CV712973

Overview
NameCV712973
Unique NameCV712973
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8629 contig Csv1_Contig8629:234..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712973 vs. ExPASy Swiss-Prot
Match: ANTR2_ARATH (Probable anion transporter 2, chloroplastic OS=Arabidopsis thaliana GN=ANTR2 PE=2 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 2.593e-88
Identity = 157/168 (93.45%), Postives = 165/168 (98.21%), Query Frame = 1
Query:    1 PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 504
            PTYYNQVLKFNLTESGL CVLPWLTMAVFAN+GGWIADTLVS+GLSIT VRKIMQSIGFLGPAFFL+QLSHV+TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAV LY+IGTLVWNLFATGE++L+
Sbjct:  374 PTYYNQVLKFNLTESGLLCVLPWLTMAVFANIGGWIADTLVSRGLSITNVRKIMQSIGFLGPAFFLSQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVALYLIGTLVWNLFATGEKILD 541          
BLAST of CV712973 vs. ExPASy Swiss-Prot
Match: PHT41_ORYSJ (Probable anion transporter 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;1 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 5.406e-86
Identity = 150/168 (89.29%), Postives = 163/168 (97.02%), Query Frame = 1
Query:    1 PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 504
            PTYYNQVLKFNLTESGLFCVLPWLTMAV AN GGWIADTLVS+GLS+T VRKIMQSIGFLGPAFFLTQLSH+ +PAMAVLCMACSQG+DAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ GSWDDVFKV+VVLY++GTLVWNLF+TGE++++
Sbjct:  362 PTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADTLVSRGLSVTTVRKIMQSIGFLGPAFFLTQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVVLYLVGTLVWNLFSTGEKIID 529          
BLAST of CV712973 vs. ExPASy Swiss-Prot
Match: PHT44_ORYSJ (Probable anion transporter 4, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;4 PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 3.874e-84
Identity = 150/168 (89.29%), Postives = 161/168 (95.83%), Query Frame = 1
Query:    1 PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 504
            PTYYNQVLKFNLTESGL CVLPWLTMA+FAN+GGWIADTLV +G+SIT VRKIMQSIGFLGPA FLT LS VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ+GSWD VF+VAVVLYI+GT+VWN+F+TGE+VLE
Sbjct:  424 PTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVGRGVSITNVRKIMQSIGFLGPALFLTLLSKVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQKGSWDSVFQVAVVLYIVGTVVWNVFSTGEKVLE 591          
BLAST of CV712973 vs. ExPASy Swiss-Prot
Match: ANTR1_ARATH (Sodium-dependent phosphate transport protein 1, chloroplastic OS=Arabidopsis thaliana GN=ANTR1 PE=1 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.476e-75
Identity = 130/168 (77.38%), Postives = 152/168 (90.48%), Query Frame = 1
Query:    1 PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 504
            PTYY+QVLKFNL ESGL  V PW+TMA+ AN GGWIADTLVS+G S+T VRKIMQ+IGFLGPAFFLTQL H+ +P MAVLCMACSQG+DAFSQSGLYSNHQDI PRY+GVLLGLSNTAGVLAGV GTAATG+ILQ GSWDDVF ++V LY++GT++WNLF+TGE++++
Sbjct:  345 PTYYHQVLKFNLMESGLLSVFPWMTMAISANAGGWIADTLVSRGFSVTNVRKIMQTIGFLGPAFFLTQLKHIDSPTMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVLGTAATGHILQHGSWDDVFTISVGLYLVGTVIWNLFSTGEKIID 512          
BLAST of CV712973 vs. ExPASy Swiss-Prot
Match: ANTR3_ARATH (Probable anion transporter 3, chloroplastic OS=Arabidopsis thaliana GN=ANTR3 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.397e-33
Identity = 75/167 (44.91%), Postives = 98/167 (58.68%), Query Frame = 1
Query:    1 PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTLVWNLFATGERV 498
            P Y+  V   NL ++  F  LPW TMA+     G  +D L+  G S+T+VRKIMQSIGF+GP   L  L+  ++P+ A + M  +    +FSQ+G   N QDI P+YAG L G+SN AG LA +  T  TGY +Q  GS+     V   LY   T+ W LFATGERV
Sbjct:  345 PVYFQTVFNVNLKQAAWFSALPWATMAISGYYAGAASDFLIRTGHSVTSVRKIMQSIGFMGPGLSLLCLNFAKSPSCAAVFMTIALSLSSFSQAGFLLNMQDIAPQYAGFLHGISNCAGTLAAIVSTIGTGYFVQWLGSFQAFLTVTAFLYFATTVFWLLFATGERV 511          
BLAST of CV712973 vs. ExPASy Swiss-Prot
Match: PHT43_ORYSJ (Probable anion transporter 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;3 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.066e-33
Identity = 71/167 (42.51%), Postives = 99/167 (59.28%), Query Frame = 1
Query:    1 PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIGTLVWNLFATGERV 498
            P Y+  +   NL E+  F  LPW+ MAV   + G ++D L+  G SIT  RKIMQ+IGF+GP   L  L+  ++P +A   +  + G  +F  SG   N Q+I P+YAGVL G+SNTAG  A + GT   G+ + R GS+     +  +LY   TL W++FATGERV
Sbjct:  347 PVYFKTIYHVNLREAAWFSALPWVMMAVLGYVAGVVSDRLIQNGTSITLTRKIMQTIGFVGPGVALLGLNAAKSPVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYAGVLHGMSNTAGTFAAILGTVGAGFFVDRMGSFRGFLILTSLLYFSSTLFWDIFATGERV 513          
BLAST of CV712973 vs. ExPASy Swiss-Prot
Match: PHT42_ORYSJ (Probable anion transporter 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;2 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.446e-30
Identity = 67/169 (39.64%), Postives = 97/169 (57.40%), Query Frame = 1
Query:    1 PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 504
            P Y+  V   NL ++  F  +PW  MA+   + G  AD L+  G S+  VRKIMQSIGF+GP   L  L   +TP++A + M  +    +FSQ+G + N QDI P+YAG L GL+N  G +A +  T  TGY +Q  GS+     +  VLY   T+ +N +ATG+ + +
Sbjct:  367 PVYFKTVYNVNLKQAAWFSAIPWAVMALSGYVAGASADFLIKSGFSVALVRKIMQSIGFIGPGVSLLCLRFAQTPSVAAVLMTIALSLSSFSQAGYFCNVQDIAPKYAGSLHGLTNGIGTVAAIVSTIGTGYFVQWLGSFQAFLTLTAVLYFSATVFYNTYATGDLIFD 535          
BLAST of CV712973 vs. ExPASy Swiss-Prot
Match: PHT46_ORYSJ (Probable anion transporter 6 OS=Oryza sativa subsp. japonica GN=PHT4;6 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.176e-30
Identity = 69/180 (38.33%), Postives = 108/180 (60.00%), Query Frame = 1
Query:    1 PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVS-KGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-----------SWDDVFKVAVVLYIIGTLVWNLFATGERVLE 504
            PTY+   L+ +L + G   +LP+L M +F+N+GG +AD L++ K LS+T  RK++ ++GF+  A  L  L   RTP+ A+ C + S G  A  ++G   NH D+ P++AG+++G+SNTAG LAG+ G   TG IL+             SW  VF V   L I  + ++ +F+TGE++ E
Sbjct:  249 PTYFKLGLQLSLQDMGFSKMLPYLNMFLFSNIGGVLADHLITRKILSVTKTRKLLNTVGFVVSAIALMALPLFRTPSGAIFCSSVSLGFLALGRAGFAVNHMDVAPKFAGIVMGISNTAGTLAGIVGVGLTGRILEAAKASNMDLTSSESWRTVFFVPGYLCIFSSFIFLIFSTGEKIFE 428          
BLAST of CV712973 vs. ExPASy Swiss-Prot
Match: ANTR4_ARATH (Probable anion transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ANTR4 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.176e-30
Identity = 66/167 (39.52%), Postives = 98/167 (58.68%), Query Frame = 1
Query:    1 PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTLVWNLFATGERV 498
            P Y+N V   NL ++  F  +PW  MA    + G+ +D L+ +G SIT  RKIMQSIGF+GP   L  L+  + P +A   ++ + G  +FS  G   N Q+I P Y+GVL G+  TAG LA + GT   G+ ++  GS+     +  +LY++  L +N++ATGERV
Sbjct:  361 PIYFNSVYHVNLKQAAWFSAVPWSMMAFTGYIAGFWSDLLIRRGTSITLTRKIMQSIGFIGPGIALIGLTTAKQPLVASAWLSLAVGLKSFSHLGFLINLQEIAPEYSGVLHGMCLTAGTLAAIVGTVGAGFFVELLGSFQGFILLTAILYLLSALFYNIYATGERV 527          
BLAST of CV712973 vs. ExPASy Swiss-Prot
Match: PHT47_ORYSJ (Probable anion transporter 7 OS=Oryza sativa subsp. japonica GN=PHT4;7 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.088e-29
Identity = 69/180 (38.33%), Postives = 108/180 (60.00%), Query Frame = 1
Query:    1 PTYYNQVLKFNLTESGLFCVLPWLTMAVFANMGGWIADTLVSKG-LSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-----------SWDDVFKVAVVLYIIGTLVWNLFATGERVLE 504
            PTY+   L+ +L + G   +LP+  M +F+N+GG +AD L+++  LSIT  RK++ +IGF+  A  L  L   RTP+  VLC + S G  A  ++G   NH D+ P++AG+++G+SNTAG LAG+ G   TG IL+             +W  VF V   L I  ++++ +F+TGE++ E
Sbjct:  260 PTYFELGLQLSLQDMGSSKMLPYFNMFIFSNIGGVVADHLITRRILSITKTRKLLNTIGFVVSAVALMALPLFRTPSGTVLCSSISLGFLALGRAGFAVNHMDVAPKFAGIVMGVSNTAGTLAGIVGVGLTGSILEGAKASNMDLTNSETWKTVFFVPGYLCIFSSIIFLIFSTGEKIFE 439          
The following BLAST results are available for this feature:
BLAST of CV712973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
ANTR2_ARATH2.593e-8893.45Probable anion transporter 2, chloroplastic OS=Ara... [more]
PHT41_ORYSJ5.406e-8689.29Probable anion transporter 1, chloroplastic OS=Ory... [more]
PHT44_ORYSJ3.874e-8489.29Probable anion transporter 4, chloroplastic OS=Ory... [more]
ANTR1_ARATH1.476e-7577.38Sodium-dependent phosphate transport protein 1, ch... [more]
ANTR3_ARATH1.397e-3344.91Probable anion transporter 3, chloroplastic OS=Ara... [more]
PHT43_ORYSJ4.066e-3342.51Probable anion transporter 3, chloroplastic OS=Ory... [more]
PHT42_ORYSJ1.446e-3039.64Probable anion transporter 2, chloroplastic OS=Ory... [more]
PHT46_ORYSJ7.176e-3038.33Probable anion transporter 6 OS=Oryza sativa subsp... [more]
ANTR4_ARATH7.176e-3039.52Probable anion transporter 4, chloroplastic OS=Ara... [more]
PHT47_ORYSJ2.088e-2938.33Probable anion transporter 7 OS=Oryza sativa subsp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002C09_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712973 ID=CV712973; Name=CV712973; organism=Citrus sinensis; type=EST; length=658bp
CCTACATACTATAATCAGGTCTTGAAGTTCAACCTCACTGAATCTGGGCT
CTTCTGTGTCTTGCCTTGGTTGACCATGGCTGTTTTTGCAAATATGGGAG
GCTGGATTGCAGATACACTTGTTAGCAAAGGACTTTCCATAACAGCAGTT
CGTAAGATCATGCAATCCATTGGGTTTTTGGGACCAGCCTTCTTTCTCAC
ACAGCTGAGCCATGTCAGGACTCCTGCAATGGCAGTGCTATGCATGGCAT
GCAGTCAGGGATCTGATGCATTCTCACAATCTGGTCTTTATTCCAATCAT
CAAGATATTGGGCCGCGCTATGCTGGAGTTCTCTTAGGACTATCAAACAC
AGCAGGAGTGCTTGCTGGTGTTTTCGGTACAGCTGCAACCGGTTACATAC
TCCAACGAGGTTCTTGGGATGATGTATTCAAGGTAGCTGTTGTCTTATAC
ATCATTGGCACCTTAGTCTGGAACTTATTTGCAACGGGAGAGAGAGTTCT
TGAGTAGACGAAGTGCAAGAATGGGAGGAAGATGCTGTAATGAGTAAAGA
AGAAGAGACCAAGTCATCAAGAAATTGAAGGAAAATCAAAAGGCGATAAC
AATGCCATCCATGCTGGGGCATGAAACCCTGCTAAGCAAGGGTAAATTAA
GATGCTAC
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