CV712948

Overview
NameCV712948
Unique NameCV712948
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV712948 vs. ExPASy Swiss-Prot
Match: NUDT3_ARATH (Nudix hydrolase 3 OS=Arabidopsis thaliana GN=NUDT3 PE=1 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 1.569e-89
Identity = 159/213 (74.65%), Postives = 184/213 (86.38%), Query Frame = 1 
Query:    1 AKFKNILRPIADVCIRKEQQELVDFDSFFTHNICHECCHGIGPHSITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 639
            AKF++IL+PIA++ I KEQ+ LVDFDSFFTH ICHECCHGIGPH+ITLP G+ STVR ELQE+HSAMEEAKADIVGLWALKFLI + LL KS+V+SMYVSFLAGCFRS+RFGL E+HGKGQALQFN+L+EK AF+ H D TFSVDF K+EGAVESLS EILTIQ +GDK AA+LLL KYCT+T PLK AL+ LE V+VPVDI+PTF     L+
Sbjct:  559 AKFEHILKPIAEITISKEQRGLVDFDSFFTHTICHECCHGIGPHTITLPGGQTSTVRKELQEVHSAMEEAKADIVGLWALKFLITKGLLSKSMVESMYVSFLAGCFRSIRFGLTEAHGKGQALQFNYLYEKGAFVFHEDSTFSVDFAKIEGAVESLSHEILTIQGKGDKNAATLLLNKYCTITGPLKTALENLERVKVPVDISPTFPLAEALM 771
The following BLAST results are available for this feature:
BLAST of CV712948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NUDT3_ARATH1.569e-8974.65Nudix hydrolase 3 OS=Arabidopsis thaliana GN=NUDT3... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0002B20_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712948 ID=CV712948; Name=CV712948; organism=Citrus sinensis; type=EST; length=703bp
GCAAAGTTCAAGAATATTCTTCGGCCCATAGCTGATGTATGTATCAGAAA
GGAACAGCAGGAACTTGTAGATTTTGATTCTTTCTTCACTCACAACATCT
GCCATGAGTGCTGCCATGGTATTGGGCCTCATAGCATCACACTTCCAGAT
GGTCGACAGTCTACAGTGAGATTGGAACTGCAAGAACTTCACTCAGCTAT
GGAAGAAGCAAAAGCTGACATTGTTGGCCTTTGGGCACTGAAGTTTCTAA
TCGGCAGGGATTTGCTTCCAAAGAGTTTGGTGAAATCCATGTATGTCTCT
TTCCTGGCGGGGTGTTTCCGTTCAGTGCGATTTGGCTTAGAGGAATCTCA
TGGAAAAGGACAAGCACTGCAGTTTAACTGGTTGTTTGAGAAAGAAGCCT
TTATTCTGCATTCAGATGATACCTTTTCTGTTGATTTTGACAAGGTTGAA
GGTGCAGTCGAAAGCCTGAGTACAGAAATACTCACCATACAGGCAAGAGG
TGACAAAGAGGCTGCAAGTTTGCTTCTTCAGAAATATTGTACAATGACAC
AGCCACTAAAAGTTGCATTACAAAAATTGGAGAACGTTCAGGTTCCTGTG
GATATAGCTCCCACATTCACTGCAGTCAACAAATTGCTGCAGTAAAGGAA
ACTACATGGAATGTGATGATTAAAAAGGAACTTTTTCACCAATCAAGTCC
TGA
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