CV712791

Overview
NameCV712791
Unique NameCV712791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6910 contig Csv1_Contig6910:206..960. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
[Close]
BLAST of CV712791 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSJ (Uncharacterized protein ycf68 OS=Oryza sativa subsp. japonica GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11
Identity = 39/59 (66.10%), Postives = 41/59 (69.49%), Query Frame = 1 
Query:   25 KNGAPNNVSSQTKNYEIAPFISFWGDGGIVXXXXXXXXXXXXGGLEKAAINRIFLILPS 201
            +NGAPNN SSQTKNYEI   +SFWGDGGIV            GGLEKAAINR  LILPS
Sbjct:   79 ENGAPNNASSQTKNYEIT--LSFWGDGGIV--PFEPFFHAFPGGLEKAAINRTSLILPS 133
[Close]
BLAST of CV712791 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSI (Uncharacterized protein ycf68 OS=Oryza sativa subsp. indica GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11
Identity = 39/59 (66.10%), Postives = 41/59 (69.49%), Query Frame = 1 
Query:   25 KNGAPNNVSSQTKNYEIAPFISFWGDGGIVXXXXXXXXXXXXGGLEKAAINRIFLILPS 201
            +NGAPNN SSQTKNYEI   +SFWGDGGIV            GGLEKAAINR  LILPS
Sbjct:   79 ENGAPNNASSQTKNYEIT--LSFWGDGGIV--PFEPFFHAFPGGLEKAAINRTSLILPS 133
[Close]
BLAST of CV712791 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSA (Uncharacterized protein ycf68 OS=Oryza sativa GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11
Identity = 39/59 (66.10%), Postives = 41/59 (69.49%), Query Frame = 1 
Query:   25 KNGAPNNVSSQTKNYEIAPFISFWGDGGIVXXXXXXXXXXXXGGLEKAAINRIFLILPS 201
            +NGAPNN SSQTKNYEI   +SFWGDGGIV            GGLEKAAINR  LILPS
Sbjct:   79 ENGAPNNASSQTKNYEIT--LSFWGDGGIV--PFEPFFHAFPGGLEKAAINRTSLILPS 133
[Close]
BLAST of CV712791 vs. ExPASy Swiss-Prot
Match: YCF68_ORYNI (Uncharacterized protein ycf68 OS=Oryza nivara GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11
Identity = 39/59 (66.10%), Postives = 41/59 (69.49%), Query Frame = 1 
Query:   25 KNGAPNNVSSQTKNYEIAPFISFWGDGGIVXXXXXXXXXXXXGGLEKAAINRIFLILPS 201
            +NGAPNN SSQTKNYEI   +SFWGDGGIV            GGLEKAAINR  LILPS
Sbjct:   79 ENGAPNNASSQTKNYEIT--LSFWGDGGIV--PFEPFFHAFPGGLEKAAINRTSLILPS 133
The following BLAST results are available for this feature:
BLAST of CV712791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
YCF68_ORYSJ1.935e-1166.10Uncharacterized protein ycf68 OS=Oryza sativa subs... [more]
YCF68_ORYSI1.935e-1166.10Uncharacterized protein ycf68 OS=Oryza sativa subs... [more]
YCF68_ORYSA1.935e-1166.10Uncharacterized protein ycf68 OS=Oryza sativa GN=y... [more]
YCF68_ORYNI1.935e-1166.10Uncharacterized protein ycf68 OS=Oryza nivara GN=y... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0001O11_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712791 ID=CV712791; Name=CV712791; organism=Citrus sinensis; type=EST; length=755bp
TTTAGGTTCGGCCTCAATGGGAAAAAAAATGGAGCACCTAACAACGTATC
TTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTTCATTCTGGGGTG
ACGGAGGGATCGTACCATTCGAGCCTTTTTTTTTTTTTCATGCTTTTCCC
GGAGGTCTGGAGAAAGCTGCAATCAATAGGATTTTCCTAATCCTCCCTTC
CCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTTCCTTTCCGCAGGGACC
AGGAGATTGGATCTAGCCGTAAGAAGAATGCTTGGCTGATAAATAACTCA
CTTCTTGGTCTTCGACCCCCTCAGTCACTACGAACGCCCCCGAGCGGTGC
AATGGGATGTGTCTATTTATCTATCTCTTGACTCGAAATGGGAGCAGGTT
TGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCGGGAGGGCCTCTTAAC
GCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAATACGTGCCATGAT
AAGGAAGAGGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGA
GTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCCGT
TGATTCTCTCCCAATTGGTTGGACCGTAGGTGCGATGATTTACTTCACGG
GCGAGGTCTCTGGTTCAAATCCAGGATGGCCCAGCTGCGCCAAGGAAAAG
AAAAAGAATAGAAGAAGCGTCGGACTCCTTCATGCATGCTCCACTTGGCT
CGGGG
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