CV713074

Overview
NameCV713074
Unique NameCV713074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length750
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713074 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.309e-68
Identity = 131/159 (82.39%), Postives = 141/159 (88.68%), Query Frame = -1
Query:  274 NAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 750
            NAGITRD LLMRMKKSQWQ+VIDLNLTGVFLCTQ          KGRIINIASVVGLVGN GQANYSAAKAGVIG TKTVA+EYASRNINVNA+APGFI+SDMT+KLG+D+ KKILE IPLGRYGQPEEVAGLVEFLA+NPA+ Y+TGQV TIDGGM M
Sbjct:  162 NAGITRDGLLMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDMTSKLGDDINKKILETIPLGRYGQPEEVAGLVEFLAINPASSYVTGQVFTIDGGMTM 320          
BLAST of CV713074 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.147e-64
Identity = 125/159 (78.62%), Postives = 137/159 (86.16%), Query Frame = -1
Query:  274 NAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 750
            NAGITRDTLL+RMKKSQW +VIDLNLTGVFLCTQ          KGRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+VAGLVEFLAL+PAA YITGQ  TIDGG+ +
Sbjct:  157 NAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 315          
BLAST of CV713074 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.147e-64
Identity = 125/159 (78.62%), Postives = 137/159 (86.16%), Query Frame = -1
Query:  274 NAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 750
            NAGITRDTLL+RMKKSQW +VIDLNLTGVFLCTQ          KGRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+VAGLVEFLAL+PAA YITGQ  TIDGG+ +
Sbjct:  170 NAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 328          
BLAST of CV713074 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.147e-64
Identity = 125/159 (78.62%), Postives = 137/159 (86.16%), Query Frame = -1
Query:  274 NAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 750
            NAGITRDTLL+RMKKSQW +VIDLNLTGVFLCTQ          KGRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+VAGLVEFLAL+PAA YITGQ  TIDGG+ +
Sbjct:  162 NAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 320          
BLAST of CV713074 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.956e-62
Identity = 121/159 (76.10%), Postives = 133/159 (83.65%), Query Frame = -1
Query:  274 NAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 750
            NAGITRDTLL+RMKKSQW +VIDLNLTGVFLCTQ          KGRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE VAGLVEFLAL+PA+ YITG   +I GG  +
Sbjct:  159 NAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEYVAGLVEFLALSPASSYITGHTFSIHGGFAI 317          
BLAST of CV713074 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.312e-60
Identity = 120/159 (75.47%), Postives = 134/159 (84.28%), Query Frame = -1
Query:  274 NAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 750
            NAG   DTLL+RMKKSQW +V+DLNLTGVFLC+Q          KGRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+VAGLVEFLAL+PAA YITGQ  TIDGG+ +
Sbjct:   99 NAG---DTLLIRMKKSQWDEVMDLNLTGVFLCSQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQTFTIDGGIAI 254          
BLAST of CV713074 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 2.922e-60
Identity = 117/159 (73.58%), Postives = 133/159 (83.65%), Query Frame = -1
Query:  274 NAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 750
            NAGITRDTLL+RMK+SQW +VI LNLTGVFLCTQ          +GRIINI+SVVGL+GNIGQANY+AAK GVI  +KT A+E ASRNINVN + PGFIASDMTA+LGED+EKKIL  IPLGRYG+ EEVAGLVEFLAL+PAA YITGQ  TIDGG+ +
Sbjct:  161 NAGITRDTLLIRMKQSQWDEVIALNLTGVFLCTQAAVKIMMKKKRGRIINISSVVGLIGNIGQANYAAAKGGVISFSKTAAREGASRNINVNVVCPGFIASDMTAELGEDMEKKILGTIPLGRYGKAEEVAGLVEFLALSPAASYITGQAFTIDGGIAI 319          
BLAST of CV713074 vs. ExPASy Swiss-Prot
Match: FABG1_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803) GN=fabG1 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.649e-53
Identity = 108/159 (67.92%), Postives = 120/159 (75.47%), Query Frame = -1
Query:  274 NAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 750
            NAGITRDTLL+RMK   WQ VIDLNLTGVFLCT+           GRIINI SV G++GN GQANYSAAKAGVIG TKTVAKE ASR + VNA+APGFIA+DMT  L  +    IL+ IPL RYGQPEEVAG + FLA +PAA YITGQ   +DGGMVM
Sbjct:   91 NAGITRDTLLLRMKLEDWQAVIDLNLTGVFLCTKAVSKLMLKQKSGRIINITSVAGMMGNPGQANYSAAKAGVIGFTKTVAKELASRGVTVNAVAPGFIATDMTENLNAE---PILQFIPLARYGQPEEVAGTIRFLATDPAAAYITGQTFNVDGGMVM 246          
BLAST of CV713074 vs. ExPASy Swiss-Prot
Match: FABG6_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase (Fragments) OS=Brassica napus PE=1 SV=3)

HSP 1 Score: 204.912 bits (520), Expect = 3.826e-52
Identity = 105/139 (75.54%), Postives = 117/139 (84.17%), Query Frame = -1
Query:  274 VIDLNLTGVFLCTQXXXXXXXXXXKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 690
            VI LNLTGVFLC+Q          KGRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + PGFIAS+MTAKLGED+EKKIL  IPLGRYGQPE+VAGLVEFLAL+PAA YITGQ  TIDGG+ +
Sbjct:   63 VIALNLTGVFLCSQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASEMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQTFTIDGGIAI 201          
BLAST of CV713074 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 2.566e-48
Identity = 97/159 (61.01%), Postives = 124/159 (77.99%), Query Frame = -1
Query:  274 NAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 750
            NAGITRD L+MRMK+ +W DVI++NL GVF CT+           GRIIN++S+VG+ GN GQANY AAKAGVIGLTK+ AKE ASRNI VNAIAPGFI++DMT KL +D++ ++L++IPL R+G+P +V+ +V FLA +  A Y+TGQ L IDGGMVM
Sbjct:   89 NAGITRDNLIMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAKDVQDEMLKQIPLARFGEPSDVSSVVTFLA-SEGARYMTGQTLHIDGGMVM 246          
The following BLAST results are available for this feature:
BLAST of CV713074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
FABG_CUPLA1.309e-6882.393-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
FABG3_BRANA1.147e-6478.623-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]
FABG2_BRANA1.147e-6478.623-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
FABG1_BRANA1.147e-6478.623-oxoacyl-[acyl-carrier-protein] reductase 1, chlo... [more]
FABG5_BRANA6.956e-6276.103-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]
FABG4_BRANA1.312e-6075.473-oxoacyl-[acyl-carrier-protein] reductase 4 (Frag... [more]
FABG_ARATH2.922e-6073.583-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
FABG1_SYNY32.649e-5367.923-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Sy... [more]
FABG6_BRANA3.826e-5275.543-oxoacyl-[acyl-carrier-protein] reductase (Fragme... [more]
FABG_BACSU2.566e-4861.013-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002E16_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002E16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713074 ID=CV713074; Name=CV713074; organism=Citrus sinensis; type=EST; length=750bp
TTTTTTTTTTTTTTTTTATGTATCACCCAAAAACTACATTCCATAATGCC
AATTTGAAGTACAACAAATGTTACGCGCCTCATGTTTGGTTTTTGCAACA
TGCTTAGCTTAAATTCTACCAAAACTTACCTGAATTTTTATTTCATAACA
ACACTTTGGCAACATTTCCTCATAGGATCATAAAGCAGACAAAGTTTCAA
CCCAGTCGATCTTACATATGAGAGCTACAGGTCAGAACTGAAACTAAACC
AGGCAGAATGGGTCACTGACCTACATAACCATTCCTCCGTCAATAGTAAG
CACCTGTCCAGTAATGTAACCGGCAGCGGGATTGAGGGCCAAGAATTCCA
CCAGTCCAGCAACTTCTTCAGGTTGGCCATACCTTCCTAAGGGGATTTTC
TCCAAGATCTTCTTTTCTAGGTCTTCGCCAAGCTTGGCGGTCATATCAGA
CGCGATGAATCCTGGTGCAATAGCATTGACATTAATGTTTCTGCTTGCAT
ATTCCTTTGCAACAGTTTTTGTCAGGCCAATAACACCTGCTTTTGCAGCA
CTGTAATTGGCTTGGCCAATATTTCCAACCAGACCAACAACTGATGCTAT
ATTGATTATTCTTCCCTTTTTCTTCTTCATCATGATTTTGGCTGCTGCCT
GTGTACACAGGAATACACCTGTAAGATTCAGATCGATAACGTCCTGCCAT
TGTGACTTCTTCATTCTCATGAGCAATGTATCTCTAGTGATTCCTGCATT
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