CV713174

Overview
NameCV713174
Unique NameCV713174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: P2C60_ARATH (Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 1.114e-77
Identity = 139/189 (73.54%), Postives = 165/189 (87.30%), Query Frame = -3
Query:  293 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAP-SAGGEGCDNMTMILVQFKILSNNGPSAAEQPPSDQQSK 856
            TACVA++RDKQL VANAGDSRCV+SRK QA NLS+DHKPDLE EK+RILKAGGFI  GRVNGSLNL+RAIGD+EFK NK LP+EKQIVTA+PD++T+ELCDDD+FLV+ACDGIWDC++SQ+LVDF+ +QL +ETKLSV+CEKV DRCLAP ++GGEGCDNMTMILV+FK   N  PS  E  P   Q++
Sbjct:  162 TACVAVVRDKQLFVANAGDSRCVISRKNQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLSRAIGDMEFKQNKFLPSEKQIVTASPDVNTVELCDDDDFLVLACDGIWDCMTSQQLVDFIHEQLNSETKLSVVCEKVLDRCLAPNTSGGEGCDNMTMILVRFK---NPTPSETELKPEASQAE 347          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: P2C21_ARATH (Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.584e-76
Identity = 138/194 (71.13%), Postives = 165/194 (85.05%), Query Frame = -3
Query:  278 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAP-SAGGEGCDNMTMILVQFKILSNNGPSAAEQPPSDQQSKLASSS 856
            TACVA+I+DK+L VANAGDSRCV+SRK QA NLSKDHKPDLEVEK+RILKAGGFI  GR+NGSLNL RAIGD+EFK NK LP+EKQ+VTA+PDI+TI+LCDDD+FLV+ACDGIWDC+SSQELVDF+ +QL +ETKLS +CEKV DRCLAP +A GEGCDNMT+ILVQFK  + +     +  P   + + +SSS
Sbjct:  162 TACVALIKDKKLFVANAGDSRCVISRKSQAYNLSKDHKPDLEVEKERILKAGGFIHAGRINGSLNLTRAIGDMEFKQNKFLPSEKQMVTADPDINTIDLCDDDDFLVVACDGIWDCMSSQELVDFIHEQLKSETKLSTVCEKVVDRCLAPDTATGEGCDNMTIILVQFKKPNPSETEPEDSKPEPSEDEPSSSS 355          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: P2C58_ORYSJ (Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.569e-74
Identity = 132/189 (69.84%), Postives = 162/189 (85.71%), Query Frame = -3
Query:  299 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSA-GGEGCDNMTMILVQFK--ILSNNGPSAAEQPPSDQQ 856
            TACVAI+R+ QLVVANAGDSRCV+SR GQA NLS+DHKP+LE E++RILKAGG+IQ+GRVNG++NL+RAIGD+EFK NK L  +KQ++TANPDI+T+ELCDDD+FLV+ACDGIWDC+SSQ+LVDF+ + +  E+ LS +CE+V DRCLAPS  GGEGCDNMTMILVQFK  I  N   S AEQ  +D+Q
Sbjct:  162 TACVAIVRNSQLVVANAGDSRCVISRNGQAYNLSRDHKPELEAERERILKAGGYIQMGRVNGTINLSRAIGDIEFKQNKFLSPDKQMLTANPDINTVELCDDDDFLVLACDGIWDCMSSQQLVDFIHEHINTESSLSAVCERVLDRCLAPSTLGGEGCDNMTMILVQFKKPISQNKNVSPAEQSAADKQ 350          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: P2C11_ORYSJ (Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.709e-73
Identity = 131/183 (71.58%), Postives = 154/183 (84.15%), Query Frame = -3
Query:  317 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSA-GGEGCDNMTMILVQFK--ILSNNGPSAAEQ 856
            TACVA+IR+ QLVVANAGDSRCV+SR GQA NLS+DHKP+LE E+DRI+KAGGFI +GR+NGSLNL RAIGD+EFK NK LP EKQIVTANPDI+ +ELCDDD+FLV+ACDGIWDC+SSQ+LVDF+ + +  E+ LS +CE+V DRCLAPS  GGEGCDNMTM+LVQFK  I  N      EQ
Sbjct:  162 TACVALIRNNQLVVANAGDSRCVISRAGQAYNLSRDHKPELEAERDRIVKAGGFIHMGRINGSLNLTRAIGDMEFKQNKFLPPEKQIVTANPDINVVELCDDDDFLVLACDGIWDCMSSQQLVDFIHEHIQKESSLSAVCERVLDRCLAPSTIGGEGCDNMTMVLVQFKKPITQNKKADVGEQ 344          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: P2C70_ORYSJ (Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 6.128e-68
Identity = 122/189 (64.55%), Postives = 156/189 (82.54%), Query Frame = -3
Query:  293 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNN-GPSAAEQPPSDQQSK 856
            TACVAIIR+ +L+VANAGDSRCVLSRKG+A +LSKDHKPDL+ EK+RIL AGGFI  GRVNGSLNLARAIGD+E K N+ LPAE+QIVTA P+++T++L +DDEF+V+ACDGIWDC+SSQE+VDFV  ++  E  LS +CEK+ D CLAP +GG+GCDNMT+I+V+FK  S +   S+  Q  S ++ +
Sbjct:  161 TACVAIIRNDELIVANAGDSRCVLSRKGRAYDLSKDHKPDLDAEKERILNAGGFIVAGRVNGSLNLARAIGDMELKQNEFLPAERQIVTAEPELNTVKLSEDDEFIVLACDGIWDCMSSQEVVDFVHKEMNTEDSLSAVCEKLLDHCLAPVSGGDGCDNMTVIIVKFKKPSKSAATSSTNQSVSSEEMR 349          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: Y0417_DROME (Probable protein phosphatase CG10417 OS=Drosophila melanogaster GN=CG10417 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.161e-50
Identity = 101/196 (51.53%), Postives = 142/196 (72.45%), Query Frame = -3
Query:  278 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGE--GCDNMTMILVQFKILSNNGPSAAEQPPSDQQSKLASSS 856
            TA V +++ + L VANAGDSRCV+SR GQA+ +S DHKP+ + E  RI+KAGG + + GRVNG LNL+RA+GD  +K N +LPAE+Q+++A PDI  + +  +DEF+V+ACDGIW+ +SS+E+V+FVR +L +  KLS ICE++FD CLAP+  G+  GCDNMT ++VQFK       S    PP+  + KL  +S
Sbjct:  395 TAVVCLLQGRDLYVANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKAGGRVTLDGRVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKLIITPEDEFMVLACDGIWNYMSSEEVVEFVRCRLKDNKKLSTICEELFDNCLAPNTMGDGTGCDNMTAVIVQFKKKLQELQSTI--PPNQTEDKLLKTS 588          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: PPM1G_BOVIN (Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 3.735e-49
Identity = 108/209 (51.67%), Postives = 147/209 (70.33%), Query Frame = -3
Query:  260 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETK------LSVICEKVFDRCLAP--SAGGEGCDNMTMILVQFKILSNNGPSAAEQPPSDQQS-KLASSSAGTESN 856
            TA VA+IR KQL+VANAGDSRCV+S  G+AL++S DHKP+ EVE  RI  AGG + + GRVNG LNL+RAIGD  +K NK+LP E+Q+++A PDI  + L DD EF+VIACDGIW+ +SSQE++DF++ +++   +      LS I E++ D+CLAP  S  G GCDNMT I++ FK  +    +AA QP S ++  +   S+ G E N
Sbjct:  328 TAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVIDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFKPRN----TAAPQPESGKRKLEEVLSTEGAEEN 532          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: PPM1G_MACFA (Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.878e-49
Identity = 109/210 (51.90%), Postives = 144/210 (68.57%), Query Frame = -3
Query:  260 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETK------LSVICEKVFDRCLAP--SAGGEGCDNMTMILVQFKILSNNGPSAAEQPPSDQQSKLAS--SSAGTESN 856
            TA VA+IR KQL+VANAGDSRCV+S  G+AL++S DHKP+ EVE  RI  AGG + + GRVNG LNL+RAIGD  +K NK+LP E+Q+++A PDI  + L DD EF+VIACDGIW+ +SSQE+VDF++ +++   +      LS I E++ D+CLAP  S  G GCDNMT I++ FK       + AE  P   + KL    S+ G E N
Sbjct:  331 TAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK-----PRNTAELQPESGKRKLEEVLSTEGAEEN 535          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: PPM1G_HUMAN (Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.878e-49
Identity = 109/210 (51.90%), Postives = 144/210 (68.57%), Query Frame = -3
Query:  260 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETK------LSVICEKVFDRCLAP--SAGGEGCDNMTMILVQFKILSNNGPSAAEQPPSDQQSKLAS--SSAGTESN 856
            TA VA+IR KQL+VANAGDSRCV+S  G+AL++S DHKP+ EVE  RI  AGG + + GRVNG LNL+RAIGD  +K NK+LP E+Q+++A PDI  + L DD EF+VIACDGIW+ +SSQE+VDF++ +++   +      LS I E++ D+CLAP  S  G GCDNMT I++ FK       + AE  P   + KL    S+ G E N
Sbjct:  330 TAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK-----PRNTAELQPESGKRKLEEVLSTEGAEEN 534          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: PPM1G_MOUSE (Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3)

HSP 1 Score: 190.66 bits (483), Expect = 9.200e-48
Identity = 99/177 (55.93%), Postives = 132/177 (74.58%), Query Frame = -3
Query:  353 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETK------LSVICEKVFDRCLAP--SAGGEGCDNMTMILVQFK 856
            TA VA+IR KQL+VANAGDSRCV+S  G+AL++S DHKP+ EVE  RI  AGG + + GRVNG LNL+RAIGD  +K NK+LP ++Q+++A PDI  + L DD EF+VIACDGIW+ +SSQE+VDF++ +++   +      LS I E++ D+CLAP  S  G GCDNMT I++ FK
Sbjct:  327 TAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPQEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK 503          
The following BLAST results are available for this feature:
BLAST of CV713174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
P2C60_ARATH1.114e-7773.54Probable protein phosphatase 2C 60 OS=Arabidopsis ... [more]
P2C21_ARATH3.584e-7671.13Probable protein phosphatase 2C 21 OS=Arabidopsis ... [more]
P2C58_ORYSJ2.569e-7469.84Probable protein phosphatase 2C 58 OS=Oryza sativa... [more]
P2C11_ORYSJ3.709e-7371.58Probable protein phosphatase 2C 11 OS=Oryza sativa... [more]
P2C70_ORYSJ6.128e-6864.55Probable protein phosphatase 2C 70 OS=Oryza sativa... [more]
Y0417_DROME1.161e-5051.53Probable protein phosphatase CG10417 OS=Drosophila... [more]
PPM1G_BOVIN3.735e-4951.67Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2... [more]
PPM1G_MACFA4.878e-4951.90Protein phosphatase 1G OS=Macaca fascicularis GN=P... [more]
PPM1G_HUMAN4.878e-4951.90Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE... [more]
PPM1G_MOUSE9.200e-4855.93Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002G23_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713174 ID=CV713174; Name=CV713174; organism=Citrus sinensis; type=EST; length=858bp
GCTCACATTGTGGAATTGAAAGACACTATTCTCAGTAGTGATTTCAATTT
TGAAAACAAACCAGAGTAAAAGTACACACATGTACAGAGATCTTTAAGGA
TTATCTATCCCATTAAAATGAAAAAGCTTAAATATTTACAACCAAATCAT
GAGAATCGTTTTCCGAATGTAAAATCAGGGACCATGGTTCTGAGCTCAGC
AGTGTTTCAGACAGTAGAAAATGAGTACCATTTAGTCAGTGCAAAGAGTG
CTACAGCTAATTCGATTCAGTCCCTGCTGAACTGCTGGCTAACTTGGATT
GTTGGTCAGATGGTGGCTGCTCAGCCGCAGAAGGACCATTATTAGAAAGA
ATTTTAAACTGAACCAAGATCATGGTCATGTTGTCGCATCCTTCACCACC
AGCTGATGGAGCCAAGCACCGATCGAATACTTTCTCGCAAATGACTGATA
GTTTTGTTTCGTTGGTTAATTGATCCCTGACAAAATCGACAAGTTCTTGA
CTTGAAAGGCAATCCCAAATCCCATCACAAGCTATGACAAGAAACTCATC
GTCATCACAAAGTTCAATAGTACTTATATCAGGATTGGCAGTCACAATCT
GTTTTTCAGCAGGCAAACTTTTGTTTAGCTTGAACTCCACATCTCCAATA
GCTCTCGCCAAATTTAAACTTCCATTAACACGTCCAACTTGTATAAAACC
ACCAGCTTTGAGAATTCTATCTTTCTCAACCTCAAGATCAGGCTTATGGT
CTTTAGATAGATTAAGTGCCTGGCCCTTCCTCGATAACACACAACGAGAA
TCACCAGCATTTGCAACCACGAGTTGCTTGTCTCTAATGATTGCTACGCA
AGCTGTAC
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