CV713073

Overview
NameCV713073
Unique NameCV713073
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 3.110e-73
Identity = 136/212 (64.15%), Postives = 166/212 (78.30%), Query Frame = 2
Query:  119 LMAAVAGSNIVAFKSAATSAKFGDRKIPQFRQWSPVQVKALPRPSVELKSRWNSSFPSSGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGK 754
            +   VA + + + K+     K G R+I Q RQWSP+Q  A+P   +       S   S+ ++AQ   +EQ+T EA   VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAEEV K+IEA GGQA+TFGGDVSKEADVE+M+KTA+DAWGT+D+++NNAGITRDTLL+RMKKSQW +VIDLNLTGVFLCTQAA KIMMKK KG+
Sbjct:    1 MATTVAATKLTSLKAVK---KLGFREIRQVRQWSPLQ-SAMPHFGMLRCGSRQSFATSTVVKAQATAVEQSTGEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGR 208          

HSP 2 Score: 29.261 bits (64), Expect = 3.110e-73
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  750 GRIINIASVVGLVG 791
            GRIINIASVVGL+G
Sbjct:  207 GRIINIASVVGLIG 220          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 2.603e-72
Identity = 146/211 (69.19%), Postives = 163/211 (77.25%), Query Frame = 2
Query:  125 AAVAG-SNIVAFKSAATSAKFGDRKIPQFRQWSPVQVKALPRPSVELKSRWNSSFPSSGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGK 754
            A  AG S  VA KS       G R++   +Q SPV        +         S  +SGIRAQVAT E+ +  A Q+VE+PV +VTGASRGIG+A+A SLGKAGCKVLVNYARSSKEAEEV KEIEA GGQALTFGGDVSKE DVE+MIKTAVDAWGTVDIL+NNAGITRD LLMRMKKSQWQ+VIDLNLTGVFLCTQAAAKIMMKK+KG+
Sbjct:    4 ATAAGCSGAVALKS------LGGRRLCIPQQLSPVLAGFGSHAAKSFPILSTRSIATSGIRAQVATAEKVSAGAGQSVESPVVIVTGASRGIGKAIALSLGKAGCKVLVNYARSSKEAEEVSKEIEAFGGQALTFGGDVSKEEDVEAMIKTAVDAWGTVDILVNNAGITRDGLLMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGR 208          

HSP 2 Score: 29.6462 bits (65), Expect = 2.603e-72
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  750 GRIINIASVVGLVG 791
            GRIINIASVVGLVG
Sbjct:  207 GRIINIASVVGLVG 220          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 5.775e-72
Identity = 136/212 (64.15%), Postives = 167/212 (78.77%), Query Frame = 2
Query:  119 LMAAVAGSNIVAFKSAATSAKFGDRKIPQFRQWSPVQVKALPRPSVELKSRWNSSFPSSGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGK 754
            +   VA + + + K+     K G R+I Q RQW+P+Q  ++P       SR  S   S+ ++AQ   +EQ+T EA   VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAEEV K+IEA GGQA+TFGGDVSKEADVE+M+KTA+DAWGT+D+++NNAGITRDTLL+RMKKSQW +VIDLNLTGVFLCTQAA KIMMKK KG+
Sbjct:    1 MATTVAATKLTSLKAVK---KLGFREIRQVRQWTPLQ-SSMPH----FGSR-QSFATSTVVKAQATAVEQSTGEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGR 203          

HSP 2 Score: 29.261 bits (64), Expect = 5.775e-72
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  750 GRIINIASVVGLVG 791
            GRIINIASVVGL+G
Sbjct:  202 GRIINIASVVGLIG 215          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 5.273e-70
Identity = 132/208 (63.46%), Postives = 160/208 (76.92%), Query Frame = 2
Query:  131 VAGSNIVAFKSAATSAKFGDRKIPQFRQWSPVQVKALPRPSVELKSRWNSSFPSSGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGK 754
            VA + + + K  AT+ K G R+I Q RQW+P++      P   +     S+   +  +AQ    EQ T EA   VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAEEV K+IE  GG+A+TFGGDVSKEADV+SM+KTAVD WGT+D+++NNAGITRDTLL+RMKKSQW +VIDLNLTGVFLCTQAA KIMMKK KG+
Sbjct:    3 VAATKLTSLK--ATAGKLGYREICQVRQWAPLKSAM---PHFGMLRCATSTVVKAQAQAQATATEQTTEEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEEYGGEAITFGGDVSKEADVDSMMKTAVDKWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGR 205          

HSP 2 Score: 29.261 bits (64), Expect = 5.273e-70
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  750 GRIINIASVVGLVG 791
            GRIINIASVVGL+G
Sbjct:  204 GRIINIASVVGLIG 217          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.988e-69
Identity = 135/214 (63.08%), Postives = 164/214 (76.64%), Query Frame = 2
Query:  128 AVAGSNIVAFKSAATSAKFGDRKIPQFRQWSPVQVKALPRPSVELKSRWNSSFPSSGI---RAQVATIEQATNE--AAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGK 754
            ++AG  + + K+AA   K G R+I   RQW+PV         +   SR   +  SS +   +AQ    EQ+T E  A   VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAE+V K+IEA GGQA+TFGGDVSKEADV++M+KTAVDAWGT+D+++NNAGITRDTLL+RMKKSQW +VIDLNLTGVFLCTQAA KIMMKK KG+
Sbjct:    5 SIAGPRLTSLKTAA--GKLGYREICHVRQWAPVHSPMPHFGMLRCGSRRPFATSSSTVVQAQAQATAAEQSTGEEEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEQVSKQIEAYGGQAITFGGDVSKEADVDAMMKTAVDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGR 216          

HSP 2 Score: 29.261 bits (64), Expect = 1.988e-69
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  750 GRIINIASVVGLVG 791
            GRIINIASVVGL+G
Sbjct:  215 GRIINIASVVGLIG 228          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 6.274e-68
Identity = 127/212 (59.91%), Postives = 164/212 (77.36%), Query Frame = 2
Query:  119 LMAAVAGSNIVAFKSAATSAKFGDRKIPQFRQWSPVQVKALPRPSVELKSRWNSSFPSSGIRAQVATIEQATNEAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGK 754
            + AAVA   +++ K+ A   K G R+I Q RQ +P+   A+P   + L+ R    F +S ++AQ    EQ+  E  Q VE+PV V+TGASRGIG+A+A +LGKAGCKVLVNYARS+KEAEEV K+IE  GGQA+TFGGDVSK  DV++M+KTA+D WGT+D+++NNAGITRDTLL+RMK+SQW +VI LNLTGVFLCTQAA KIMMKK++G+
Sbjct:    1 MAAAVAAPRLISLKAVA---KLGFREISQIRQLAPLH-SAIPHFGM-LRCRSRQPFSTSVVKAQATATEQSPGEVVQKVESPVVVITGASRGIGKAIALALGKAGCKVLVNYARSAKEAEEVAKQIEEYGGQAITFGGDVSKATDVDAMMKTALDKWGTIDVVVNNAGITRDTLLIRMKQSQWDEVIALNLTGVFLCTQAAVKIMMKKKRGR 207          

HSP 2 Score: 28.1054 bits (61), Expect = 6.274e-68
Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  750 GRIINIASVVGLVG 791
            GRIINI+SVVGL+G
Sbjct:  206 GRIINISSVVGLIG 219          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 2.315e-58
Identity = 106/139 (76.26%), Postives = 124/139 (89.21%), Query Frame = 2
Query:  338 EAAQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGK 754
            EA   VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAEEV K+IE  GGQA+TFGGDVSKEADV++M+KTAVD WGT+D+++NNAG   DTLL+RMKKSQW +V+DLNLTGVFLC+QAA KIMMKK KG+
Sbjct:    7 EAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEEYGGQAITFGGDVSKEADVDAMMKTAVDKWGTIDVVVNNAG---DTLLIRMKKSQWDEVMDLNLTGVFLCSQAATKIMMKKRKGR 142          

HSP 2 Score: 29.261 bits (64), Expect = 2.315e-58
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  750 GRIINIASVVGLVG 791
            GRIINIASVVGL+G
Sbjct:  141 GRIINIASVVGLIG 154          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: FABG1_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803) GN=fabG1 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 5.372e-38
Identity = 74/132 (56.06%), Postives = 101/132 (76.52%), Query Frame = 2
Query:  359 APVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGK 754
            A VA+VTGASRGIG+A A +L   G KV+VNYA+SS  A+ V  EI A+GG+A+    +V+   +V+ +IKT +D +  +D+L+NNAGITRDTLL+RMK   WQ VIDLNLTGVFLCT+A +K+M+K++ G+
Sbjct:    6 AQVALVTGASRGIGKATALALAATGMKVVVNYAQSSTAADAVVAEIIANGGEAIAVQANVANADEVDQLIKTTLDKFSRIDVLVNNAGITRDTLLLRMKLEDWQAVIDLNLTGVFLCTKAVSKLMLKQKSGR 137          

HSP 2 Score: 24.6386 bits (52), Expect = 5.372e-38
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  750 GRIINIASVVGLVG 791
            GRIINI SV G++G
Sbjct:  136 GRIINITSVAGMMG 149          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 142.51 bits (358), Expect = 8.822e-35
Identity = 67/129 (51.94%), Postives = 94/129 (72.87%), Query Frame = 2
Query:  368 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGK 754
            A+VTGASRGIGR++A  L K+G  V+VNY+ +  +A EV  EI++ G +A+    DVS   DV++MIK  +  + T+DIL+NNAGITRD L+MRMK+ +W DVI++NL GVF CT+A  + MMK+  G+
Sbjct:    7 AIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIKSMGRKAIAVKADVSNPEDVQNMIKETLSVFSTIDILVNNAGITRDNLIMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGR 135          

HSP 2 Score: 24.2534 bits (51), Expect = 8.822e-35
Identity = 9/14 (64.29%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  750 GRIINIASVVGLVG 791
            GRIIN++S+VG+ G
Sbjct:  134 GRIINVSSIVGVSG 147          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.864e-30
Identity = 65/128 (50.78%), Postives = 88/128 (68.75%), Query Frame = 2
Query:  368 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKG 751
            A+VTGASRGIGR++A  L + G  V VNYA S  +AE V +EI+A G ++     +V+K  +V+ MIK  V  +G+VD+L+NNAGIT+D LLMRMK+ +W DVID NL GVF C Q     M+++  G
Sbjct:    5 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSG 132          
The following BLAST results are available for this feature:
BLAST of CV713073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
FABG1_BRANA3.110e-7364.153-oxoacyl-[acyl-carrier-protein] reductase 1, chlo... [more]
FABG_CUPLA2.603e-7269.193-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
FABG3_BRANA5.775e-7264.153-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]
FABG5_BRANA5.273e-7063.463-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]
FABG2_BRANA1.988e-6963.083-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
FABG_ARATH6.274e-6859.913-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
FABG4_BRANA2.315e-5876.263-oxoacyl-[acyl-carrier-protein] reductase 4 (Frag... [more]
FABG1_SYNY35.372e-3856.063-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Sy... [more]
FABG_BACSU8.822e-3551.943-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
FABG_STAES5.864e-3050.783-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002E16_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002E16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713073 ID=CV713073; Name=CV713073; organism=Citrus sinensis; type=EST; length=793bp
TTTTGGTTGGCTTGTATAAAAAGGGAGCGAGCAAGGAAGCGTCTCTCGAA
GCCATTACCACAAAACTTCATTTCTGGCTACCCTCTTGTCTTGGATTATT
TCGTTTCGCGGAAAACCTCTCATGGCTGCCGTCGCCGGATCCAACATTGT
CGCGTTCAAATCGGCGGCTACTTCCGCGAAATTCGGTGACCGAAAAATCC
CGCAGTTTCGTCAATGGTCTCCTGTTCAGGTTAAGGCTCTGCCTCGCCCT
TCCGTTGAGCTCAAGAGTAGATGGAACAGCTCCTTCCCTTCTTCTGGAAT
CAGAGCTCAGGTTGCCACCATAGAACAAGCAACCAATGAAGCAGCACAAA
ATGTGGAAGCTCCTGTGGCTGTGGTGACTGGTGCCTCTAGGGGTATTGGC
AGAGCAGTAGCGACGTCCTTGGGAAAAGCAGGTTGCAAGGTCCTGGTAAA
TTATGCTAGGTCATCAAAGGAAGCCGAAGAAGTTTGCAAAGAGATTGAGG
CATCTGGCGGTCAGGCTCTTACTTTTGGTGGAGATGTTTCCAAAGAAGCT
GATGTGGAATCAATGATCAAAACTGCTGTCGATGCTTGGGGAACTGTTGA
TATATTGATTAACAATGCAGGAATCACTAGAGATACATTGCTCATGAGAA
TGAAGAAGTCACAATGGCAGGACGTTATCGATCTGAATCTTACAGGTGTA
TTCCTGTGTACACAGGCAGCAGCCAAAATCATGATGAAGAAAGAAAAAGG
GAAGAATAATCAATATAGCATCAGTTGTTGGTCTGGTTGGAAA
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