CV712635

Overview
NameCV712635
Unique NameCV712635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:67..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712635 vs. ExPASy Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 8.698e-117
Identity = 213/222 (95.95%), Postives = 219/222 (98.65%), Query Frame = 3
Query:    3 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNCVSPAAKKSLAERISALLNVTSDKMK 668
            MNPSPSVTELQVENVTFTPS+QPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLE++AVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENC+AIWKFFGIYTDAEAKAIEKFT VFKDEIFPPGSSILFTQS GSLTISFSKDGSIPKDGVAVIE+NLLSEAVLESMIGKN VSPAAKKSLAER+SALLNVTSDKMK
Sbjct:    1 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDKMK 222          
BLAST of CV712635 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 6.080e-86
Identity = 164/216 (75.93%), Postives = 185/216 (85.65%), Query Frame = 3
Query:    3 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNCVSPAAKKSLAERISALLN 647
            M+ S SVTELQVEN TF P+++PPGSTK+ FLGGAGERGLEI+GKF+KFTAIGVYLE++AV  L  KWKGK+A ELTESVEFFRDVVTG FEKF++VTMILPLTG QYSEKV+ENC+AIWK  GIYTDAEAKAIEKF  VFKDE FPPGSSILFT S  GSLTI FSKD S+P+ G  VIEN LL+ +VLES+IGKN VSPAAK+SLA R+S L N
Sbjct:    1 MSTSLSVTELQVENFTFPPTVKPPGSTKTLFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQGSLTIGFSKDSSVPEGGKVVIENKLLANSVLESVIGKNGVSPAAKESLASRLSPLFN 216          
BLAST of CV712635 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 5.147e-85
Identity = 161/216 (74.54%), Postives = 183/216 (84.72%), Query Frame = 3
Query:    3 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNCVSPAAKKSLAERISALLN 647
            M P PS+  LQVE   F PS++PPGS+ + FLGGAG RGLEI+G FVKFTAIGVYLE+NAVPLLA KWKGKTAEEL+ESVEFFRD+VTGPFEKF++VT ILPLTG QYSEKV+ENC+A WK  GIYTDAE KAIEKF  VFKD+ FPPG+SILFTQS  GSLTI FSKD S+P+   AVIEN LLSEAVLES++GK+ VSPAAK+SLA R+S LLN
Sbjct:    1 MAPPPSLAGLQVEATAFPPSVKPPGSSNTLFLGGAGVRGLEIQGNFVKFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTGQQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQNFPPGASILFTQSPKGSLTICFSKDASVPEAANAVIENKLLSEAVLESILGKHGVSPAAKRSLAARLSELLN 216          
BLAST of CV712635 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 8.779e-85
Identity = 161/214 (75.23%), Postives = 181/214 (84.58%), Query Frame = 3
Query:    3 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNCVSPAAKKSLAERISAL 641
            M+P PSVT +QVENV F PS++PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE +AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF  V KDE FPPG+SILFT S  G+LT+SFSKDGS+P+ G AVIEN LL+EAVLES+IGK+ VSP AKKSLA R+S L
Sbjct:    1 MSPVPSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CV712635 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 312.768 bits (800), Expect = 1.498e-84
Identity = 156/212 (73.58%), Postives = 183/212 (86.32%), Query Frame = 3
Query:   12 SPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNCVSPAAKKSLAERISALL 644
            SPSV ++Q+E+  F P+++PPG++K  FLGGAGERGLEI+GKF+KFTAIGVYLE++A+P LA KWKGKTAEELT+SV+FFRD+V+GPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAEAKAIEKF  VFKDE FPPG SILFTQS  GSLTI+FSKDGS+P+ G  V+EN  LSEAVLES+IGK+ VSPAAKKSLA R+S LL
Sbjct:    6 SPSVAQVQIESHVFPPTVKPPGTSKPFFLGGAGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILFTQSPLGSLTIAFSKDGSLPETGTVVMENKQLSEAVLESIIGKHGVSPAAKKSLAARMSELL 217          
BLAST of CV712635 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 7.432e-84
Identity = 160/214 (74.77%), Postives = 180/214 (84.11%), Query Frame = 3
Query:    3 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNCVSPAAKKSLAERISAL 641
            M+  PSVT +QVENV F PS++PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE +AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF  V KDE FPPG+SILFT S  G+LT+SFSKDGS+P+ G AVIEN LL+EAVLES+IGK+ VSP AKKSLA R+S L
Sbjct:    1 MSQVPSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CV712635 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 6.292e-83
Identity = 157/210 (74.76%), Postives = 180/210 (85.71%), Query Frame = 3
Query:   18 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNCVSPAAKKSLAERISALL 644
            SVT +Q+  ++F PS++PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLE+ AVP LA KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF  VFKD+ FPPG+SILFTQS  GSLTI FSKDG IP+ G AVIEN LLSE+VLES+IGK  VSP A+KS+A R+S LL
Sbjct:    4 SVTGIQIGGMSFPPSVKPPGSGNTFFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPDGSLTIGFSKDGCIPEVGNAVIENKLLSESVLESIIGKPGVSPEARKSVATRLSELL 213          
BLAST of CV712635 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 2.391e-82
Identity = 155/214 (72.43%), Postives = 183/214 (85.51%), Query Frame = 3
Query:   18 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNCVSPAAKKSLAERISALLNVTS 656
            SVTE+QVE+V F P ++PPGS+K+ FLGGAG RG+EI+GKF+KFTAIGVYLE+NAVP LA KWKGK+A+ELTESVEFFRD+VTGP EKF +VT ILPLTG QYSEKV+ENC+A WK  GIY+DAEAKAIEKF  +FKD+ FPP +S LFTQS  GSLT+SFSKDGSIP+ G AV+EN LLSEAVLES+IGK+ VSP AK++LA R+  LLN  S
Sbjct:    7 SVTEVQVESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQTFPPAASNLFTQSPLGSLTMSFSKDGSIPEVGNAVLENKLLSEAVLESIIGKHGVSPEAKQNLATRLVQLLNENS 220          
BLAST of CV712635 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.024e-81
Identity = 154/210 (73.33%), Postives = 179/210 (85.24%), Query Frame = 3
Query:   18 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNCVSPAAKKSLAERISALL 644
            SVT +Q+   +F P+++PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLE+ AVP L+ KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF  VFKD+ FPPG+SILFTQS +GSL I  SKDGSIP+ G AVIEN LLSE+VLES+IGK  VSP A+KS+A R+S LL
Sbjct:    4 SVTGIQIGGTSFPPAVKPPGSGNTLFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPNGSLMIGISKDGSIPEVGNAVIENKLLSESVLESIIGKQGVSPEARKSVATRLSELL 213          
BLAST of CV712635 vs. ExPASy Swiss-Prot
Match: CFI2_LOTJA (Chalcone--flavonone isomerase 2 OS=Lotus japonicus GN=CHI2 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.713e-80
Identity = 155/211 (73.46%), Postives = 176/211 (83.41%), Query Frame = 3
Query:   15 PSVTELQVENVTFTPSL-QPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFT-QSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNCVSPAAKKSLAERISAL 641
            PSVT LQVENV F P+L +PP S  + FLGGAGERGL I+ KFVKFTAIG+YL++ AVP LA KWKGK  +ELTESV+FFRD+VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIYTD E KAI+KF +VFKD+ FPPGSSILFT    GSL ISFSKDGSIP+   AVI+N LLSEAVLESMIG + VSPAAK+SLA R+S L
Sbjct:    4 PSVTALQVENVAFPPTLIKPPASANTLFLGGAGERGLHIQDKFVKFTAIGIYLQDTAVPSLAVKWKGKPVDELTESVQFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKHLGIYTDEEGKAIDKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMIGAHGVSPAAKQSLASRLSEL 214          
The following BLAST results are available for this feature:
BLAST of CV712635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CITSI8.698e-11795.95Chalcone--flavonone isomerase OS=Citrus sinensis G... [more]
CFI_GOSHI6.080e-8675.93Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI_PYRCO5.147e-8574.54Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI2_VITVI8.779e-8575.23Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI_CAMSI1.498e-8473.58Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI1_VITVI7.432e-8474.77Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]
CFI1_FRAAN6.292e-8374.76Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]
CFI_ELAUM2.391e-8272.43Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI2_FRAAN2.024e-8173.33Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CFI2_LOTJA1.713e-8073.46Chalcone--flavonone isomerase 2 OS=Lotus japonicus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001K21_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001K21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712635 ID=CV712635; Name=CV712635; organism=Citrus sinensis; type=EST; length=820bp
CGATGAATCCCTCACCGTCCGTCACCGAACTGCAGGTCGAGAACGTCACT
TTCACGCCGTCCCTGCAACCTCCAGGATCAACAAAGTCGCATTTCCTCGG
CGGCGCAGGGGAGAGAGGATTGGAGATTGAAGGGAAGTTCGTGAAGTTCA
CGGCGATAGGAGTGTACTTGGAGGAGAACGCCGTGCCGTTACTCGCCGGC
AAATGGAAGGGGAAGACTGCGGAGGAGTTGACGGAATCCGTTGAGTTCTT
CAGAGACGTCGTCACAGGTCCCTTTGAGAAATTCATGAAGGTGACAATGA
TCTTGCCATTAACTGGTGCACAATACTCAGAGAAGGTTGCCGAAAATTGC
ATGGCCATATGGAAGTTTTTTGGAATTTACACAGATGCTGAAGCCAAAGC
TATTGAAAAATTCACTGCGGTCTTCAAGGATGAAATTTTCCCACCAGGAT
CCTCAATCCTCTTTACTCAATCATCAGGATCATTGACTATCAGCTTCTCC
AAAGACGGTTCAATACCGAAAGATGGTGTTGCGGTAATAGAGAATAATCT
GCTTTCTGAGGCAGTACTGGAGTCGATGATCGGCAAGAATTGTGTTTCTC
CTGCAGCAAAGAAGAGTTTGGCTGAAAGAATATCAGCACTGTTGAATGTA
ACTAGTGATAAGATGAAATGAAGAAGTTGAAAAGTTTGCCAAATAATAAG
CGAAGGCAGAGTTGTTAAATTGGCAAACTTTTTTTTCTTTAATGTTAAAT
TAGTGTCCTTTCCTATGGACTCTCAGTTGTGTTGCCTTTGTGAGAGCTAG
AGCTCCCAAATTCTGAGCCT
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