CV712667

Overview
NameCV712667
Unique NameCV712667
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712667 vs. ExPASy Swiss-Prot
Match: BEM46_SCHPO (Protein bem46 OS=Schizosaccharomyces pombe GN=bem46 PE=2 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 3.954e-24
Identity = 69/159 (43.40%), Postives = 96/159 (60.38%), Query Frame = 1
Query:   16 EHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILNFLVRSPWSTIDVVGEIKQ-PILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAEH 489
            E+L +      T+IVV+G+S+GGAV   LT  N D+++ALILENTFTSI DM   + P+     GGS      I++      WS+ D + +IK+ P+LFLSG +DE+VPP  M +L+    +  K  KF  FP   H DT L  GD Y++ I +FLAE+
Sbjct:  149 EYLMEHPICSKTKIVVYGQSIGGAVAIALTAKNQDRISALILENTFTSIKDMIPTVFPY-----GGS------IISRFCTEIWSSQDEIRKIKKLPVLFLSGEKDEIVPPPQMVLLFGLCGSAKK--KFHSFPKCTHNDTCL--GDGYFQVIADFLAEN 292          
BLAST of CV712667 vs. ExPASy Swiss-Prot
Match: ABHDD_DANRE (Abhydrolase domain-containing protein 13 OS=Danio rerio GN=abhd13 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.091e-21
Identity = 61/169 (36.09%), Postives = 94/169 (55.62%), Query Frame = 1
Query:   16 EHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILN-FLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAEHVRKKKESETS 519
            +++  R DID T++V+FGRSLGGAV   L   NP +VAA+++ENTF SI  MA  L  F             R L  +  ++ + +   V   + P LF+SGL D+++PP  M+ LY  + +R K  +   FP G H DTW   G  Y+ ++++F+ E ++     ET+
Sbjct:  174 DYVMTRPDIDKTKVVLFGRSLGGAVAIRLASCNPHRVAAIMVENTFLSIPHMAATLFSFFPM----------RYLPLWCYKNKFLSYRHVVPCRMPSLFISGLSDQLIPPVMMKQLYELSPSRTK--RLAIFPEGTHNDTWQCQG--YFSALEQFMKELLKSHAREETT 328          
BLAST of CV712667 vs. ExPASy Swiss-Prot
Match: ABHDD_CHICK (Abhydrolase domain-containing protein 13 OS=Gallus gallus GN=ABHD13 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.030e-20
Identity = 59/174 (33.91%), Postives = 95/174 (54.60%), Query Frame = 1
Query:   16 EHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILN-FLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAEHVRKKKESE---TSGN 525
            +++  R+D+D T+I +FGRSLGGAV   L   N  +++A+++ENTF SI  MA  L  F             R L  +  ++ + +   + + + P LF+SGL D+++PP  M+ LY  + AR K  +   FP G H DTW   G  Y+ ++++F+ E ++     E   TS N
Sbjct:  174 DYVMTRSDLDKTKIFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPM----------RYLPLWCYKNKFLSYRKISQCRMPSLFISGLSDQLIPPVMMKQLYELSPARTK--RLAIFPDGTHNDTWQCQG--YFTALEQFIKEVIKSHSSEEMAKTSSN 333          
BLAST of CV712667 vs. ExPASy Swiss-Prot
Match: ABHDD_HUMAN (Abhydrolase domain-containing protein 13 OS=Homo sapiens GN=ABHD13 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.716e-20
Identity = 59/174 (33.91%), Postives = 94/174 (54.02%), Query Frame = 1
Query:   16 EHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILN-FLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAEHVRKKKESE---TSGN 525
            +++  R D+D T+I +FGRSLGGAV   L   N  +++A+++ENTF SI  MA  L  F             R L  +  ++ + +   + + + P LF+SGL D+++PP  M+ LY  + +R K  +   FP G H DTW   G  Y+ ++++F+ E V+     E   TS N
Sbjct:  174 DYVMTRPDLDKTKIFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPM----------RYLPLWCYKNKFLSYRKISQCRMPSLFISGLSDQLIPPVMMKQLYELSPSRTK--RLAIFPDGTHNDTWQCQG--YFTALEQFIKEVVKSHSPEEMAKTSSN 333          
BLAST of CV712667 vs. ExPASy Swiss-Prot
Match: ABHDD_XENLA (Abhydrolase domain-containing protein 13 OS=Xenopus laevis GN=abhd13 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.008e-19
Identity = 57/158 (36.08%), Postives = 88/158 (55.70%), Query Frame = 1
Query:   16 EHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILN-FLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAE 486
            +++  R DID T+I++FGRSLGGAV   L   N  ++ AL+LENTF SI  MA  L   L            R L  +  ++ + +   + + + P LF+SGL D+++PP  M+ LY  + +R K  +   FP G H DTW   G  Y+ ++++F+ E
Sbjct:  174 DYVMTRPDIDKTKIILFGRSLGGAVAIHLASENAHRICALVLENTFLSIPHMASTLFSVLPM----------RYLPLWCYKNKFLSYRKIVQCRMPSLFISGLSDQLIPPFMMKQLYELSPSRTK--RLAIFPDGTHNDTWQCQG--YFTALEQFIKE 317          
BLAST of CV712667 vs. ExPASy Swiss-Prot
Match: ABHDD_MOUSE (Abhydrolase domain-containing protein 13 OS=Mus musculus GN=Abhd13 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.932e-19
Identity = 56/174 (32.18%), Postives = 96/174 (55.17%), Query Frame = 1
Query:   16 EHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILN-FLVRSPWSTIDVVGEIKQPILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAEHVRK---KKESETSGN 525
            +++  R D+D T++ +FGRSLGGAV   L   N  +++A+++ENTF SI  MA  L  F             R L  +  ++ + +   + + + P LF+SGL D+++PP  M+ LY  + +R K  +   FP G H DTW   G  Y+ ++++F+ E ++    +  ++TS N
Sbjct:  174 DYVMTRPDLDKTKVFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPM----------RYLPLWCYKNKFLSYRKISQCRMPSLFISGLSDQLIPPVMMKQLYELSPSRTK--RLAIFPDGTHNDTWQCQG--YFTALEQFIKEVIKSHSPEDMTKTSSN 333          
BLAST of CV712667 vs. ExPASy Swiss-Prot
Match: YN60_YEAST (Uncharacterized membrane protein YNL320W OS=Saccharomyces cerevisiae GN=YNL320W PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.900e-18
Identity = 60/158 (37.97%), Postives = 81/158 (51.27%), Query Frame = 1
Query:   19 HLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWFIGGSGSKGPRILNFLVRSPWSTIDVVGEI--KQPILFLSGLQDEMVPPSHMQMLYAKAAARNKHCKFVEFPTGMHMDTWLAGGDQYWRSIQEFLAE 486
            HLS  +     ++V++GRSLGGA    +     D    +ILENTF SI  +   + P LK F              L    W++  ++G    + P LFLSGL+DE+VPP HM+ LY    + NK  K  EFP G H DT +  G  YW  I++FL E
Sbjct:  139 HLSTDSFHSKRKLVLYGRSLGGANALYIASKFRDLCDGVILENTFLSIRKVIPYIFPLLKRF------------TLLCHEIWNSEGLMGSCSSETPFLFLSGLKDEIVPPFHMRKLYETCPSSNK--KIFEFPLGSHNDTIIQDG--YWDIIRDFLIE 280          
The following BLAST results are available for this feature:
BLAST of CV712667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
BEM46_SCHPO3.954e-2443.40Protein bem46 OS=Schizosaccharomyces pombe GN=bem4... [more]
ABHDD_DANRE4.091e-2136.09Abhydrolase domain-containing protein 13 OS=Danio ... [more]
ABHDD_CHICK2.030e-2033.91Abhydrolase domain-containing protein 13 OS=Gallus... [more]
ABHDD_HUMAN7.716e-2033.91Abhydrolase domain-containing protein 13 OS=Homo s... [more]
ABHDD_XENLA1.008e-1936.08Abhydrolase domain-containing protein 13 OS=Xenopu... [more]
ABHDD_MOUSE2.932e-1932.18Abhydrolase domain-containing protein 13 OS=Mus mu... [more]
YN60_YEAST1.900e-1837.97Uncharacterized membrane protein YNL320W OS=Saccha... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L17_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712667 ID=CV712667; Name=CV712667; organism=Citrus sinensis; type=EST; length=825bp
CTCAGGCAGCATTGGGAGCATCTTTCTCAAAGGACCGATATAGACACGAC
TAGAATAGTTGTATTTGGGAGATCACTAGGAGGTGCCGTTGGAGCTGTGC
TTACTAAGAATAATCCGGATAAGGTCGCTGCACTGATACTGGAGAATACT
TTCACATCAATACTGGACATGGCTGGAGTTCTTCTGCCATTCCTGAAGTG
GTTTATTGGGGGCAGTGGTTCAAAAGGTCCAAGAATTCTTAATTTTCTTG
TACGCTCTCCTTGGAGTACAATTGATGTTGTTGGTGAGATTAAGCAGCCA
ATCCTTTTTCTCTCTGGGTTGCAAGATGAGATGGTTCCTCCATCACACAT
GCAAATGCTGTATGCTAAAGCAGCTGCTCGTAACAAGCATTGCAAATTTG
TGGAATTTCCTACTGGCATGCATATGGATACTTGGTTGGCTGGTGGTGAT
CAGTATTGGAGATCAATTCAGGAGTTCCTGGCAGAACATGTTAGAAAGAA
AAAGGAAAGTGAAACGTCAGGCAATGACAATGATTCCGAGGGGAGGTGAC
TGGTGTTGACATGCAAACTATTGGGTTTTATTGATTGTCTCACACAAGGA
TCTCAAACAATTTCTGCCTTTTTCATTTCTGAGGTTGCATCAGTTATGAG
CTTACAATGAGGAGTTGCTGCCAGCTGAGACCTGATGAATCCATTCAGAT
TTTCTCTTGGAAGAGTTATTGTTAGATTGACAGACTTCAGTAGACACCAA
AACAATTTGAATGCCCTTGGGTACACTGTATGACTTTGATCACATTCGTT
AAGTACCTAATGAATTCTGACATAT
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