CV713063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV713063 vs. ExPASy Swiss-Prot
Match: RTL2_ORYSJ (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0271300 PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.704e-25 Identity = 62/134 (46.27%), Postives = 81/134 (60.45%), Query Frame = -1 Query: 419 FDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALEKLAQSMPVNCDVCEIFDDIDEKFEIEAAKQKLHELCGKKKWPKPSYK 820 FDL+KLW + R L EPI+T E + +QP VT+L +LCQK+GK K W+K + +V+V G V SSEQK IAKLNAAR+A KLA + DE E+ KQKL+E C ++ WPKP +K Sbjct: 186 FDLEKLWKVTRWLFEPIITAETIDEQP--VTMLHELCQKHGKMAQFKTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDATRKLAGAKKQVLTTGVGNGLGDEIGELRECKQKLNEQCSRQNWPKPIFK 317
BLAST of CV713063 vs. ExPASy Swiss-Prot
Match: DICER_ARATH (Endoribonuclease Dicer homolog OS=Arabidopsis thaliana GN=CAF PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 6.037e-17 Identity = 61/201 (30.35%), Postives = 102/201 (50.75%), Query Frame = -1 Query: 257 DLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREAL-----EKLAQSMPVNCDVCEIFDDIDEKFEIEA-------AKQKLHELCGKKKWPKPSYKIEKDEGPSHDKKFMSAVQIATTD--GVLFITGDEKSRVKDAENSAASMMLRALRES 817 D W +F+ LL+P+VT E L P V L + CQ+ + ++ K R V++DG V A + QK++A+ AAR AL +++A+S + + +D E +Q L+++C +K WP PSY+ K+ GP+H K+F V++ T+D G+ VK A++SAA ++L L ++ Sbjct: 1709 DTTAAWKVFQPLLQPMVTPETLPMHP--VRELQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKT 1907
BLAST of CV713063 vs. ExPASy Swiss-Prot
Match: DCL1_ORYSJ (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica GN=DCL1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.996e-16 Identity = 58/188 (30.85%), Postives = 99/188 (52.66%), Query Frame = -1 Query: 266 FDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKNGKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALEKLAQSMPVNCDVCEIFDDIDEKFEIEA-AKQKLHELCGKKKWPKPSYKIEKDEGPSHDKKFMSAVQIATTD--GVLFITGDEKSRVKDAENSAASMMLRAL 820 +D +W +F+ LL P+VT E L P V L + CQ+ + ++ K R V+VDG + A + QK++A+ AAR AL L + E D ++K + +Q L+++C +++WP P Y+ + GP+H K+F+ +V++ T+D G+ VK A++SAA ++L L Sbjct: 1687 YDTSVVWKVFQPLLHPMVTPETLPMHP--VRELQERCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALVVLKEKETATKKEDE--RDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELL 1870 The following BLAST results are available for this feature:
BLAST of CV713063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV713063 ID=CV713063; Name=CV713063; organism=Citrus sinensis; type=EST; length=820bpback to top |