CV712982

Overview
NameCV712982
Unique NameCV712982
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6561 contig Csv1_Contig6561:565..1377. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712982 vs. ExPASy Swiss-Prot
Match: Y2734_ARATH (Uncharacterized protein At2g17340 OS=Arabidopsis thaliana GN=At2g17340 PE=1 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 5.441e-79
Identity = 149/181 (82.32%), Postives = 160/181 (88.40%), Query Frame = -3
Query:  269 CQNLVPRPWVIDDLETFXXXXXXXXXXXXVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEVSS 811
            CQNLVPRPWVIDDLE F            VIFVDNSGADIILGILPFARELLRRG QV+LAAN+LPSIND+T  EL EI+S+LKDE GQL+GVDTSKLLIANSGNDLPVIDL+ VSQELAYL+SDADLVI+EGMGRGIETNLYAQFKCDSLKIGMVKH EVA+FLGGRLYDCVFK+NEV S
Sbjct:  187 CQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANELPSINDITCTELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEVQS 367          
BLAST of CV712982 vs. ExPASy Swiss-Prot
Match: PANK2_ARATH (Pantothenate kinase 2 OS=Arabidopsis thaliana GN=At4g32180 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.298e-35
Identity = 88/209 (42.11%), Postives = 121/209 (57.89%), Query Frame = -3
Query:  272 QNLVPRPWVIDDLETFXXXXXXXXXXXXV------IFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMS---------KLKDEKGQLMGVD--------------TSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQ-FLGGRLYDCVFKYNEVS 808
            +N + RPW +DD + F                   +FVDNSGAD+ILG+LP ARE LRRGT+V+L AN LP++NDVT  EL +I++         +   E G L+ VD              ++ L++  +G   P IDL  VS ELA  A DADLV+LEGMGR + TN  AQF+C++LK+ MVK+  +A+  + G +YDCV +Y   S
Sbjct:  662 RNKMQRPWRVDDFDAFKERMLGSGGKQPHRHKRALLFVDNSGADVILGMLPLAREFLRRGTEVVLVANSLPALNDVTAMELPDIVAGAAKHCDILRRAAEMGGLL-VDAMVNPGDGSKKDSTSAPLMVVENGCGSPCIDLRQVSSELAAAAKDADLVVLEGMGRALHTNFNAQFQCEALKLAMVKNQRLAEKLIKGNIYDCVCRYEPPS 869          
BLAST of CV712982 vs. ExPASy Swiss-Prot
Match: PANK4_HUMAN (Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.715e-32
Identity = 71/178 (39.89%), Postives = 110/178 (61.80%), Query Frame = -3
Query:  284 QNLVPRPWVIDDLETFXXXXXXXXXXXXVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQL-MGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKY 808
            + L  RPW++D    +            +IF DNSG DIILG+ PF RELL RGT+VILA N  P++NDVT+ E + +  ++      +   +   +LL+  +G+  P +DL+ + + LA L  +  ADLV++EGMGR + TN +A  +C+SLK+ ++K+  +A+ LGGRL+  +FKY
Sbjct:  591 RKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNSGIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALQEERLLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERLGGRLFSVIFKY 768          
BLAST of CV712982 vs. ExPASy Swiss-Prot
Match: PANK4_PONAB (Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.926e-32
Identity = 71/178 (39.89%), Postives = 110/178 (61.80%), Query Frame = -3
Query:  284 QNLVPRPWVIDDLETFXXXXXXXXXXXXVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQL-MGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKY 808
            + L  RPW++D    +            +IF DNSG DIILG+ PF RELL RGT+VILA N  P++NDVT+ E + +  ++      +   +   +LL+  +G+  P +DL+ + + LA L  +  ADLV++EGMGR + TN +A  +C+SLK+ ++K+  +A+ LGGRL+  +FKY
Sbjct:  591 RKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNSGIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALREERLLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERLGGRLFSVIFKY 768          
BLAST of CV712982 vs. ExPASy Swiss-Prot
Match: PANK4_MACFA (Pantothenate kinase 4 OS=Macaca fascicularis GN=PANK4 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.452e-31
Identity = 71/178 (39.89%), Postives = 109/178 (61.24%), Query Frame = -3
Query:  284 QNLVPRPWVIDDLETFXXXXXXXXXXXXVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQL-MGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKY 808
            + L  RPW++D    +            +IF DNSG DIILG+ PF RELL RGT+VILA N  P++NDVT+ E + +  ++      +   +   +LL+  +G+  P +DL+ + + LA L  +  ADLV++EGMGR + TN +A   C+SLK+ ++K+  +A+ LGGRL+  +FKY
Sbjct:  591 RKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNSGIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTHGESLIVAERIAGMDPVVHSALREERLLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALCCESLKLAVIKNAWLAERLGGRLFSVIFKY 768          
BLAST of CV712982 vs. ExPASy Swiss-Prot
Match: PANK4_RAT (Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank4 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.477e-31
Identity = 71/178 (39.89%), Postives = 109/178 (61.24%), Query Frame = -3
Query:  284 QNLVPRPWVIDDLETFXXXXXXXXXXXXVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQL-MGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKY 808
            + L  RPW++D    +            +IF DNSG DIILG+ PF RELL RG +VILA N  P++NDVTY E + +  ++      +   +   +LL+  +G+  P +DL+ + + LA L  +  ADLV++EGMGR + TN +A  +C+SLK+ +VK+  +A+ LGG+L+  +FKY
Sbjct:  591 RKLQERPWLVDSYTKWLQRLKGPPHKCALIFADNSGIDIILGVFPFVRELLCRGIEVILACNSGPALNDVTYSESLIVAERIAAMDPIICTALREDRLLLVQTGSSPPCLDLSRLDKGLAVLVRERGADLVVIEGMGRAVHTNYHALLRCESLKLAVVKNAWLAERLGGQLFSVIFKY 768          
BLAST of CV712982 vs. ExPASy Swiss-Prot
Match: PANK4_MOUSE (Pantothenate kinase 4 OS=Mus musculus GN=Pank4 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.555e-25
Identity = 73/225 (32.44%), Postives = 110/225 (48.89%), Query Frame = -3
Query:  284 QNLVPRPWVIDDLETFXXXXXXXXXXXXVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQL-MGVDTSKLLIANSGNDLPVIDL-----------------------------------------------TAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKY 808
            + L  RPW++D    +            +IF DNSG DIILG+ PF RELL RGT+VILA N  P++NDVTY E + +  ++      +   +   +LL+  +G+  P +DL                                               + + + LA L  +  ADLV++EGMGR I TN +A  +C+SLK+ +VK+  +A+ LGG+L+  +FKY
Sbjct:  591 RKLQERPWLVDSYTKWLQRLKGPPHKCALIFADNSGIDIILGVFPFVRELLFRGTEVILACNSGPALNDVTYSESLIVAERIAAMDPIICTALREDRLLLVQTGSSSPCLDLSLCTSRTTTCMVLPFAMWVLWTKLKSLVEKCLSPLSILLACSVLSAKSRLDKGLAVLVRERGADLVVIEGMGRAIHTNYHALLRCESLKLAVVKNAWLAERLGGQLFSVIFKY 815          
The following BLAST results are available for this feature:
BLAST of CV712982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
Y2734_ARATH5.441e-7982.32Uncharacterized protein At2g17340 OS=Arabidopsis t... [more]
PANK2_ARATH6.298e-3542.11Pantothenate kinase 2 OS=Arabidopsis thaliana GN=A... [more]
PANK4_HUMAN1.715e-3239.89Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=... [more]
PANK4_PONAB2.926e-3239.89Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=... [more]
PANK4_MACFA1.452e-3139.89Pantothenate kinase 4 OS=Macaca fascicularis GN=PA... [more]
PANK4_RAT2.477e-3139.89Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank... [more]
PANK4_MOUSE1.555e-2532.44Pantothenate kinase 4 OS=Mus musculus GN=Pank4 PE=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0002C14_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002C14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712982 ID=CV712982; Name=CV712982; organism=Citrus sinensis; type=EST; length=813bp
AATTGATAATTAACAGTAATTTATGAAGCCGAACTTCATAAACAGGAAAA
TACAATCCACCCGACAGGAAAATACAATCCACCCGACATCACAAGTATGG
AAAAACCATTCGGGTGCAAGTCTTCGGATTTTCAGTTTCCATTATTGCCT
ATAAGGGTGAAATTTTGACATTCATATGCTTAAGTTTTTATGCTCTAATA
TTCTATGTGCACTGAATGATCGACACAGGACGAATAGGGTTAGGGGGACA
GGCAAAGAATCAACTTTAACTTGAAACTTCATTGTATTTAAAGACACAAT
CATAGAGCCGTCCTCCTAGAAACTGGGCAACCTCGGGATGTTTGACCATC
CCAATCTTCAAGGAATCACATTTGAATTGAGCGTACAGATTTGTTTCAAT
TCCACGACCCATTCCTTCTAAGATAACTAGGTCTGCATCACTCGCTAGGT
AGGCAAGCTCTTGTGATACTGCTGTAAGATCAATAACTGGCAAATCATTG
CCAGAATTGGCAATCAAAAGCTTTGAAGTATCAACGCCCATGAGCTGCCC
CTTTTCATCCTTCAACTTTGACATGATTTCAATCAGTTCAGGGTAGGTTA
CATCATTGATTGAAGGTAAGTCATTAGCAGCCAAAATAACCTGAGTTCCA
CGTCGGAGTAATTCCCTTGCAAACGGTAGGATACCTAAAATTATATCCGC
TCCAGAATTATCAACAAAAATGACAGCCTTCTTCCAAGCTTTCTTGCTCC
ATTTCACTTTAAAGGTCTCCAAGTCATCGATAACCCAAGGCCGAGGCACA
AGATTTTGACAAC
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