = 9.553e-101
Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 3 
Query:   39 FXCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 587
            F CLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVP+AIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct:   33 FYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215

HSP 2 Score: 26.1794 bits (56), Expect = 9.553e-101
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2 
Query:   17 VPPHVNIFYXSG 52
            VPPHVNIFY  G
Sbjct:   26 VPPHVNIFYCLG 37
[Close]
BLAST of CV713279 vs. ExPASy Swiss-Prot
Match: CYB6_MAIZE (Cytochrome b6 OS=Zea mays GN=petB PE=2 SV=2)

HSP 1 Score: 362.844 bits (930), Expect = 9.553e-101
Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 3 
Query:   39 FXCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 587
            F CLGGITLTCFLVQVATGFAMTFYYRPTVTEAF+SVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct:   33 FYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215

HSP 2 Score: 26.1794 bits (56), Expect = 9.553e-101
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2 
Query:   17 VPPHVNIFYXSG 52
            VPPHVNIFY  G
Sbjct:   26 VPPHVNIFYCLG 37
[Close]
BLAST of CV713279 vs. ExPASy Swiss-Prot
Match: CYB6_TOBAC (Cytochrome b6 OS=Nicotiana tabacum GN=petB PE=2 SV=2)

HSP 1 Score: 362.459 bits (929), Expect = 1.246e-100
Identity = 178/183 (97.27%), Postives = 180/183 (98.36%), Query Frame = 3 
Query:   39 FXCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 587
            F CLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQ+GYWAVKIVTGVP+AIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct:   33 FYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQVGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215

HSP 2 Score: 26.1794 bits (56), Expect = 1.246e-100
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2 
Query:   17 VPPHVNIFYXSG 52
            VPPHVNIFY  G
Sbjct:   26 VPPHVNIFYCLG 37
[Close]
BLAST of CV713279 vs. ExPASy Swiss-Prot
Match: CYB6_WHEAT (Cytochrome b6 OS=Triticum aestivum GN=petB PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.122e-100
Identity = 178/183 (97.27%), Postives = 180/183 (98.36%), Query Frame = 3 
Query:   39 FXCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 587
            F CLGGITLTCFLVQVATGFAMTFYYRPTVTEAF+SVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVP+AIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct:   33 FYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215

HSP 2 Score: 26.1794 bits (56), Expect = 2.122e-100
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2 
Query:   17 VPPHVNIFYXSG 52
            VPPHVNIFY  G
Sbjct:   26 VPPHVNIFYCLG 37
[Close]
BLAST of CV713279 vs. ExPASy Swiss-Prot
Match: CYB6_SPIOL (Cytochrome b6 OS=Spinacia oleracea GN=petB PE=1 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.122e-100
Identity = 178/183 (97.27%), Postives = 180/183 (98.36%), Query Frame = 3 
Query:   39 FXCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 587
            F CLGGITLTCFLVQVATGFAMTFYYRPTVT+AFASVQYIMTEVNFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVL VLTASFGVTGYSLPWDQIGYWAVKIVTGVP+AIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct:   33 FYCLGGITLTCFLVQVATGFAMTFYYRPTVTDAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215

HSP 2 Score: 26.1794 bits (56), Expect = 2.122e-100
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2 
Query:   17 VPPHVNIFYXSG 52
            VPPHVNIFY  G
Sbjct:   26 VPPHVNIFYCLG 37
[Close]
BLAST of CV713279 vs. ExPASy Swiss-Prot
Match: CYB6_ORYSJ (Cytochrome b6 OS=Oryza sativa subsp. japonica GN=petB PE=3 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.122e-100
Identity = 178/183 (97.27%), Postives = 180/183 (98.36%), Query Frame = 3 
Query:   39 FXCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 587
            F CLGGITLTCFLVQVATGFAMTFYYRPTVTEAF+SVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVP+AIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct:   33 FYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215

HSP 2 Score: 26.1794 bits (56), Expect = 2.122e-100
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2 
Query:   17 VPPHVNIFYXSG 52
            VPPHVNIFY  G
Sbjct:   26 VPPHVNIFYCLG 37
[Close]
BLAST of CV713279 vs. ExPASy Swiss-Prot
Match: CYB6_ORYSI (Cytochrome b6 OS=Oryza sativa subsp. indica GN=petB PE=3 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.122e-100
Identity = 178/183 (97.27%), Postives = 180/183 (98.36%), Query Frame = 3 
Query:   39 FXCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 587
            F CLGGITLTCFLVQVATGFAMTFYYRPTVTEAF+SVQYIMTE NFGWLIRSVHRWSASMMVLM ILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVP+AIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct:   33 FYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215

HSP 2 Score: 26.1794 bits (56), Expect = 2.122e-100
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 2 
Query:   17 VPPHVNIFYXSG 52
            VPPHVNIFY  G
Sbjct:   26 VPPHVNIFYCLG 37
The following BLAST results are available for this feature:
BLAST of CV713279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYB6_CITSI3.011e-10299.45Cytochrome b6 OS=Citrus sinensis GN=petB PE=3 SV=2[more]
CYB6_MORIN4.302e-10198.36Cytochrome b6 OS=Morus indica GN=petB PE=3 SV=1[more]
CYB6_EUCGG4.302e-10198.36Cytochrome b6 OS=Eucalyptus globulus subsp. globul... [more]
CYB6_OENEH9.553e-10197.81Cytochrome b6 OS=Oenothera elata subsp. hookeri GN... [more]
CYB6_MAIZE9.553e-10197.81Cytochrome b6 OS=Zea mays GN=petB PE=2 SV=2[more]
CYB6_TOBAC1.246e-10097.27Cytochrome b6 OS=Nicotiana tabacum GN=petB PE=2 SV... [more]
CYB6_WHEAT2.122e-10097.27Cytochrome b6 OS=Triticum aestivum GN=petB PE=2 SV... [more]
CYB6_SPIOL2.122e-10097.27Cytochrome b6 OS=Spinacia oleracea GN=petB PE=1 SV... [more]
CYB6_ORYSJ2.122e-10097.27Cytochrome b6 OS=Oryza sativa subsp. japonica GN=p... [more]
CYB6_ORYSI2.122e-10097.27Cytochrome b6 OS=Oryza sativa subsp. indica GN=pet... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002J10_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002J10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713279 ID=CV713279; Name=CV713279; organism=Citrus sinensis; type=EST; length=732bp
ATAACTAGTAAATANCGTTCCTCCTCATGTCAACATATTTTATNTGTCTG
GGAGGAATTACGCTCACTTGTTTTTTAGTACAAGTAGCTACAGGGTTTGC
TATGACTTTTTACTACCGCCCGACCGTTACTGAGGCTTTTGCCTCTGTTC
AATACATAATGACGGAAGTTAACTTCGGGTGGTTAATTCGATCGGTTCAT
CGATGGTCGGCAAGTATGATGGTCCTAATGACAATCCTGCACGTATTTCG
CGTGTATCTCACCGGGGGTTTTAAAAAACCTCGCGAATTGACTTGGGTTA
CAGGTGTGGTTCTGGCTGTATTGACCGCATCTTTTGGTGTAACAGGTTAT
TCTTTACCTTGGGACCAAATTGGATATTGGGCAGTAAAAATTGTAACAGG
CGTGCCCGAAGCAATTCCGGTAATAGGATCGCCTTTGGTAGAGTTATTAC
GCGGAAGTGCTAGTGTGGGACAGTCCACTTTGACTCGTTTTTATAGTTTA
CACACTTTTGTATTACCTCTTCTTACTGCCGTATTTATGTTAATGCATTT
CCTAATGATACGTAAACAAGGTATTTCTGGCCCTTTATAAAATTATACAA
AATCTAGATTATAGCGATTTGTAATCAACCCTTTATCTTATTGCTTGGGG
GAGGAACAATAATATTTCATTGCTACAAATATGGATTATTGACAAAGAAT
AAGACATGGAGTTGGAAATTTCCCCTCAACTC
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