CV712507

Overview
NameCV712507
Unique NameCV712507
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV712507 vs. ExPASy Swiss-Prot
Match: AGOL_ARATH (Argonaute-like protein At2g27880 OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.521e-15
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = -1 
Query:  178 VVASMYWLEVIKYRGVVSAQAHHEEII*DLYKSIQDPQKGLVHGGIIREH 327
            VVASM W E+ KYRG+VSAQAH EEII DLYK +QDPQ+GLVH G+IREH
Sbjct:  738 VVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLIREH 787
[Close]
BLAST of CV712507 vs. ExPASy Swiss-Prot
Match: AGO1C_ORYSJ (Protein argonaute 1C OS=Oryza sativa subsp. japonica GN=AGO1C PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11
Identity = 33/49 (67.35%), Postives = 38/49 (77.55%), Query Frame = -1 
Query:  181 VVASMYWLEVIKYRGVVSAQAHHEEII*DLYKSIQDPQKGLVHGGIIRE 327
            VVAS  W EV KY G+VSAQAH +E+I DLYK  QDPQ+G V GG+IRE
Sbjct:  739 VVASQDWPEVTKYAGLVSAQAHRQELIEDLYKIWQDPQRGTVSGGMIRE 787
The following BLAST results are available for this feature:
BLAST of CV712507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AGOL_ARATH6.521e-1576.00Argonaute-like protein At2g27880 OS=Arabidopsis th... [more]
AGO1C_ORYSJ9.744e-1167.35Protein argonaute 1C OS=Oryza sativa subsp. japoni... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0001H20_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712507 ID=CV712507; Name=CV712507; organism=Citrus sinensis; type=EST; length=657bp
TGTAAGTAATGCAAATAAAAGTGAGGTGTGGGGGCAGACTATATTTACGT
CATGTATTAATAGAAATGAAAACAATTATTCCCAAATAAAGTCACTTAGT
TCAATGGATAGGCGTAAGTTGAACAAGCCATTTTTTGTTGTTACTTAATG
ATTGTAGTAAGCTGATGGCAGTAGATCATGCTCCCTGATTATTCCTCCAT
GAACTAAACCTTTCTGAGGATCTTGAATAGATTTATAGAGATCTCAGATA
ATTTCCTCATGGTGCGCCTGAGCAGAGACAACTCCTCTGTACTTGATTAC
TTCTAGCCAATACATCGAGGCCACCACCTCGGTTTAGCCCAGCACTTTCA
ACAGCTTCATTAAACTATTCACTTGAGCCTTTGCAGTTGTTCCCATTTCG
TTTGAAAAGACTGCCACCATTTTGTGCATTTCTTTTTCCAACTTTTGATA
TAAATTGCTCATGAAGTCATCTTCCTCTTAATACTGTATGACAATGAACT
ACCACCATCCAAAGAGTTCAAAAAACAAATGAATAAGCAAAAGAATTTAA
GAAATATTAACCACTGAACAGTTGCCTTAGATTATAGTCTGTACCAGACA
GATAAATCTTCGTCTTAGCCGAGACCAACCTCTTATATCATATTTAAGCA
TGACCCT
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