CV712830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712830 vs. ExPASy Swiss-Prot
Match: PSB5A_ARATH (Proteasome subunit beta type-5-A OS=Arabidopsis thaliana GN=PBE1 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.086e-34 Identity = 67/88 (76.14%), Postives = 71/88 (80.68%), Query Frame = 2 Query: 2 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAE 265 FSVGSGSPYAYGVLDSGYK+DMS+ IYHATFRD ASGGVASVY+VGP GW KLSGDDVGELHYHYYPV P+T EQ M E Sbjct: 183 FSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEGWTKLSGDDVGELHYHYYPVAPATAEQVMEE 270
BLAST of CV712830 vs. ExPASy Swiss-Prot
Match: PSB5_SPIOL (Proteasome subunit beta type-5 OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.031e-34 Identity = 64/92 (69.57%), Postives = 76/92 (82.61%), Query Frame = 2 Query: 2 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVAGA 277 FSVGSGSPYAYGVLD+GYK+DM++ IYHAT+RD ASGGV SVY+VGP+GWKK++GDDVG+LH+ YYPV P+TVEQEM EV GA Sbjct: 181 FSVGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGVVSVYHVGPDGWKKVTGDDVGDLHFQYYPVVPATVEQEMVEVVGA 272
BLAST of CV712830 vs. ExPASy Swiss-Prot
Match: PSB5B_ARATH (Proteasome subunit beta type-5-B OS=Arabidopsis thaliana GN=PBE2 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.031e-34 Identity = 68/90 (75.56%), Postives = 70/90 (77.78%), Query Frame = 2 Query: 2 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMAEVA 271 FSVGSGSPYAYGVLDSGYKFDMS+ IYHATFRD ASGGVASVY+VGP GW KLSGDDVGELHYHYYPV P T E M E A Sbjct: 183 FSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPQGWTKLSGDDVGELHYHYYPVAPITAEHVMEEAA 272
BLAST of CV712830 vs. ExPASy Swiss-Prot
Match: PSB5_DICDI (Proteasome subunit beta type-5 OS=Dictyostelium discoideum GN=psmB5 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.539e-17 Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 2 Query: 2 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 238 FS GSGS YAYGVLD+G+K+DM+ +YHAT RDA SGG +VY+V +GWKK+S DD +L+ YY + P Sbjct: 188 FSCGSGSTYAYGVLDTGFKWDMNDEEAYELGRRAVYHATHRDAYSGGAINVYHVQKDGWKKISSDDCFKLYQKYYNIVP 266
BLAST of CV712830 vs. ExPASy Swiss-Prot
Match: PSB5_PONAB (Proteasome subunit beta type-5 OS=Pongo abelii GN=PSMB5 PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16 Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 2 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 238 FSVGSGS YAYGV+D GY +D+ + IY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y TP Sbjct: 185 FSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSTP 263
BLAST of CV712830 vs. ExPASy Swiss-Prot
Match: PSB5_HUMAN (Proteasome subunit beta type-5 OS=Homo sapiens GN=PSMB5 PE=1 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16 Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 2 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 238 FSVGSGS YAYGV+D GY +D+ + IY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y TP Sbjct: 185 FSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKYSGSTP 263
BLAST of CV712830 vs. ExPASy Swiss-Prot
Match: PSB5_MOUSE (Proteasome subunit beta type-5 OS=Mus musculus GN=Psmb5 PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 2.457e-15 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 2 Query: 2 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVT 235 FSVGSGS YAYGV+D GY +D+ + IY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y V+ Sbjct: 185 FSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYSSVS 262
BLAST of CV712830 vs. ExPASy Swiss-Prot
Match: PSB5_BOVIN (Proteasome subunit beta type-5 OS=Bos taurus GN=PSMB5 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.209e-15 Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 2 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 223 FSVGSGS YAYGV+D GY +D+ + IY AT+RDA SGG S+Y+V +GW ++S D+V +LH Y Sbjct: 185 FSVGSGSVYAYGVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGSVSLYHVREDGWIRVSSDNVADLHDKY 258
BLAST of CV712830 vs. ExPASy Swiss-Prot
Match: PSB5_RAT (Proteasome subunit beta type-5 OS=Rattus norvegicus GN=Psmb5 PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 9.336e-15 Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 2 Query: 2 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTP 238 FSVGSGS YA+GV+D GY +D+ + IY AT+RDA SGG ++Y+V +GW ++S D+V +LH Y P Sbjct: 185 FSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKYTSSIP 263
BLAST of CV712830 vs. ExPASy Swiss-Prot
Match: PSB5_CHICK (Proteasome subunit beta type-5 (Fragment) OS=Gallus gallus GN=PSMB5 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.761e-13 Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 2 Query: 2 FSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHY 223 F+VGSGS YAYGVLD G + DM+ I+ A RDA SGG +VY+VGP GW+++S DV LH Y Sbjct: 181 FAVGSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSVTVYHVGPRGWRRVSSHDVAGLHDGY 254 The following BLAST results are available for this feature:
BLAST of CV712830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712830 ID=CV712830; Name=CV712830; organism=Citrus sinensis; type=EST; length=529bpback to top |