CV712947

Overview
NameCV712947
Unique NameCV712947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV712947 vs. ExPASy Swiss-Prot
Match: NUDT3_ARATH (Nudix hydrolase 3 OS=Arabidopsis thaliana GN=NUDT3 PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.862e-66
Identity = 125/169 (73.96%), Postives = 144/169 (85.21%), Query Frame = -3 
Query:  285 SITLPDGRQSTVRLELQELHSAMEEAKADIVGLWALKFLIGRDLLPKSLVKSMYVSFLAGCFRSVRFGLEESHGKGQALQFNWLFEKEAFILHSDDTFSVDFDKVEGAVESLSTEILTIQARGDKEAASLLLQKYCTMTQPLKVALQKLENVQVPVDIAPTFTAVNKLL 791
            +ITLP G+ STVR ELQE+HSAMEEAKADIVGLWALKFLI + LL KS+V+SMYVSFLAGCFRS+RFGL E+HGKGQALQFN+L+EK AF+ H D TFSVDF K+EGAVESLS EILTIQ +GDK AA+LLL KYCT+T PLK AL+ LE V+VPVDI+PTF     L+
Sbjct:  603 TITLPGGQTSTVRKELQEVHSAMEEAKADIVGLWALKFLITKGLLSKSMVESMYVSFLAGCFRSIRFGLTEAHGKGQALQFNYLYEKGAFVFHEDSTFSVDFAKIEGAVESLSHEILTIQGKGDKNAATLLLNKYCTITGPLKTALENLERVKVPVDISPTFPLAEALM 771
The following BLAST results are available for this feature:
BLAST of CV712947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NUDT3_ARATH3.862e-6673.96Nudix hydrolase 3 OS=Arabidopsis thaliana GN=NUDT3... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0002B20_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712947 ID=CV712947; Name=CV712947; organism=Citrus sinensis; type=EST; length=793bp
CTTCATTATTGTAGTTAACAAGAATGCAAACCACGTCTGAATCACATCAG
TTTGAAAATTACAAAACAAAGAGTTACATTATAAAAACATAAAAAAATAA
TCATAAGCATTCTGTTGAAATCAAACAAGAAATTATTCAAGCTTTAATGA
TATACAGATTTTCCTGCCTTTAAAATGATTCAAGCTTTAAGAAGGCATTA
TTCAACTATCTGCTATTCGATCAGGACTTGATTGGTGAAAAAGTTCCTTT
TTAATCATCACATTCCATGTAGTTTCCTTTACTGCAGCAATTTGTTGACT
GCAGTGAATGTGGGAGCTATATCCACAGGAACCTGAACGTTCTCCAATTT
TTGTAATGCAACTTTTAGTGGCTGTGTCATTGTACAATATTTCTGAAGAA
GCAAACTTGCAGCCTCTTTGTCACCTCTTGCCTGTATGGTGAGTATTTCT
GTACTCAGGCTTTCGACTGCACCTTCAACCTTGTCAAAATCAACAGAAAA
GGTATCATCTGAATGCAGAATAAAGGCTTCTTTCTCAAACAACCAGTTAA
ACTGCAGTGCTTGTCCTTTTCCATGAGATTCCTCTAAGCCAAATCGCACT
GAACGGAAACACCCCGCCAGGAAAGAGACATACATGGATTTCACCAAACT
CTTTGGAAGCAAATCCCTGCCGATTAGAAACTTCAGTGCCCAAAGGCCAA
CAATGTCAGCTTTTGCTTCTTCCATAGCTGAGTGAAGTTCTTGCAGTTCC
AATCTCACTGTAGACTGTCGACCATCTGGAAGTGTGATGCTAT
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