CV712684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_CITSI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Citrus sinensis GN=ndhD PE=3 SV=1) HSP 1 Score: 462.225 bits (1188), Expect = 1.310e-129 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFFL 715 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFFL Sbjct: 262 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFFL 499
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_VITVI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Vitis vinifera GN=ndhD PE=3 SV=1) HSP 1 Score: 428.713 bits (1101), Expect = 1.605e-119 Identity = 214/237 (90.30%), Postives = 226/237 (95.36%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 +RINMELLPHAHSIFSPW ++VGT+QIIYAASTS GQRNLKKRIAYSSVSHMGFII+GIGSITDTGLNGA+LQIISHG + AALFFLAGTSYDRIR YLDEMGG+AIP+PKIFT+FSILSMASLALPGMSGFVAELIVFFGIITSQKF LMPKI+ITFVMAIGMILTPIYSLSM RQMFYGYKLFNAPNSYFFDSGPRELFVLISI LPVIGIGIYPDFVLSLS DK EAI+SNFF Sbjct: 262 VRINMELLPHAHSIFSPWLVVVGTMQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFLGAALFFLAGTSYDRIRLIYLDEMGGIAIPMPKIFTMFSILSMASLALPGMSGFVAELIVFFGIITSQKFLLMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNAPNSYFFDSGPRELFVLISIFLPVIGIGIYPDFVLSLSVDKVEAILSNFF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_PANGI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Panax ginseng GN=ndhD PE=3 SV=1) HSP 1 Score: 422.165 bits (1084), Expect = 1.502e-117 Identity = 210/237 (88.61%), Postives = 223/237 (94.09%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 IRINMELLPHAHSIFSPW +IVGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGFI++GIGSITDTGLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AIP+PKIFT+F+ SMASLALPGMSGFVAELIVFFGIITSQK+ LMPKI+ITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSY FDSGPRELFV ISI LPVIGIG+YPDFVLSLS DK E I+SNFF Sbjct: 262 IRINMELLPHAHSIFSPWLVIVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFILIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFTSFSMASLALPGMSGFVAELIVFFGIITSQKYLLMPKILITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYVFDSGPRELFVSISIFLPVIGIGMYPDFVLSLSVDKVEVILSNFF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_PLAOC (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Platanus occidentalis GN=ndhD PE=3 SV=1) HSP 1 Score: 420.624 bits (1080), Expect = 4.371e-117 Identity = 211/237 (89.03%), Postives = 221/237 (93.25%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 +RINMELLPHAHSIFSPW MIVGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGF I+GIGSITD GLNGAVLQIISHG I AALFFLAGTSYDRIR YLDEMGG+AI +PKIFT+FS SMASLALPGMSGFVAELIVFFGIITS K+FLMPKI+ITFVMAIGMILTPIYSLSM RQMFYGYKLFNAPNSYFFDSGPRELFV ISI LPVIGIGIYPDFVLSLS DK EAI+SN+F Sbjct: 262 VRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFTIIGIGSITDAGLNGAVLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAISMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSPKYFLMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNAPNSYFFDSGPRELFVSISIFLPVIGIGIYPDFVLSLSVDKVEAILSNYF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_GOSHI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Gossypium hirsutum GN=ndhD PE=3 SV=1) HSP 1 Score: 416.387 bits (1069), Expect = 8.243e-116 Identity = 208/237 (87.76%), Postives = 223/237 (94.09%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 +RINMELLPHAHSIFSPW +IVGT+QIIYAASTS GQRNLKKRIAYSSVSHMGFII+GIGSITDTGLNGA+LQIISHG I AALFFLAGTSYDR+R YLDEMGG+A+ IPKIFT+FSILSMASLALPGMSGFVAELIVFFGIITSQK+FLMPKI+ITFVMAIGMILTPIYSLSM RQMFYGYKLFNAP+SYFFDSGPRELFV ISI LPVIGIGIYPDFVLSLS +K E I+ N+F Sbjct: 262 VRINMELLPHAHSIFSPWLIIVGTMQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRMRLVYLDEMGGMAVSIPKIFTMFSILSMASLALPGMSGFVAELIVFFGIITSQKYFLMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNAPSSYFFDSGPRELFVSISIFLPVIGIGIYPDFVLSLSGEKVETILYNYF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_GOSBA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Gossypium barbadense GN=ndhD PE=3 SV=1) HSP 1 Score: 416.387 bits (1069), Expect = 8.243e-116 Identity = 208/237 (87.76%), Postives = 223/237 (94.09%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 +RINMELLPHAHSIFSPW +IVGT+QIIYAASTS GQRNLKKRIAYSSVSHMGFII+GIGSITDTGLNGA+LQIISHG I AALFFLAGTSYDR+R YLDEMGG+A+ IPKIFT+FSILSMASLALPGMSGFVAELIVFFGIITSQK+FLMPKI+ITFVMAIGMILTPIYSLSM RQMFYGYKLFNAP+SYFFDSGPRELFV ISI LPVIGIGIYPDFVLSLS +K E I+ N+F Sbjct: 262 VRINMELLPHAHSIFSPWLIIVGTMQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRMRLVYLDEMGGMAVSIPKIFTMFSILSMASLALPGMSGFVAELIVFFGIITSQKYFLMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNAPSSYFFDSGPRELFVSISIFLPVIGIGIYPDFVLSLSGEKVETILYNYF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_CHLSC (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Chloranthus spicatus GN=ndhD PE=3 SV=1) HSP 1 Score: 414.075 bits (1063), Expect = 4.091e-115 Identity = 206/237 (86.92%), Postives = 218/237 (91.98%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 +RINMELLPHAHSIFSPW MIVGT+Q+IYAASTSPGQRNLKKRIAYSSVSHM FII+GIGSITDTGLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AIP+PKIFT+FS SMASLALPGMSGFVAE IVFFGIITS K+F MPKI+ITFVMAIGMILTPIYSLSM RQMFYGYKLFN PNSYF DSGPRELFV I I LPVIGIGIYPDFVLSLS DK EAI+SN+F Sbjct: 262 VRINMELLPHAHSIFSPWLMIVGTIQVIYAASTSPGQRNLKKRIAYSSVSHMAFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLIYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAESIVFFGIITSPKYFFMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNVPNSYFVDSGPRELFVSICIFLPVIGIGIYPDFVLSLSVDKVEAILSNYF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_LACSA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Lactuca sativa GN=ndhD PE=3 SV=1) HSP 1 Score: 413.305 bits (1061), Expect = 6.978e-115 Identity = 205/237 (86.50%), Postives = 219/237 (92.41%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 IRINMELLPHAHSIFSPW MIVGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGFI++GI SITDTGLNGA+LQIISHG I AALFFLAGTSYDRIR YLD+MGG+AIP+PKIFT+FS SMASLALPGMSGFVAE+IVF GIITSQK+ LMPKI ITFVMAIGMILTPIYSLSMLRQMFYGYKLFN PN+Y FDSGPRELFV ISI LPVIGIG+YPDFVLSLS DK E I+SN+F Sbjct: 262 IRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFILIGIASITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDQMGGVAIPMPKIFTMFSSFSMASLALPGMSGFVAEVIVFLGIITSQKYLLMPKIAITFVMAIGMILTPIYSLSMLRQMFYGYKLFNTPNAYVFDSGPRELFVSISIFLPVIGIGMYPDFVLSLSVDKVEGILSNYF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_CUCSA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Cucumis sativus GN=ndhD PE=2 SV=2) HSP 1 Score: 412.92 bits (1060), Expect = 9.113e-115 Identity = 208/237 (87.76%), Postives = 220/237 (92.83%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 +RINMELLPHAHSIFSPW +IVG +QIIYAASTS GQRNLKKRIAYSSVSHMGFII+GIGSI+DTGLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGGLAIPIPKIFT FSILSMASLALPGMSGFVAELIVFFGIITSQK+ LM K+VIT VMAIG+ILTPIY LSMLRQMFYGYKLFNA NSYFFDSGPRELFV ISIL+PVIGIGIYPDFV SLS DK EAI+SN+F Sbjct: 262 VRINMELLPHAHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGMSGFVAELIVFFGIITSQKYLLMTKMVITLVMAIGIILTPIYLLSMLRQMFYGYKLFNAKNSYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVEAILSNYF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_BUXMI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Buxus microphylla GN=ndhD PE=3 SV=2) HSP 1 Score: 412.92 bits (1060), Expect = 9.113e-115 Identity = 208/237 (87.76%), Postives = 220/237 (92.83%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 IRINMELLPHAHSIFSPW +IVGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGFII+GIGSITD GLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AI +PKIFT+FS SMASLALPGMSGFVAELIVFFGIITSQK+FLMPKI+ITFVMAIGMILTPIYSLSM RQMFYGYKLFN NS+F DSGPRELFV ISI LPVIGIGIYPDFVLSLS DK EAI+SN+F Sbjct: 263 IRINMELLPHAHSIFSPWLVIVGTMQIIYAASTSPGQRNLKKRIAYSSVSHMGFIIIGIGSITDAGLNGAILQIISHGFIGAALFFLAGTSYDRIRLIYLDEMGGIAIQMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSQKYFLMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNTTNSFFSDSGPRELFVSISIFLPVIGIGIYPDFVLSLSVDKVEAILSNYF 499 The following BLAST results are available for this feature:
BLAST of CV712684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 325
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712684 ID=CV712684; Name=CV712684; organism=Citrus sinensis; type=EST; length=746bpback to top |