CV713163
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV713163 vs. ExPASy Swiss-Prot
Match: R27A2_ARATH (60S ribosomal protein L27a-2 OS=Arabidopsis thaliana GN=RPL27AB PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.762e-35 Identity = 70/83 (84.34%), Postives = 79/83 (95.18%), Query Frame = -1 Query: 103 LRNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 351 LRNKF CPIVN+DKLWS+VP++VKAK+SKDNVP+IDVTQ G+FKVLGKG LPEN+P VVKAKL+SKTAEKKIKEAGGAVVLTA Sbjct: 64 LRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA 146
BLAST of CV713163 vs. ExPASy Swiss-Prot
Match: R27A3_ARATH (60S ribosomal protein L27a-3 OS=Arabidopsis thaliana GN=RPL27AC PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 1.284e-34 Identity = 69/83 (83.13%), Postives = 79/83 (95.18%), Query Frame = -1 Query: 103 LRNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 351 LRNKF CPIVN+DKLWS+VP++VKAK++KDNVP+IDVTQ G+FKVLGKG LPEN+P VVKAKL+SKTAEKKIKEAGGAVVLTA Sbjct: 64 LRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA 146
BLAST of CV713163 vs. ExPASy Swiss-Prot
Match: RL27A_TETTH (60S ribosomal protein L27a OS=Tetrahymena thermophila GN=RPL27A PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.542e-22 Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = -1 Query: 103 RNKFHCPIVNVDKLWSMVPQEVKAKASKDN--VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 348 +N HCP+VN+DKLWS+V + K ++D VP+IDVT+ G+FKVLGKG LP NQPVVVKAK SKTAE++I GGA VLTA Sbjct: 67 KNPLHCPVVNIDKLWSLVSDATRQKYAEDKKKVPVIDVTKAGFFKVLGKGRLP-NQPVVVKAKYFSKTAERRIVAVGGACVLTA 149
BLAST of CV713163 vs. ExPASy Swiss-Prot
Match: RL27A_OSCBR (60S ribosomal protein L27a OS=Oscheius brevesophaga GN=rpl-27a PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.736e-21 Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = -1 Query: 103 RNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 348 +N +CP VNVD+LW++VP+E K K S + P+ID + GYFKVLGKG+LP+ QP++VKAK S AE KIK AGGA +L A Sbjct: 65 KNHHYCPTVNVDRLWALVPEEQKTKVSAEKAPVIDCVKAGYFKVLGKGLLPK-QPLIVKAKFFSHEAENKIKAAGGACILVA 145
BLAST of CV713163 vs. ExPASy Swiss-Prot
Match: RL27A_DICDI (60S ribosomal protein L27a OS=Dictyostelium discoideum GN=rpl27a PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.350e-20 Identity = 45/86 (52.33%), Postives = 64/86 (74.42%), Query Frame = -1 Query: 103 LRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 351 LRN++HCP V+++K+W++VP+ V+ + N P++DVTQ G+FKVLG G+LP QP++VKA+ SK AEKKIK GGA +L A Sbjct: 64 LRNQYHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFFKVLGHGILP-TQPIIVKARYFSKVAEKKIKAVGGACILVA 148
BLAST of CV713163 vs. ExPASy Swiss-Prot
Match: RL27A_EUPCR (60S ribosomal protein L27a OS=Euplotes crassus GN=RPL27A PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.931e-20 Identity = 48/85 (56.47%), Postives = 65/85 (76.47%), Query Frame = -1 Query: 103 LRNKFHCPIVNVDKLWSMVPQEVKAKASKDN--VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 351 +RN+++CP +N+ KLWS+V +E + KA D V +IDV + GY+KVLGKG+LPE P+VVKAKL + TAEK+IK+ GGA VL A Sbjct: 64 MRNQYYCPSINLSKLWSLVTEEERQKAQTDKSKVILIDVVKHGYYKVLGKGLLPE-VPLVVKAKLFTPTAEKRIKQVGGACVLRA 147
BLAST of CV713163 vs. ExPASy Swiss-Prot
Match: RL27A_PONAB (60S ribosomal protein L27a OS=Pongo abelii GN=RPL27A PE=2 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 9.875e-19 Identity = 46/85 (54.12%), Postives = 62/85 (72.94%), Query Frame = -1 Query: 103 RNKFHCPIVNVDKLWSMVPQEVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 348 RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL A Sbjct: 65 RNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
BLAST of CV713163 vs. ExPASy Swiss-Prot
Match: RL27A_HUMAN (60S ribosomal protein L27a OS=Homo sapiens GN=RPL27A PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 9.875e-19 Identity = 46/85 (54.12%), Postives = 62/85 (72.94%), Query Frame = -1 Query: 103 RNKFHCPIVNVDKLWSMVPQEVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 348 RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL A Sbjct: 65 RNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
BLAST of CV713163 vs. ExPASy Swiss-Prot
Match: RL27A_RAT (60S ribosomal protein L27a OS=Rattus norvegicus GN=Rpl27a PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 1.684e-18 Identity = 46/85 (54.12%), Postives = 62/85 (72.94%), Query Frame = -1 Query: 103 RNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 348 RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL A Sbjct: 65 RNQSFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
BLAST of CV713163 vs. ExPASy Swiss-Prot
Match: RL27A_MACFA (60S ribosomal protein L27a OS=Macaca fascicularis GN=RPL27A PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.684e-18 Identity = 46/85 (54.12%), Postives = 62/85 (72.94%), Query Frame = -1 Query: 103 RNKFHCPIVNVDKLWSMVPQEVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 348 RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+KVLGKG LP+ QPV+VKAK S+ AE+KIK GGA VL A Sbjct: 65 RNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK-QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148 The following BLAST results are available for this feature:
BLAST of CV713163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV713163 ID=CV713163; Name=CV713163; organism=Citrus sinensis; type=EST; length=351bpback to top |