CV713069

Overview
NameCV713069
Unique NameCV713069
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713069 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.036e-48
Identity = 90/103 (87.38%), Postives = 96/103 (93.20%), Query Frame = -2
Query:  538 SLLIPPTTLFIINXXXXXXGISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMWVRINPFVSKDGPVLEICGLNC 846
            SLLIPPTTL IIN      G+SDAINNGYDSWGPLFGRLFFALWVI+HLYPFLKGLLGKQDR+PTIILVWSILLASILTL+WVR+NPFVSKDGPVLEICGL+C
Sbjct:  984 SLLIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRVPTIILVWSILLASILTLLWVRVNPFVSKDGPVLEICGLDC 1086          
BLAST of CV713069 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 6.476e-46
Identity = 87/103 (84.47%), Postives = 94/103 (91.26%), Query Frame = -2
Query:  538 SLLIPPTTLFIINXXXXXXGISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMWVRINPFVSKDGPVLEICGLNC 846
            SLLIPPTTL IIN      GISDAI+NGYDSWGPLFGRLFFA WVI+HLYPFLKGLLGKQDRMPTIILVWSILLASILTL+WVR+NPFV+K GP+LEICGL+C
Sbjct:  966 SLLIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNPFVAKGGPILEICGLDC 1068          
BLAST of CV713069 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.458e-46
Identity = 85/103 (82.52%), Postives = 95/103 (92.23%), Query Frame = -2
Query:  538 SLLIPPTTLFIINXXXXXXGISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMWVRINPFVSKDGPVLEICGLNC 846
            +LLIPPTTL IIN      G+SDAI+NGYDSWGPLFGRLFFALWVI+HLYPFLKG+LGKQD+MPTII+VWSILLASILTL+WVR+NPFV+K GPVLEICGLNC
Sbjct:  980 TLLIPPTTLLIINIIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIVHLYPFLKGMLGKQDKMPTIIVVWSILLASILTLLWVRVNPFVAKGGPVLEICGLNC 1082          
BLAST of CV713069 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.884e-45
Identity = 86/103 (83.50%), Postives = 94/103 (91.26%), Query Frame = -2
Query:  538 SLLIPPTTLFIINXXXXXXGISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMWVRINPFVSKDGPVLEICGLNC 846
            SLLIPP TL IIN      G+SDAI+NGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTII+VWSILLASILTL+WVR+NPFV+K GP+LEICGL+C
Sbjct:  981 SLLIPPMTLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIIVVWSILLASILTLLWVRVNPFVAKGGPILEICGLDC 1083          
BLAST of CV713069 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.001e-38
Identity = 72/105 (68.57%), Postives = 93/105 (88.57%), Query Frame = -2
Query:  535 SLLIPPTTLFIINXXXXXXGISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMWVRINPFVSK-DGPVLEICGLNCD 846
            +LLIPPTTL ++N      G+S+AINNGY+SWGPLFG+LFFA WVI+HLYPFLKGL+G+Q+R PTI++VWSILLASI +L+WVRI+PF++K DGP+LE CGL+C+
Sbjct:  988 TLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDCN 1092          
BLAST of CV713069 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.001e-38
Identity = 72/105 (68.57%), Postives = 93/105 (88.57%), Query Frame = -2
Query:  535 SLLIPPTTLFIINXXXXXXGISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMWVRINPFVSK-DGPVLEICGLNCD 846
            +LLIPPTTL ++N      G+S+AINNGY+SWGPLFG+LFFA WVI+HLYPFLKGL+G+Q+R PTI++VWSILLASI +L+WVRI+PF++K DGP+LE CGL+C+
Sbjct:  988 TLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDCN 1092          
BLAST of CV713069 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.001e-38
Identity = 72/105 (68.57%), Postives = 93/105 (88.57%), Query Frame = -2
Query:  535 SLLIPPTTLFIINXXXXXXGISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMWVRINPFVSK-DGPVLEICGLNCD 846
            +LLIPPTTL ++N      G+S+AINNGY+SWGPLFG+LFFA WVI+HLYPFLKGL+G+Q+R PTI++VWSILLASI +L+WVRI+PF++K DGP+LE CGL+C+
Sbjct:  989 TLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDCN 1093          
BLAST of CV713069 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.805e-38
Identity = 71/105 (67.62%), Postives = 93/105 (88.57%), Query Frame = -2
Query:  535 SLLIPPTTLFIINXXXXXXGISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMWVRINPFVSK-DGPVLEICGLNCD 846
            +LLIPPTTL ++N      G+S+AINNGY+SWGPLFG+LFFA WVI+HLYPFLKGL+G+Q+R PTI++VWSILLASI +L+WVRI+PF++K +GP+LE CGL+C+
Sbjct:  988 TLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNNGPLLEECGLDCN 1092          
BLAST of CV713069 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.176e-37
Identity = 69/104 (66.35%), Postives = 89/104 (85.58%), Query Frame = -2
Query:  538 SLLIPPTTLFIINXXXXXXGISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMWVRINPFVSK-DGPVLEICGLNC 846
            +LL+PPTTL IIN      G+SDA+NNGY SWGPLFG+LFF+ WVI+HLYPFLKGL+G+Q+R PTI+++WSILLASI +L+WVRI+PF+ K  GPVL+ CG++C
Sbjct:  960 TLLVPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFIPKPKGPVLKPCGVSC 1063          
BLAST of CV713069 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.176e-37
Identity = 70/104 (67.31%), Postives = 89/104 (85.58%), Query Frame = -2
Query:  538 SLLIPPTTLFIINXXXXXXGISDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMWVRINPFVSKD-GPVLEICGLNC 846
            +LLIPPTTL I+N      G+SDAINNGY SWGPLFG+LFFA WVI+HLYPFLKGL+G+Q+R PTI+++WSILLASI +L+WVRI+PF+ K  GP+L+ CG++C
Sbjct:  946 TLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC 1049          
The following BLAST results are available for this feature:
BLAST of CV713069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
CESA9_ARATH9.036e-4887.38Probable cellulose synthase A catalytic subunit 9 ... [more]
CESA5_ARATH6.476e-4684.47Cellulose synthase A catalytic subunit 5 [UDP-form... [more]
CESA2_ARATH8.458e-4682.52Cellulose synthase A catalytic subunit 2 [UDP-form... [more]
CESA6_ARATH1.884e-4583.50Cellulose synthase A catalytic subunit 6 [UDP-form... [more]
CESA5_ORYSJ1.001e-3868.57Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA5_ORYSI1.001e-3868.57Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA3_ORYSJ1.001e-3868.57Probable cellulose synthase A catalytic subunit 3 ... [more]
CESA6_ORYSJ3.805e-3867.62Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA7_ORYSJ7.176e-3766.35Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA4_ARATH7.176e-3767.31Cellulose synthase A catalytic subunit 4 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002E14_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713069 ID=CV713069; Name=CV713069; organism=Citrus sinensis; type=EST; length=847bp
TCAAACTTCAATAAGATTTAAAGTGTTTTACAGTAGAGTGAACAATCAAG
AACATAAATTTCTGGAATACCATACATTTATGACTCCAGAATGTGAACGT
ACATACCCAAGTCTAAGCGTAATCATTGAAACAATTGAAGACATGAGATC
TAATTGTGGAATCACGTATACAAAGAACCCACAGGATATTGACAGGGGAA
TAAATATAATTCAATGCTCTCTTGCAAAATACAGAAACTCAAAATACAAA
AAGGAACCCTAACATCCATCGGAATATAATGAAAGAATTAATGAAAAACC
ATTGTAAAACAAATGACAATGTGTCAGAACCCCCCAGCCCTCTGATATCT
ACAACATTCCCAAGCTACAAGCTTTGGTTTCACAAAATTTCTTTCTTGTC
TATGACAAATCGGATCGTGCAGCACTGCATGAAGCAATTTGAGCTGGAAG
AGCAATGTCTTCTGCAACTTCACAATTATGACCATAAACTGAAACCAAAA
GACACCTAAACGCATTTTTTATTCACGTATCCTAGTCACAGTTCAACCCA
CAAATTTCTAACACGGGGCCATCTTTGGAGACAAATGGGTTTATTCTGAC
CCACATGAGGGTCAAGATTGAGGCAAGCAGAATCGACCACACCAAGATAA
TGGTAGGCATCCGATCCTGTTTTCCTAGTAACCCCTTGAGGAAGGGGTAG
AGGTGGATGATGACCCAAAGGGCAAAGAATAGCCTTCCAAAAAGTGGGCC
CCATGAATCATACCCGTTATTGATGGCATCCGAGATCCCAACTACAACCC
CGACTACATTAATGATAAACAAAGTCGTGGGAGGGATTAATAAGGAT
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