CV712972

Overview
NameCV712972
Unique NameCV712972
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8629 contig Csv1_Contig8629:19..836. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: ANTR2_ARATH (Probable anion transporter 2, chloroplastic OS=Arabidopsis thaliana GN=ANTR2 PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.149e-76
Identity = 139/149 (93.29%), Postives = 147/149 (98.66%), Query Frame = -3
Query:  370 VLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 816
            VLPWLTMAVFAN+GGWIADTLVS+GLSIT VRKIMQSIGFLGPAFFL+QLSHV+TPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAV LY+IGTLVWNLFATGE++L+
Sbjct:  393 VLPWLTMAVFANIGGWIADTLVSRGLSITNVRKIMQSIGFLGPAFFLSQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVALYLIGTLVWNLFATGEKILD 541          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: PHT41_ORYSJ (Probable anion transporter 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;1 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.189e-73
Identity = 131/149 (87.92%), Postives = 144/149 (96.64%), Query Frame = -3
Query:  370 VLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 816
            VLPWLTMAV AN GGWIADTLVS+GLS+T VRKIMQSIGFLGPAFFLTQLSH+ +PAMAVLCMACSQG+DAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ GSWDDVFKV+VVLY++GTLVWNLF+TGE++++
Sbjct:  381 VLPWLTMAVSANFGGWIADTLVSRGLSVTTVRKIMQSIGFLGPAFFLTQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVVLYLVGTLVWNLFSTGEKIID 529          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: PHT44_ORYSJ (Probable anion transporter 4, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;4 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.717e-72
Identity = 132/149 (88.59%), Postives = 143/149 (95.97%), Query Frame = -3
Query:  370 VLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 816
            VLPWLTMA+FAN+GGWIADTLV +G+SIT VRKIMQSIGFLGPA FLT LS VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ+GSWD VF+VAVVLYI+GT+VWN+F+TGE+VLE
Sbjct:  443 VLPWLTMAIFANIGGWIADTLVGRGVSITNVRKIMQSIGFLGPALFLTLLSKVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQKGSWDSVFQVAVVLYIVGTVVWNVFSTGEKVLE 591          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: ANTR1_ARATH (Sodium-dependent phosphate transport protein 1, chloroplastic OS=Arabidopsis thaliana GN=ANTR1 PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.402e-66
Identity = 115/149 (77.18%), Postives = 136/149 (91.28%), Query Frame = -3
Query:  370 VLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 816
            V PW+TMA+ AN GGWIADTLVS+G S+T VRKIMQ+IGFLGPAFFLTQL H+ +P MAVLCMACSQG+DAFSQSGLYSNHQDI PRY+GVLLGLSNTAGVLAGV GTAATG+ILQ GSWDDVF ++V LY++GT++WNLF+TGE++++
Sbjct:  364 VFPWMTMAISANAGGWIADTLVSRGFSVTNVRKIMQTIGFLGPAFFLTQLKHIDSPTMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVLGTAATGHILQHGSWDDVFTISVGLYLVGTVIWNLFSTGEKIID 512          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: ANTR3_ARATH (Probable anion transporter 3, chloroplastic OS=Arabidopsis thaliana GN=ANTR3 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.798e-29
Identity = 69/147 (46.94%), Postives = 89/147 (60.54%), Query Frame = -3
Query:  376 LPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTLVWNLFATGERV 813
            LPW TMA+     G  +D L+  G S+T+VRKIMQSIGF+GP   L  L+  ++P+ A + M  +    +FSQ+G   N QDI P+YAG L G+SN AG LA +  T  TGY +Q  GS+     V   LY   T+ W LFATGERV
Sbjct:  365 LPWATMAISGYYAGAASDFLIRTGHSVTSVRKIMQSIGFMGPGLSLLCLNFAKSPSCAAVFMTIALSLSSFSQAGFLLNMQDIAPQYAGFLHGISNCAGTLAAIVSTIGTGYFVQWLGSFQAFLTVTAFLYFATTVFWLLFATGERV 511          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: PHT43_ORYSJ (Probable anion transporter 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;3 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.231e-29
Identity = 65/147 (44.22%), Postives = 90/147 (61.22%), Query Frame = -3
Query:  376 LPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR-GSWDDVFKVAVVLYIIGTLVWNLFATGERV 813
            LPW+ MAV   + G ++D L+  G SIT  RKIMQ+IGF+GP   L  L+  ++P +A   +  + G  +F  SG   N Q+I P+YAGVL G+SNTAG  A + GT   G+ + R GS+     +  +LY   TL W++FATGERV
Sbjct:  367 LPWVMMAVLGYVAGVVSDRLIQNGTSITLTRKIMQTIGFVGPGVALLGLNAAKSPVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYAGVLHGMSNTAGTFAAILGTVGAGFFVDRMGSFRGFLILTSLLYFSSTLFWDIFATGERV 513          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: PHT42_ORYSJ (Probable anion transporter 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.425e-26
Identity = 61/149 (40.94%), Postives = 88/149 (59.06%), Query Frame = -3
Query:  370 LPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTLVWNLFATGERVLE 813
            +PW  MA+   + G  AD L+  G S+  VRKIMQSIGF+GP   L  L   +TP++A + M  +    +FSQ+G + N QDI P+YAG L GL+N  G +A +  T  TGY +Q  GS+     +  VLY   T+ +N +ATG+ + +
Sbjct:  387 IPWAVMALSGYVAGASADFLIKSGFSVALVRKIMQSIGFIGPGVSLLCLRFAQTPSVAAVLMTIALSLSSFSQAGYFCNVQDIAPKYAGSLHGLTNGIGTVAAIVSTIGTGYFVQWLGSFQAFLTLTAVLYFSATVFYNTYATGDLIFD 535          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: PHT46_ORYSJ (Probable anion transporter 6 OS=Oryza sativa subsp. japonica GN=PHT4;6 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.861e-26
Identity = 63/161 (39.13%), Postives = 98/161 (60.87%), Query Frame = -3
Query:  370 VLPWLTMAVFANMGGWIADTLVS-KGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-----------SWDDVFKVAVVLYIIGTLVWNLFATGERVLE 816
            +LP+L M +F+N+GG +AD L++ K LS+T  RK++ ++GF+  A  L  L   RTP+ A+ C + S G  A  ++G   NH D+ P++AG+++G+SNTAG LAG+ G   TG IL+             SW  VF V   L I  + ++ +F+TGE++ E
Sbjct:  268 MLPYLNMFLFSNIGGVLADHLITRKILSVTKTRKLLNTVGFVVSAIALMALPLFRTPSGAIFCSSVSLGFLALGRAGFAVNHMDVAPKFAGIVMGISNTAGTLAGIVGVGLTGRILEAAKASNMDLTSSESWRTVFFVPGYLCIFSSFIFLIFSTGEKIFE 428          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: PHT47_ORYSJ (Probable anion transporter 7 OS=Oryza sativa subsp. japonica GN=PHT4;7 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.174e-26
Identity = 63/161 (39.13%), Postives = 98/161 (60.87%), Query Frame = -3
Query:  370 VLPWLTMAVFANMGGWIADTLVSKG-LSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-----------SWDDVFKVAVVLYIIGTLVWNLFATGERVLE 816
            +LP+  M +F+N+GG +AD L+++  LSIT  RK++ +IGF+  A  L  L   RTP+  VLC + S G  A  ++G   NH D+ P++AG+++G+SNTAG LAG+ G   TG IL+             +W  VF V   L I  ++++ +F+TGE++ E
Sbjct:  279 MLPYFNMFIFSNIGGVVADHLITRRILSITKTRKLLNTIGFVVSAVALMALPLFRTPSGTVLCSSISLGFLALGRAGFAVNHMDVAPKFAGIVMGVSNTAGTLAGIVGVGLTGSILEGAKASNMDLTNSETWKTVFFVPGYLCIFSSIIFLIFSTGEKIFE 439          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: ANTR4_ARATH (Probable anion transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ANTR4 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.687e-25
Identity = 59/147 (40.14%), Postives = 88/147 (59.86%), Query Frame = -3
Query:  376 LPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTLVWNLFATGERV 813
            +PW  MA    + G+ +D L+ +G SIT  RKIMQSIGF+GP   L  L+  + P +A   ++ + G  +FS  G   N Q+I P Y+GVL G+  TAG LA + GT   G+ ++  GS+     +  +LY++  L +N++ATGERV
Sbjct:  381 VPWSMMAFTGYIAGFWSDLLIRRGTSITLTRKIMQSIGFIGPGIALIGLTTAKQPLVASAWLSLAVGLKSFSHLGFLINLQEIAPEYSGVLHGMCLTAGTLAAIVGTVGAGFFVELLGSFQGFILLTAILYLLSALFYNIYATGERV 527          
The following BLAST results are available for this feature:
BLAST of CV712972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
ANTR2_ARATH1.149e-7693.29Probable anion transporter 2, chloroplastic OS=Ara... [more]
PHT41_ORYSJ1.189e-7387.92Probable anion transporter 1, chloroplastic OS=Ory... [more]
PHT44_ORYSJ1.717e-7288.59Probable anion transporter 4, chloroplastic OS=Ory... [more]
ANTR1_ARATH2.402e-6677.18Sodium-dependent phosphate transport protein 1, ch... [more]
ANTR3_ARATH1.798e-2946.94Probable anion transporter 3, chloroplastic OS=Ara... [more]
PHT43_ORYSJ5.231e-2944.22Probable anion transporter 3, chloroplastic OS=Ory... [more]
PHT42_ORYSJ1.425e-2640.94Probable anion transporter 2, chloroplastic OS=Ory... [more]
PHT46_ORYSJ1.861e-2639.13Probable anion transporter 6 OS=Oryza sativa subsp... [more]
PHT47_ORYSJ3.174e-2639.13Probable anion transporter 7 OS=Oryza sativa subsp... [more]
ANTR4_ARATH2.687e-2540.14Probable anion transporter 4, chloroplastic OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002C09_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712972 ID=CV712972; Name=CV712972; organism=Citrus sinensis; type=EST; length=818bp
ATTAAAGCAGCAGAATATAATGGGTTAATTAAAGAACATATGAGGTTTCC
TTTGAAGCATTACATGAGCTCAGGCGAAGGTTTAATGGGTGCAAATTTCC
CATCTCGTTCCCTGGGATTGGAAAAATGTATATAGGAAAGAAAAACCTCT
AAAAGGGCATTTCAGAAACTCAAAAGTTGTAAAAGGGCCTCGCTAATCGG
CGAATATCTTCCCTAGTAGCATCTTAATTTAACCTTGCTTAGCAGGGTTT
CATGCCCCAGCATGGATGGCATTGTTATCGCCTTTTGATTTTCCTTCAAT
TTCTTGATGACTTGGTCTCTTCTTCTTTACTCATTACAGCATCTTCCTCC
CATTCTTGCACTTCGTCTACTCAAGAACTCTCTCTCCCGTTGCAAATAAG
TTCCAGACTAAGGTGCCAATGATGTATAAGACAACAGCTACCTTGAATAC
ATCATCCCAAGAACCTCGTTGGAGTATGTAACCGGTTGCAGCTGTACCGA
AAACACCAGCAAGCACTCCTGCTGTGTTTGATAGTCCTAAGAGAACTCCA
GCATAGCGCGGCCCAATATCTTGATGATTGGAATAAAGACCAGATTGTGA
GAATGCATCAGATCCCTGACTGCATGCCATGCATAGCACTGCCATTGCAG
GAGTCCTGACATGGCTCAGCTGTGTGAGAAAGAAGGCTGGTCCCAAAAAC
CCAATGGATTGCATGATCTTACGAACTGCTGTTATGGAAAGTCCTTTGCT
AACAAGTGTATCTGCAATCCAGCCTCCCATATTTGCAAAAACAGCCATGG
TCAACCAAGGCAAGACAC
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