CV713157

Overview
NameCV713157
Unique NameCV713157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713157 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.401e-71
Identity = 127/155 (81.94%), Postives = 145/155 (93.55%), Query Frame = -3
Query:  275 QVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGL--APRAMEKSKIR 733
            Q+VGWPP+RS+RKN+LATT KN+DEVDG+PG GALF+KVSMDGAPYLRKVDLR+YTNYGELSSALEKMF+ FT+GQCGS+ A G++MLSE+KLKDLL+G +YVLTYEDKDGDWMLVGDVPWEMFID CK+LKIMKG DAIGL  APRAMEKSK+R
Sbjct:  183 QIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEKSKMR 337          
BLAST of CV713157 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.457e-68
Identity = 123/152 (80.92%), Postives = 140/152 (92.11%), Query Frame = -3
Query:  281 QVVGWPPIRSFRKNSLAT-TSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSK 733
            QVVGWPPIRS+RKN++A+ TSKN DEVDGKPG G LF+KVSMDGAPYLRKVDLRTYT+Y +LSSALEKMFSCFT+GQCG H A GRE +SE KLKDLLHGSE+VLTYEDKDGDWMLVGDVPWE+F ++C++LKIMKGSD+IGLAP A+EKSK
Sbjct:  165 QVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSK 316          
BLAST of CV713157 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58
Identity = 113/163 (69.33%), Postives = 132/163 (80.98%), Query Frame = -3
Query:  272 QVVGWPPIRSFRKNSLATTSK----NN---DEVDGKPGPG--ALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 733
            QVVGWPPIRSFRKNS+A++      NN   +E + K GP    L++KVSM+GAPYLRK+DL+TY +Y ELSSALEKMFSCFTIGQ GSH   GR+ L+ES+L DLL GSEYV+TYEDKD DWMLVGDVPWEMFI SCK+L+IMK S+AIGLAPR MEK + RN
Sbjct:  143 QVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSRN 305          
BLAST of CV713157 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.860e-56
Identity = 113/161 (70.19%), Postives = 128/161 (79.50%), Query Frame = -3
Query:  272 QVVGWPPIRSFRKNSLATTS-KNNDEVDG---KPGPGAL---FIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 733
            QVVGWPP+RS+RKN LA  + K  D  DG   K G GA    F+KVSMDGAPYLRKVDL+ Y +Y ELS ALEKMFS FTIG CGSH   G   ++ESK+ DLL+GSEYV TYEDKDGDWMLVGDVPWEMF++SCKRL+IMKGS+AIGLAPRAMEK K R+
Sbjct:  120 QVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNG---MNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277          
BLAST of CV713157 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.667e-54
Identity = 104/159 (65.41%), Postives = 124/159 (77.99%), Query Frame = -3
Query:  272 QVVGWPPIRSFRKNSLATTS-----KNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 733
            QVVGWPPIRS+RKN++A +      K++ E    P  G L++KVSMDGAPYLRKVDL+ Y NY ELS ALEKMFSCFT+G   S+   GR+ LS+ +L DL +G+E VLTYEDKD DWMLVGDVPW MF DSC+RL+IMKGSDA+GLAPRA +KSK RN
Sbjct:  108 QVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDKSKNRN 266          
BLAST of CV713157 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.148e-51
Identity = 100/156 (64.10%), Postives = 118/156 (75.64%), Query Frame = -3
Query:  272 QVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAI--GLAPRAMEKSKIRN 733
            QVVGWPP+RSFRKN LA      +E +    P A F+KVSMDGAPYLRKVDL+ Y +Y ELS +L KMFS FT G C S     ++ ++ESKL DLL+ S+YV TYEDKDGDWMLVGDVPWEMF++SCKRL+IMKG +AI  GLAPRAM K K R+
Sbjct:   90 QVVGWPPVRSFRKNMLAVQKSVGEESEKNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGM--KDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKCKNRS 243          
BLAST of CV713157 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.205e-50
Identity = 103/156 (66.03%), Postives = 122/156 (78.21%), Query Frame = -3
Query:  272 QVVGWPPIRSFRKNSLATTS--KNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 733
            QVVGWPPIRS+RKN++AT     + ++ + K G G L++KVSMDGAPYLRKVDL+TY NY +LS+ALEKMF  FT G+ G         LSES+ KD     EYVLTYEDKDGDWMLVGDVPWEMF +SC+RL+IMKGSDAIGLAPRA++KSK RN
Sbjct:  116 QVVGWPPIRSYRKNTMATNQLKSSKEDAEAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDG---------LSESR-KD----GEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGSDAIGLAPRAVDKSKNRN 257          
BLAST of CV713157 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.159e-49
Identity = 99/169 (58.58%), Postives = 124/169 (73.37%), Query Frame = -3
Query:  272 QVVGWPPIRSFRKNSLA-------TTSKNNDEVDGKPGPGA--------LFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 733
            QVVGWPP+RSFRKN ++         ++ ND+  G  G  +         ++KVSMDGAPYLRK+DL+ Y  Y +LS+AL KMFS FTIG  G      ++ ++ESKL DLL+GS+YV TYEDKDGDWMLVGDVPWEMF+DSCKR++IMKGS+AIGLAPRA+EK K R+
Sbjct:   70 QVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS 236          
BLAST of CV713157 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.583e-49
Identity = 101/156 (64.74%), Postives = 116/156 (74.36%), Query Frame = -3
Query:  272 QVVGWPPIRSFRKNSLATTS--KNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 733
            QVVGWPPIRS+RKN++AT     N ++VD K G G L++KVSMDGAPYLRKVDL+TY NY ++S  LEKMF  F+ G+ G+              KD     EYVLTYEDKDGDWMLVGDVPWEMF DSC+RL+IMKGSDAIGLAPRA EKSK RN
Sbjct:  123 QVVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQ-----------KD----GEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEKSKNRN 263          
BLAST of CV713157 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 5.754e-49
Identity = 97/155 (62.58%), Postives = 119/155 (76.77%), Query Frame = -3
Query:  272 QVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGAL-FIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 733
            QVVGWPP+R++RKN +A       E     G G + F+KVSMDGAPYLRKVDL+ YT+Y +LS AL KMFS FT+G  G+      + ++ESK+ DLL+ SEYV +YEDKDGDWMLVGDVPW MF++SCKRL+IMKGS+AIGLAPRAMEK K R+
Sbjct:   76 QVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMI--DFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228          
The following BLAST results are available for this feature:
BLAST of CV713157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
IAA9_ARATH2.401e-7181.94Auxin-responsive protein IAA9 OS=Arabidopsis thali... [more]
IAA8_ARATH1.457e-6880.92Auxin-responsive protein IAA8 OS=Arabidopsis thali... [more]
IAA27_ARATH8.857e-5869.33Auxin-responsive protein IAA27 OS=Arabidopsis thal... [more]
IAA30_ORYSJ4.860e-5670.19Auxin-responsive protein IAA30 OS=Oryza sativa sub... [more]
IAA21_ORYSJ2.667e-5465.41Auxin-responsive protein IAA21 OS=Oryza sativa sub... [more]
AUX28_SOYBN6.148e-5164.10Auxin-induced protein AUX28 OS=Glycine max GN=AUX2... [more]
IAA17_ORYSJ5.205e-5066.03Auxin-responsive protein IAA17 OS=Oryza sativa sub... [more]
IAA16_ARATH1.159e-4958.58Auxin-responsive protein IAA16 OS=Arabidopsis thal... [more]
IAA3_ORYSJ2.583e-4964.74Auxin-responsive protein IAA3 OS=Oryza sativa subs... [more]
IAA14_ARATH5.754e-4962.58Auxin-responsive protein IAA14 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002G14_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002G14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713157 ID=CV713157; Name=CV713157; organism=Citrus sinensis; type=EST; length=804bp
CCTGTCACTATATAGATATATAACTCCACGAATCCTAATTTTCTTAGTAT
CTCAACATGGTTTTACAACAATCATATCATAAACATAGACTTCTTCCAAA
CTTAAAAAAGTAACACAAACCTCATGTAAACAAACAGGATACACAACTAA
ACCACAAACTTGCATCTTGCCCATGCCATCCTGTCCTTTTTAACTTTTCA
TCAACCCAGTCTCCTCCTACCCATGAAAGGCATGAACTAGAAGGCACCCC
ATCCCAGACAGACATTCACTAGTTCCTGATCTTGGATTTTTCCATTGCCC
TGGGAGCTAAGCCAATGGCATCAGAACCTTTCATGATCTTTAATCGCTTG
CATGAATCAATAAACATCTCCCACGGCACATCCCCAACGAGCATCCAGTC
ACCATCCTTGTCCTCATATGTAAGCACATATTCTGATCCATGCAAAAGAT
CCTTCAACTTGCTCTCACTCAGCATTTCCCTCCCTGGTGCTTCATGTGAT
CCACATTGACCAATTGTAAAGCAACTGAACATCTTCTCCAGAGCAGAAGA
TAGTTCCCCATAATTGGTGTATGTTCTCAAATCTACCTTCCTCAAATAAG
GAGCCCCGTCCATGCTAACCTTAATAAAAAGAGCACCAGGACCTGGTTTT
CCATCTACTTCATCATTGTTCTTTGAAGTGGTTGCCAATGAATTCTTCCT
AAATGATCTTATTGGAGGCCAACCCACGACCTGTGCCTTGGCAGCAGGTG
CACTCATGTTGTTGTTAGAAGCAGATGCCTTGTTGTGTGTTCCATTGGCG
GCAG
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