CV712848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712848 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP6 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ispH PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.082e-24 Identity = 39/67 (58.21%), Postives = 54/67 (80.60%), Query Frame = -1 Query: 292 QERQDAMY*LVEEKIDLILLVGRWNSSTTSSLQKIAEDRGISSYWIDSEKRIGPGNKIAHKLMHGEL 492 QERQDAM+ LVEE +DLI+++G +NSS T+ LQ+IA +R I S+ ID+ +RIGPGN+I HK +H +L Sbjct: 292 QERQDAMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDL 358 HSP 2 Score: 50.8322 bits (120), Expect = 8.082e-24 Identity = 19/34 (55.88%), Postives = 30/34 (88.24%), Query Frame = -3 Query: 176 WLPKGQITIGVTAGASIPDKAVENVLKKVFEIER 277 WLP G +TIG+T+GAS PDK VE+V++++F+++R Sbjct: 364 WLPAGPLTIGITSGASTPDKVVEDVIERLFDLQR 397
BLAST of CV712848 vs. ExPASy Swiss-Prot
Match: ISPH_SYNE7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=ispH PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.082e-24 Identity = 39/67 (58.21%), Postives = 54/67 (80.60%), Query Frame = -1 Query: 292 QERQDAMY*LVEEKIDLILLVGRWNSSTTSSLQKIAEDRGISSYWIDSEKRIGPGNKIAHKLMHGEL 492 QERQDAM+ LVEE +DLI+++G +NSS T+ LQ+IA +R I S+ ID+ +RIGPGN+I HK +H +L Sbjct: 292 QERQDAMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDL 358 HSP 2 Score: 50.8322 bits (120), Expect = 8.082e-24 Identity = 19/34 (55.88%), Postives = 30/34 (88.24%), Query Frame = -3 Query: 176 WLPKGQITIGVTAGASIPDKAVENVLKKVFEIER 277 WLP G +TIG+T+GAS PDK VE+V++++F+++R Sbjct: 364 WLPAGPLTIGITSGASTPDKVVEDVIERLFDLQR 397
BLAST of CV712848 vs. ExPASy Swiss-Prot
Match: ISPH_CYAA5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain ATCC 51142) GN=ispH PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.015e-23 Identity = 38/71 (53.52%), Postives = 56/71 (78.87%), Query Frame = -1 Query: 280 QERQDAMY*LVEEKIDLILLVGRWNSSTTSSLQKIAEDRGISSYWIDSEKRIGPGNKIAHKLMHGELVEKK 492 QERQDAM LVEE++D+++++G +NSS T+ LQ+I+ ++GI SY IDS+KRI PGNKI HK + ++ K+ Sbjct: 292 QERQDAMLNLVEEEVDVMVVIGGFNSSNTTHLQEISIEKGIDSYHIDSDKRILPGNKIEHKPLEKDIETKE 362 HSP 2 Score: 50.447 bits (119), Expect = 3.015e-23 Identity = 20/34 (58.82%), Postives = 29/34 (85.29%), Query Frame = -3 Query: 185 EKNWLPKGQITIGVTAGASIPDKAVENVLKKVFE 286 ++NWLP G+I +GVT+GAS PDK VE V++++FE Sbjct: 361 KENWLPDGKIIVGVTSGASTPDKVVEAVIERIFE 394
BLAST of CV712848 vs. ExPASy Swiss-Prot
Match: ISPH_THEEB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispH PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.124e-22 Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = -1 Query: 301 QERQDAMY*LVEEKIDLILLVGRWNSSTTSSLQKIAEDRGISSYWIDSEKRIGPGNKIAHKLMH 492 QERQDAM LV+E +DL++++G +NSS T+ LQ+IA + GI SY IDS RIGPGN+I HK +H Sbjct: 292 QERQDAMLSLVKEPLDLMVVIGGYNSSNTTHLQEIAIEHGIPSYHIDSADRIGPGNRIEHKPLH 355 HSP 2 Score: 49.2914 bits (116), Expect = 1.124e-22 Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = -3 Query: 182 KNWLPKGQITIGVTAGASIPDKAVENVLKKVFEI 283 +NWLP ITIG+T+GAS PDK VE VL K+F + Sbjct: 362 ENWLPDRPITIGITSGASTPDKVVEEVLNKIFAL 395
BLAST of CV712848 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispH PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.903e-22 Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = -1 Query: 280 QERQDAMY*LVEEKIDLILLVGRWNSSTTSSLQKIAEDRGISSYWIDSEKRIGPGNKIAHKLMHGELVEKK 492 QERQDAM+ LVE +DL++++G +NSS T+ LQ+I+ +R I SY IDS RIGPGN++ HK +H L K+ Sbjct: 293 QERQDAMFKLVEYPLDLMVVIGGFNSSNTTHLQEISIEREIPSYHIDSADRIGPGNRVEHKPLHRPLEIKE 363 HSP 2 Score: 50.447 bits (119), Expect = 1.903e-22 Identity = 19/36 (52.78%), Postives = 30/36 (83.33%), Query Frame = -3 Query: 179 EKNWLPKGQITIGVTAGASIPDKAVENVLKKVFEIE 286 ++NWLP+G I +G+T+GAS PDK V +VL+K+F ++ Sbjct: 362 KENWLPEGPIVVGITSGASTPDKVVSDVLEKIFALK 397
BLAST of CV712848 vs. ExPASy Swiss-Prot
Match: ISPH_ACAM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=ispH PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.188e-22 Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -1 Query: 292 QERQDAMY*LVEEKIDLILLVGRWNSSTTSSLQKIAEDRGISSYWIDSEKRIGPGNKIAHKLMHGEL 492 QERQDA++ LV+E +DL++++G +NSS T+ LQ+I+ D+ I SY IDS RIGPGN++ HK ++ +L Sbjct: 301 QERQDAIFQLVDEPLDLMVVIGGFNSSNTTHLQEISIDKNIPSYHIDSVDRIGPGNRVEHKPLNADL 367 HSP 2 Score: 49.6766 bits (117), Expect = 4.188e-22 Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = -3 Query: 167 NWLPKGQITIGVTAGASIPDKAVENVLKKVFEIEREEA 280 NWLP G + IGVT+GAS PDK V ++++K+F I+ A Sbjct: 372 NWLPNGPLAIGVTSGASTPDKVVSDIVEKIFSIKSASA 409
BLAST of CV712848 vs. ExPASy Swiss-Prot
Match: ISPH_ANAVT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispH PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.453e-22 Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = -1 Query: 289 QERQDAMY*LVEEKIDLILLVGRWNSSTTSSLQKIAEDRGISSYWIDSEKRIGPGNKIAHKLMHGELV 492 QERQDAM LV+E +DL++++G +NSS T+ LQ+I+++RG+ SY ID +RI N I H+ ++GELV Sbjct: 292 QERQDAMLELVQENLDLMIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSVNSIEHRQLNGELV 359 HSP 2 Score: 52.373 bits (124), Expect = 5.453e-22 Identity = 21/40 (52.50%), Postives = 32/40 (80.00%), Query Frame = -3 Query: 164 KNWLPKGQITIGVTAGASIPDKAVENVLKKVFEIEREEAL 283 +NWLP G+I +GVT+GAS PDK VE+V++K+F ++ A+ Sbjct: 362 ENWLPAGKIVVGVTSGASTPDKVVEDVIEKIFALKATTAV 401
BLAST of CV712848 vs. ExPASy Swiss-Prot
Match: ISPH_ANASP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=ispH PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 7.094e-22 Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = -1 Query: 289 QERQDAMY*LVEEKIDLILLVGRWNSSTTSSLQKIAEDRGISSYWIDSEKRIGPGNKIAHKLMHGELV 492 QERQDAM LV+E +DL++++G +NSS T+ LQ+I+++RG+ SY ID +RI N I H+ ++GELV Sbjct: 292 QERQDAMLELVQENLDLMIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSINSIEHRQLNGELV 359 HSP 2 Score: 52.373 bits (124), Expect = 7.094e-22 Identity = 21/40 (52.50%), Postives = 32/40 (80.00%), Query Frame = -3 Query: 164 KNWLPKGQITIGVTAGASIPDKAVENVLKKVFEIEREEAL 283 +NWLP G+I +GVT+GAS PDK VE+V++K+F ++ A+ Sbjct: 362 ENWLPAGKIVVGVTSGASTPDKVVEDVIEKIFALKATAAV 401
BLAST of CV712848 vs. ExPASy Swiss-Prot
Match: ISPH_SYNY3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=ispH PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 7.102e-22 Identity = 36/67 (53.73%), Postives = 50/67 (74.63%), Query Frame = -1 Query: 292 QERQDAMY*LVEEKIDLILLVGRWNSSTTSSLQKIAEDRGISSYWIDSEKRIGPGNKIAHKLMHGEL 492 QERQDAM+ LVEE + L++++G +NSS T+ LQ+IA + GI S IDS RIGPGN++ HK + +L Sbjct: 265 QERQDAMFDLVEEDLSLMVVIGGFNSSNTTHLQEIAVEHGIPSVHIDSGDRIGPGNRVEHKPLGKDL 331 HSP 2 Score: 51.9878 bits (123), Expect = 7.102e-22 Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = -3 Query: 155 WLPKGQITIGVTAGASIPDKAVENVLKKVFEI-EREEALQLA 277 WLP G+IT+GVT+GAS PDK VE V+KK+ I E + L++A Sbjct: 337 WLPAGKITVGVTSGASTPDKVVEEVMKKILAIKEAQPVLEIA 378
BLAST of CV712848 vs. ExPASy Swiss-Prot
Match: ISPH_NOSP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispH PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.819e-21 Identity = 33/68 (48.53%), Postives = 51/68 (75.00%), Query Frame = -1 Query: 289 QERQDAMY*LVEEKIDLILLVGRWNSSTTSSLQKIAEDRGISSYWIDSEKRIGPGNKIAHKLMHGELV 492 QERQDAM LVE ++L++++G +NSS T+ LQ+IA +R I SY ID+ +RI G+ I H+ ++G+L+ Sbjct: 292 QERQDAMLELVEHNLNLMVVIGGFNSSNTTQLQQIAFERRIPSYHIDTVERIKSGDSIEHRQLNGQLI 359 HSP 2 Score: 53.9138 bits (128), Expect = 5.819e-21 Identity = 21/40 (52.50%), Postives = 32/40 (80.00%), Query Frame = -3 Query: 164 KNWLPKGQITIGVTAGASIPDKAVENVLKKVFEIEREEAL 283 +NWLP G+I +G+T+GAS PDK VE+V++K+F ++ AL Sbjct: 362 ENWLPDGEIVVGITSGASTPDKVVEDVIEKIFAVKATAAL 401 The following BLAST results are available for this feature:
BLAST of CV712848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712848 ID=CV712848; Name=CV712848; organism=Citrus sinensis; type=EST; length=834bpback to top |