CV713171
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV713171 vs. ExPASy Swiss-Prot
Match: YCF68_EUCGG (Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.802e-37 Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = -2 Query: 176 LRRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG 307 +RRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG Sbjct: 1 MRRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG 44 HSP 2 Score: 79.337 bits (194), Expect = 3.802e-37 Identity = 40/58 (68.97%), Postives = 41/58 (70.69%), Query Frame = -1 Query: 3 GFENKLLLRRIDGAIQVRSNVDPTFYSLVXXXXXXXXXXXXXXXDNPYIPYQCMDSYL 176 GFE K LLRRIDGAIQVRSNVDPTFYSLV +NPYIPYQCMDSYL Sbjct: 44 GFETKPLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDPHGSSLLENPYIPYQCMDSYL 101
BLAST of CV713171 vs. ExPASy Swiss-Prot
Match: YCF68_PINTH (Uncharacterized protein ycf68 OS=Pinus thunbergii GN=ycf68 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.748e-12 Identity = 40/71 (56.34%), Postives = 43/71 (60.56%), Query Frame = -1 Query: 3 MAYFSC-SNRGFENKLLLRRIDGAIQVRSNVDPTFYSLV---XXXXXXXXXXXXXXXDNPYIPYQCMDSYL 203 MAY SC GF +L+LRRIDGAIQVRSN DPTFYS V +NPYIPYQCMD YL Sbjct: 1 MAYSSCLCEPGFGTELILRRIDGAIQVRSNTDPTFYSFVDLGGPGVPVVIHLGSSLLENPYIPYQCMDGYL 71
BLAST of CV713171 vs. ExPASy Swiss-Prot
Match: YCF68_PINKO (Uncharacterized protein ycf68 OS=Pinus koraiensis GN=ycf68 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.895e-12 Identity = 40/71 (56.34%), Postives = 43/71 (60.56%), Query Frame = -1 Query: 3 MAYFSCS-NRGFENKLLLRRIDGAIQVRSNVDPTFYSLV---XXXXXXXXXXXXXXXDNPYIPYQCMDSYL 203 MAY SC GF +L+LRRIDGAIQVRSN DPTFYS V +NPYIPYQCMD YL Sbjct: 1 MAYSSCLFEPGFGTELILRRIDGAIQVRSNADPTFYSFVDLGGPGGPVVIHHGSSLLENPYIPYQCMDGYL 71
BLAST of CV713171 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSJ (Uncharacterized protein ycf68 OS=Oryza sativa subsp. japonica GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 2.014e-11 Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = -1 Query: 90 MAYFSCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLV 203 MAY SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV Sbjct: 1 MAYSSCLNRSLKPNKLLLRRIDGAIQVRSHVDLTFYSLV 39 HSP 2 Score: 31.5722 bits (70), Expect = 2.014e-11 Identity = 15/17 (88.24%), Postives = 15/17 (88.24%), Query Frame = -2 Query: 2 LFSIIHTSLISVWTAIS 52 LFS IHTSLISVW AIS Sbjct: 52 LFSRIHTSLISVWRAIS 68
BLAST of CV713171 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSI (Uncharacterized protein ycf68 OS=Oryza sativa subsp. indica GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 2.014e-11 Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = -1 Query: 90 MAYFSCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLV 203 MAY SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV Sbjct: 1 MAYSSCLNRSLKPNKLLLRRIDGAIQVRSHVDLTFYSLV 39 HSP 2 Score: 31.5722 bits (70), Expect = 2.014e-11 Identity = 15/17 (88.24%), Postives = 15/17 (88.24%), Query Frame = -2 Query: 2 LFSIIHTSLISVWTAIS 52 LFS IHTSLISVW AIS Sbjct: 52 LFSRIHTSLISVWRAIS 68
BLAST of CV713171 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSA (Uncharacterized protein ycf68 OS=Oryza sativa GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 2.014e-11 Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = -1 Query: 90 MAYFSCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLV 203 MAY SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV Sbjct: 1 MAYSSCLNRSLKPNKLLLRRIDGAIQVRSHVDLTFYSLV 39 HSP 2 Score: 31.5722 bits (70), Expect = 2.014e-11 Identity = 15/17 (88.24%), Postives = 15/17 (88.24%), Query Frame = -2 Query: 2 LFSIIHTSLISVWTAIS 52 LFS IHTSLISVW AIS Sbjct: 52 LFSRIHTSLISVWRAIS 68
BLAST of CV713171 vs. ExPASy Swiss-Prot
Match: YCF68_ORYNI (Uncharacterized protein ycf68 OS=Oryza nivara GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 2.014e-11 Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = -1 Query: 90 MAYFSCSNRGFE-NKLLLRRIDGAIQVRSNVDPTFYSLV 203 MAY SC NR + NKLLLRRIDGAIQVRS+VD TFYSLV Sbjct: 1 MAYSSCLNRSLKPNKLLLRRIDGAIQVRSHVDLTFYSLV 39 HSP 2 Score: 31.5722 bits (70), Expect = 2.014e-11 Identity = 15/17 (88.24%), Postives = 15/17 (88.24%), Query Frame = -2 Query: 2 LFSIIHTSLISVWTAIS 52 LFS IHTSLISVW AIS Sbjct: 52 LFSRIHTSLISVWRAIS 68 The following BLAST results are available for this feature:
BLAST of CV713171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV713171 ID=CV713171; Name=CV713171; organism=Citrus sinensis; type=EST; length=638bpback to top |