CV713060

Overview
NameCV713060
Unique NameCV713060
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713060 vs. ExPASy Swiss-Prot
Match: P2R3C_XENTR (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Xenopus tropicalis GN=ppp2r3c PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.642e-42
Identity = 86/187 (45.99%), Postives = 119/187 (63.64%), Query Frame = -2
Query:  190 EEEVTDTEQAENWFSLTSAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMDFDNFLDFVLALENKDTPEGLTYLFRCLDLQERGYLTTADIHSLFRDVHQKWIEGGNYELCIEDVRDEIWDMVKPADPLRITLADLLSCKQGGTVASMLIDVRGFWAHDNR 750
            +E+++   Q  NWFS  SA RV   ++ LDKD NG LSK+EL  Y  GTLT +F++RVF E +           EMD+  +LDFVLALEN+  P  L Y+F+ LD++ +G L    ++  FR + ++    G   +  +DV+DEI+DMVKP DPLRITL DL+   QG TV S+LID+ GFW ++NR
Sbjct:  252 DEDLSKESQESNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTGTLTCVFLDRVFQECLTYDG-------EMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGSLNVFSLNFFFRAIQEQMKIHGQEAVSFQDVKDEIFDMVKPKDPLRITLQDLIQSSQGDTVCSILIDLNGFWTYENR 431          
BLAST of CV713060 vs. ExPASy Swiss-Prot
Match: P2R3C_DANRE (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Danio rerio GN=ppp2r3c PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.060e-41
Identity = 84/187 (44.92%), Postives = 120/187 (64.17%), Query Frame = -2
Query:  190 EEEVTDTEQAENWFSLTSAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMDFDNFLDFVLALENKDTPEGLTYLFRCLDLQERGYLTTADIHSLFRDVHQKWIEGGNYELCIEDVRDEIWDMVKPADPLRITLADLLSCKQGGTVASMLIDVRGFWAHDNR 750
            +EE++   Q  NWFS  SA RV   ++ LDKD NG LSK+EL  Y  GTLT +F++RV+   +           EMD+  +LDFVLALEN+  P  L Y+F+ LD++ +GYL    ++  FR + ++    G   +  +DV+DEI+DMVKP DP +ITL DL++  QG TV+S+LID+ GFW ++NR
Sbjct:  260 DEELSKESQESNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTGTLTSVFLDRVYQACLTYDG-------EMDYKTYLDFVLALENRKEPAALQYIFKLLDMENKGYLNVFALNYFFRAIQEQMKIHGQEPVSFQDVKDEIFDMVKPKDPYKITLQDLVNSGQGDTVSSILIDLNGFWTYENR 439          
BLAST of CV713060 vs. ExPASy Swiss-Prot
Match: P2R3C_RAT (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Rattus norvegicus GN=Ppp2r3c PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.807e-41
Identity = 83/187 (44.39%), Postives = 119/187 (63.64%), Query Frame = -2
Query:  190 EEEVTDTEQAENWFSLTSAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMDFDNFLDFVLALENKDTPEGLTYLFRCLDLQERGYLTTADIHSLFRDVHQKWIEGGNYELCIEDVRDEIWDMVKPADPLRITLADLLSCKQGGTVASMLIDVRGFWAHDNR 750
            +EE++   Q  NWFS  SA RV   ++ LDKD NG LSK+EL  Y   T+T +F++RVF E +           EMD+  +LDFVLALEN+  P  L Y+F+ LD++ +GYL    ++  FR + +     G   +  +DV+DEI+DMVKP DPL+I+L DL++  QG TV ++LID+ GFW ++NR
Sbjct:  257 DEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTATMTNVFLDRVFQECLTYDG-------EMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTTILIDLNGFWTYENR 436          
BLAST of CV713060 vs. ExPASy Swiss-Prot
Match: P2R3C_MOUSE (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Mus musculus GN=Ppp2r3c PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.807e-41
Identity = 83/187 (44.39%), Postives = 119/187 (63.64%), Query Frame = -2
Query:  190 EEEVTDTEQAENWFSLTSAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMDFDNFLDFVLALENKDTPEGLTYLFRCLDLQERGYLTTADIHSLFRDVHQKWIEGGNYELCIEDVRDEIWDMVKPADPLRITLADLLSCKQGGTVASMLIDVRGFWAHDNR 750
            +EE++   Q  NWFS  SA RV   ++ LDKD NG LSK+EL  Y   T+T +F++RVF E +           EMD+  +LDFVLALEN+  P  L Y+F+ LD++ +GYL    ++  FR + +     G   +  +DV+DEI+DMVKP DPL+I+L DL++  QG TV ++LID+ GFW ++NR
Sbjct:  257 DEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTATMTNVFLDRVFQECLTYDG-------EMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTTILIDLNGFWTYENR 436          
BLAST of CV713060 vs. ExPASy Swiss-Prot
Match: P2R3C_HUMAN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Homo sapiens GN=PPP2R3C PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.807e-41
Identity = 83/187 (44.39%), Postives = 119/187 (63.64%), Query Frame = -2
Query:  190 EEEVTDTEQAENWFSLTSAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMDFDNFLDFVLALENKDTPEGLTYLFRCLDLQERGYLTTADIHSLFRDVHQKWIEGGNYELCIEDVRDEIWDMVKPADPLRITLADLLSCKQGGTVASMLIDVRGFWAHDNR 750
            +EE++   Q  NWFS  SA RV   ++ LDKD NG LSK+EL  Y   T+T +F++RVF E +           EMD+  +LDFVLALEN+  P  L Y+F+ LD++ +GYL    ++  FR + +     G   +  +DV+DEI+DMVKP DPL+I+L DL++  QG TV ++LID+ GFW ++NR
Sbjct:  257 DEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTATMTNVFLDRVFQECLTYDG-------EMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTTILIDLNGFWTYENR 436          
BLAST of CV713060 vs. ExPASy Swiss-Prot
Match: P2R3C_BOVIN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Bos taurus GN=PPP2R3C PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.807e-41
Identity = 83/187 (44.39%), Postives = 119/187 (63.64%), Query Frame = -2
Query:  190 EEEVTDTEQAENWFSLTSAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMDFDNFLDFVLALENKDTPEGLTYLFRCLDLQERGYLTTADIHSLFRDVHQKWIEGGNYELCIEDVRDEIWDMVKPADPLRITLADLLSCKQGGTVASMLIDVRGFWAHDNR 750
            +EE++   Q  NWFS  SA RV   ++ LDKD NG LSK+EL  Y   T+T +F++RVF E +           EMD+  +LDFVLALEN+  P  L Y+F+ LD++ +GYL    ++  FR + +     G   +  +DV+DEI+DMVKP DPL+I+L DL++  QG TV ++LID+ GFW ++NR
Sbjct:  257 DEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTATMTNVFLDRVFQECLTYDG-------EMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTTILIDLNGFWTYENR 436          
BLAST of CV713060 vs. ExPASy Swiss-Prot
Match: P2R3A_MOUSE (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha OS=Mus musculus GN=Ppp2r3a PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.473e-15
Identity = 50/182 (27.47%), Postives = 86/182 (47.25%), Query Frame = -2
Query:  190 DTEQAENWFSLTSAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMDFDNFLDFVLALENKDTPEGLTYLFRCLDLQERGYLTTADIHSLFRDVHQKWIEGGNYELCIEDVRDEIWDMVKPADPLRITLADLLSCKQGGTVASMLIDVRGFWAHDNR 735
            D  +  ++FS      +   F  LD D + T+ + +L  + DG ++   I+R+F   V R +       ++ + +F+ F+L+ E+K TP    Y FRC+DL   G L+  ++   + +  Q+    G   L   D+  ++ D+V P  P RITL DL  C   G       +V  + A + R
Sbjct:  246 DINRMTSFFSYEHFYVIYCKFWELDLDRDLTIDRSDLARHGDGAISSRMIDRIFSGAVTRARLPR-KVGKLSYADFVWFLLSEEDKTTPTSTEYWFRCMDLDGDGALSMFELEFFYEEQAQRMAARGVEPLPFHDLARQVLDLVAPRCPGRITLRDLKQCGLAGEFFDAFFNVDKYLAREQR 426          
BLAST of CV713060 vs. ExPASy Swiss-Prot
Match: P2R3A_HUMAN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha OS=Homo sapiens GN=PPP2R3A PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.104e-14
Identity = 52/186 (27.96%), Postives = 89/186 (47.85%), Query Frame = -2
Query:  190 EEVTDTEQAENWFSLTSAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMDFDNFLDFVLALENKDTPEGLTYLFRCLDLQERGYLTTADIHSLFRDVHQKWIEGGNYELCIEDVRDEIWDMVKPADPLRITLADLLSCKQGGTVASMLIDVRGFWAHDNR 747
            EE  D  Q  ++FS      +   F  LD D +  +S+ +L  Y D   +   IER+F   V RGK+     R M + +F+ F+++ E+K  P  + Y FRC+D+   G L+  ++   + +  ++    G   L   D+  ++ D+VKPA   +ITL DL  C+          ++  +  H+ R
Sbjct:  883 EEEEDINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTRGKTIQKEGR-MSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQR 1067          
BLAST of CV713060 vs. ExPASy Swiss-Prot
Match: P2R3B_HUMAN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta OS=Homo sapiens GN=PPP2R3B PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12
Identity = 47/186 (25.27%), Postives = 85/186 (45.70%), Query Frame = -2
Query:  190 EEVTDTEQAENWFSLTSAQRVCDMFIALDKDANGTLSKQELREYADGTLTEIFIERVFDEHVRRGKSGGGNAREMDFDNFLDFVLALENKDTPEGLTYLFRCLDLQERGYLTTADIHSLFRDVHQKWIEGGNYELCIEDVRDEIWDMVKPADPLRITLADLLSCKQGGTVASMLIDVRGFWAHDNR 747
            EE  D  Q   +FS      +   F  LD D +  +   +L  + D  L+   I+R+F   V RG+      + + + +F+ F+++ E+K TP  + Y FRC+DL   G L+  ++   + +  ++        L  +D   ++ D+VKP    +ITL DL  CK          ++  +  H+ +
Sbjct:  299 EEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEGK-ISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQK 483          
The following BLAST results are available for this feature:
BLAST of CV713060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
P2R3C_XENTR3.642e-4245.99Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_DANRE1.060e-4144.92Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_RAT1.807e-4144.39Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_MOUSE1.807e-4144.39Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_HUMAN1.807e-4144.39Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_BOVIN1.807e-4144.39Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3A_MOUSE6.473e-1527.47Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3A_HUMAN1.104e-1427.96Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3B_HUMAN1.033e-1225.27Serine/threonine-protein phosphatase 2A regulatory... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0002E07_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713060 ID=CV713060; Name=CV713060; organism=Citrus sinensis; type=EST; length=757bp
TCCCCCGGGGCTGCAGGTTTTTTAACATACACANTTCGAGTACTAGATAT
TCATTTAGAGATACATAAACACAAAACAAAATACATCAGCTTCAGACAGC
AGTCTTTTGTTAGTACAAACACATCCTTTAAATCATACACAAGCCAGTCA
TTCTTCTTCAGGTTCTTCATCTTCCTGGAGAAGATTTTCTCTATTGTCAT
GAGCCCAGAAGCCACGAACGTCTATAAGCATGCTAGCTACAGTCCCACCC
TGTTTACAAGAAAGCAGATCGGCCAAAGTAATCCTTAGTGGGTCAGCTGG
TTTGACCATATCCCAGATTTCATCCCTCACATCCTCAATACATAGTTCAT
AGTTCCCACCCTCAATCCATTTCTGATGCACGTCCCTGAAAAGAGAGTGA
ATATCAGCTGTAGTGAGATATCCCCGTTCCTGAAGATCAAGACAGCGAAA
TAAATATGTTAACCCTTCTGGAGTATCTTTATTTTCTAAGGCCAGAACAA
AGTCAAGGAAATTGTCGAAGTCCATCTCCCTAGCATTTCCTCCTCCACTT
TTGCCACGTCGGACATGCTCATCAAATACCCTCTCAATGAAAATTTCTGT
CAGTGTCCCATCTGCGTATTCTCGAAGCTCCTGCTTGCTCAACGTCCCAT
TTGCATCCTTATCAAGGGCAATAAACATGTCGCATACGCGTTGTGCAGAT
GTCAAAGAAAACCAATTTTCAGCTTGTTCAGTGTCAGTAACTTCTTCCTC
ACTTTCC
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