EY660466

Overview
NameEY660466
Unique NameEY660466
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9664 contig Csv1_Contig9664:980..1440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CATB_PIG (Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 5.275e-25
Identity = 43/76 (56.58%), Postives = 60/76 (78.95%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 228
            Y DF  YKSGVY+H+TGD+MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE ++VAG+P
Sbjct:  256 YSDFLQYKSGVYQHVTGDLMGGHAIRILGWGV-ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGIP 330          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CATB_PONAB (Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.889e-25
Identity = 45/85 (52.94%), Postives = 65/85 (76.47%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 255
            Y DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  256 YSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CATB_MACFA (Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.889e-25
Identity = 45/85 (52.94%), Postives = 65/85 (76.47%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 255
            Y DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  256 YSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CATB_HUMAN (Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 6.889e-25
Identity = 45/85 (52.94%), Postives = 65/85 (76.47%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 255
            Y DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  256 YSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CPR4_CAEEL (Cathepsin B-like cysteine proteinase 4 OS=Caenorhabditis elegans GN=cpr-4 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 8.997e-25
Identity = 46/76 (60.53%), Postives = 60/76 (78.95%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 228
            YEDF  YK+GVY H TG  +GGHA++++GWGT D+G  YW++AN WN +WG +GYF+I RG+NECGIE  VV G+P
Sbjct:  259 YEDFYQYKTGVYVHTTGQELGGHAIRILGWGT-DNGTPYWLVANSWNVNWGENGYFRIIRGTNECGIEHAVVGGVP 333          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CATB_RAT (Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 1.535e-24
Identity = 45/79 (56.96%), Postives = 61/79 (77.22%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 237
            + DF  YKSGVYKH  GDVMGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG N CGIE ++VAG+P ++
Sbjct:  256 FSDFLTYKSGVYKHEAGDVMGGHAIRILGWGI-ENGVPYWLVANSWNVDWGDNGFFKILRGENHCGIESEIVAGIPRTQ 333          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CYSP_SCHMA (Cathepsin B-like cysteine proteinase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.419e-24
Identity = 43/74 (58.11%), Postives = 59/74 (79.73%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 222
            YEDF +YKSG+YKHITG+ +GGHA+++IGWG  ++   YW++AN WN  WG +GYF+I RG +EC IE +V+AG
Sbjct:  265 YEDFLNYKSGIYKHITGEALGGHAIRIIGWGV-ENKTPYWLIANSWNEDWGENGYFRIVRGRDECSIESEVIAG 337          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CYSP2_HAECO (Cathepsin B-like cysteine proteinase 2 OS=Haemonchus contortus GN=AC-2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.419e-24
Identity = 44/81 (54.32%), Postives = 62/81 (76.54%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNL 243
            YEDF HYKSG+YKH  G++ G HAVK+IGWG +++  D+W++AN W+  WG  GYF+I RGSN+CGIE  + AG+  +++L
Sbjct:  263 YEDFRHYKSGIYKHTAGELRGYHAVKMIGWG-NENNTDFWLIANSWHNDWGEKGYFRIVRGSNDCGIEGTIAAGIVDTESL 342          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CATB_MOUSE (Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 4.465e-24
Identity = 44/76 (57.89%), Postives = 58/76 (76.32%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 228
            + DF  YKSGVYKH  GD+MGGHA++++GWG  ++G  YW+ AN WN  WG +G+FKI RG N CGIE ++VAG+P
Sbjct:  256 FSDFLTYKSGVYKHEAGDMMGGHAIRILGWGV-ENGVPYWLAANSWNLDWGDNGFFKILRGENHCGIESEIVAGIP 330          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CATB_BOVIN (Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5)

HSP 1 Score: 109.768 bits (273), Expect = 5.832e-24
Identity = 41/76 (53.95%), Postives = 60/76 (78.95%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 228
            Y DF  YKSGVY+H++G++MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE ++VAG+P
Sbjct:  256 YSDFLLYKSGVYQHVSGEIMGGHAIRILGWGV-ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGMP 330          
The following BLAST results are available for this feature:
BLAST of EY660466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
CATB_PIG5.275e-2556.58Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1[more]
CATB_PONAB6.889e-2552.94Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1[more]
CATB_MACFA6.889e-2552.94Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV... [more]
CATB_HUMAN6.889e-2552.94Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3[more]
CPR4_CAEEL8.997e-2560.53Cathepsin B-like cysteine proteinase 4 OS=Caenorha... [more]
CATB_RAT1.535e-2456.96Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2[more]
CYSP_SCHMA3.419e-2458.11Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CYSP2_HAECO3.419e-2454.32Cathepsin B-like cysteine proteinase 2 OS=Haemonch... [more]
CATB_MOUSE4.465e-2457.89Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2[more]
CATB_BOVIN5.832e-2453.95Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-022-E07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660466 ID=EY660466; Name=EY660466; organism=Citrus sinensis; type=EST; length=461bp
TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGG
CGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTG
ATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGG
GGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTAT
TGAAGAGGATGTGGTTGCTGGTTTGCCTTCATCCAAAAATCTTGTCAAAG
AGATTACAAGTGCAGATATGTTTGAGGATGCTTCAGCTTGAGAGCAGACT
TTGCTATACCTTCATGTTGTTATTTATATATCAAATGTGTAGCTATAGGG
GTGTATCGTTGAACCTAAGCTATCAAGGCATGAAATGGGAAGCTCCCGTC
TTGCATAATTGAATGTATTAATGGAGTTTAATGTTGTGTGTAAAAATAGA
ACCAGTTGTAA
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