CV713084

Overview
NameCV713084
Unique NameCV713084
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713084 vs. ExPASy Swiss-Prot
Match: MALQ_CHLTR (4-alpha-glucanotransferase OS=Chlamydia trachomatis GN=malQ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.329e-12
Identity = 60/182 (32.97%), Postives = 88/182 (48.35%), Query Frame = 3
Query:   30 LPALLNSSDMMACGEDLGLIPSCVHPVMEELGLIGLRIQRMPS--EPGLEFGIPSQYNYMTVCAPSCHDCSTLRAWWXXXXXXXXXFFKNVVGSDALPPSQCLPDITHF-ILRQHVESPSMWAIFPLQDLLALKEDYSTRPATEETINDP-TNPRHYWRYRVHVTLESLQKDKELKTTVKDL 563
            L  LL SS M+  GEDLG IPS V  ++E   + G RI R     E    +    QY+ ++V + S HD STL +WW         F + +     LP S  L    H  IL+   ++ S++ I  + D LAL  D  ++    E IN P T  ++ W YRV  ++E L    +L + ++ L
Sbjct:  349 LSHLLTSSSMLPIGEDLGTIPSDVKRMLESFAVCGTRIPRWERNWEGNGAYTPFDQYDPLSVTSLSTHDSSTLASWWKESPQESKLFAQFL----GLPYSSTLSLHNHTEILKLSHKTSSIFRINLINDYLALFPDLISKTPRYERINLPGTISKNNWVYRVKPSIEDLSSHSKLNSLLEAL 526          
BLAST of CV713084 vs. ExPASy Swiss-Prot
Match: MALQ_CHLPN (4-alpha-glucanotransferase OS=Chlamydia pneumoniae GN=malQ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.329e-12
Identity = 59/183 (32.24%), Postives = 81/183 (44.26%), Query Frame = 3
Query:   30 LPALLNSSDMMACGEDLGLIPSCVHPVMEELGLIGLRIQRMPS--EPGLEFGIPSQYNYMTVCAPSCHDCSTLRAWWXXXXXXXXXFFKNVVGSDALPPSQCLPDITHF-ILRQHVESPSMWAIFPLQDLLALKEDYSTRPATEETINDP-TNPRHYWRYRVHVTLESLQKDKELKTTVKDLV 566
            L  +L +S M+  GEDLG+IP  V   +  LG+ G RI R     E    F     YN ++V   S HD  T   WW         F K +     LP  + L   T   IL+   ES S++ I    D LAL  D  ++    E IN P T  +  W YRV  +LE L   K+    ++ ++
Sbjct:  345 LSTMLGASSMLPIGEDLGIIPQDVKTTLTHLGICGTRIPRWERNWESDSAFIPLKDYNPLSVTTLSTHDSDTFAQWWLNSPKEAKQFAKFL----HLPFQKTLTTETQIDILKLSHESASIFHINLFNDYLALCPDLVSKNLQRERINTPGTISKKNWSYRVRPSLEELAIHKKFNGYIEKIL 523          
BLAST of CV713084 vs. ExPASy Swiss-Prot
Match: MALQ_CHLMU (4-alpha-glucanotransferase OS=Chlamydia muridarum GN=malQ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.961e-12
Identity = 60/182 (32.97%), Postives = 87/182 (47.80%), Query Frame = 3
Query:   30 LPALLNSSDMMACGEDLGLIPSCVHPVMEELGLIGLRIQRMPSE-PGLEFGIP-SQYNYMTVCAPSCHDCSTLRAWWXXXXXXXXXFFKNVVGSDALPPSQCLPDITH-FILRQHVESPSMWAIFPLQDLLALKEDYSTRPATEETINDP-TNPRHYWRYRVHVTLESLQKDKELKTTVKDL 563
            L  LL +S M+  GEDLG IP  V   +E L + G RI R   +  G    IP  QYN ++V + S HD STL  WW         F + +     +P +  L    H  IL+   ++ S++ I  + D LAL  D  +    +E IN P T  ++ W YRV  ++E L    +L + +  L
Sbjct:  349 LSHLLKASSMLPIGEDLGTIPVDVKQALESLAVCGTRIPRWERDWEGTGAYIPFDQYNPLSVTSLSTHDSSTLALWWQEAPQEARLFAQFL----GMPYTPSLSFHNHKEILKLSHKTSSIFHINLINDYLALCPDLISTNPLQERINLPGTISKNNWVYRVKPSIEQLSAHSKLNSLLASL 526          
The following BLAST results are available for this feature:
BLAST of CV713084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MALQ_CHLTR1.329e-1232.974-alpha-glucanotransferase OS=Chlamydia trachomati... [more]
MALQ_CHLPN1.329e-1232.244-alpha-glucanotransferase OS=Chlamydia pneumoniae... [more]
MALQ_CHLMU2.961e-1232.974-alpha-glucanotransferase OS=Chlamydia muridarum ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0002E23_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002E23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713084 ID=CV713084; Name=CV713084; organism=Citrus sinensis; type=EST; length=887bp
CCCCTTTGGAGGGAAATGCTTTGAAGACGCTACCTGCCCTCCTGAACTCA
TCAGATATGATGGCTTGTGGGGAAGATCTTGGGCTTATTCCTTCCTGTGT
TCATCCTGTTATGGAAGAATTGGGGTTAATAGGTTTGCGCATTCAACGCA
TGCCTAGTGAACCTGGACTGGAGTTTGGTATTCCTTCTCAGTACAACTAC
ATGACGGTGTGTGCTCCATCTTGCCATGATTGCTCCACCCTTCGTGCTTG
GTGGGAAGAAGATGAGGAAAGAAGACGGCGATTTTTCAAGAATGTGGTGG
GCTCTGATGCATTGCCACCTAGTCAATGTCTCCCTGATATCACACATTTC
ATTCTAAGGCAGCACGTTGAATCACCATCAATGTGGGCAATTTTCCCTCT
TCAGGACTTGTTAGCACTAAAAGAAGATTACAGCACTCGCCCTGCTACAG
AGGAAACAATCAATGATCCTACGAATCCAAGACACTATTGGAGATACCGT
GTACATGTCACGTTGGAGTCTTTACAGAAGGATAAAGAACTGAAAACGAC
CGTTAAAGATCTTGTTTGTGCGAGTGGAAGGTCATGTCCTCCAGGGGGTC
AGGAAGTAGCATCCAATACTCGGGATAAGCAGCAGGTTGCCAGTAGCCAA
GAAAAGAACCCTATATCAAAGCCGCTAAGTGGAGTTCCACAGAAGGGAAC
CGTTGCTGTGGTGTAGGTTTTCAGATGCTGTGAGACCAGAAATAGTTGAG
CCGAACCTGGTAGAACTGAGGTTAGATATTGGATGGACTTATGCACGAAG
CACTAGTCATAATCAGCCCTATACTTCCCCTCCGTCAAAATGGCAATATT
TACGGGCATATTCTGAAGTTATTTATCTTCTTTATGT
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