CV712993

Overview
NameCV712993
Unique NameCV712993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10255 contig Csv1_Contig10255:58..774. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CV712993 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.058e-24
Identity = 59/117 (50.43%), Postives = 74/117 (63.25%), Query Frame = 2 
Query:  365 LDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMXXXXXXXXXXXXXXXXXXXXXXXQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGT 715
            ++LD  FEQK ++AK+V EELEK M  YGY I   L+VDI PD+ V+RAM                       Q+KRAE EAE+KYL G+G+ARQRQAI DGLR+++L FS  V GT
Sbjct:    1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGT 117
The following BLAST results are available for this feature:
BLAST of CV712993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLZ12_LUPPO1.058e-2450.43Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0002C19_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002C19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712993 ID=CV712993; Name=CV712993; organism=Citrus sinensis; type=EST; length=717bp
TTTAGTTAAAAGCTTTAGGTATAATCAGAAAATGGGACAAGCTTTAGGTT
GTATTCAGGTGGATCAGTCAACTGTGGCCATCAGGGAAACCTTTGGGAAG
TTTGATGAGGTGCTTGAACCTGGCTGTCACTGTTTGCCTTGGTGTTTGGG
GAGCCAAGTAGCAGGTCAACTCTCATTACGTGTTCAGCAGTTGGATGTTC
GATGTGAAACAAAAACCAAGGACAATGTGTTTGTTAATGTGGTTGCTTCC
GTTCAATACCGAGCCTTGGCAGAGAAGGCTTCAGATGCCTTTTATAAGCT
CAGCAATACTAGATCGCAGATCCAAGCGTATGTCTTTGATGTTATTAGGG
CAAGTGTACCAAAGCTGGACCTGGATGCAACCTTTGAGCAGAAGAACGAC
ATAGCCAAAGCTGTGGAAGAGGAACTCGAAAAGGCCATGTCTCATTATGG
TTATGAGATAGTTCAGACTCTCATCGTAGATATTGAACCAGATGAACATG
TGAAGAGAGCAATGAATGAGATCAATGCAGCGGCCAGATTGAGGCTGGCT
GCAAATGAGAAAGCGGAAGCAGAGAANATATTGCAGATCAAGCGTGCTGA
AGGAGAAGCAGAATCAAAGTATTTGGCAGGCCTTGGTATTGCACGTCAGC
GTCAGGCCATTGTTGATGGCCTGAGGGATAGCGTGCTAGCCTTCTCTGAG
AATGTACCTGGAACATC
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