CV712481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_CITSI (Cytochrome c biogenesis protein ccsA OS=Citrus sinensis GN=ccsA PE=3 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 1.241e-90 Identity = 166/190 (87.37%), Postives = 166/190 (87.37%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGY LVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLIFLSWSLSIIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYAALLCGSLLSTALLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_MANES (Cytochrome c biogenesis protein ccsA OS=Manihot esculenta GN=ccsA PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 3.403e-64 Identity = 128/192 (66.67%), Postives = 140/192 (72.92%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLN--SLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 H PLSDLYE IH + FK ++N LSAITAPS FFTQGFATSG LT MHQS ILVPALQ QWLMMHVSMM+LGY LVITFRK+IR+F K N +N SF FSEIQYM E+KNV N LS+RNYYR+Q+IQQLD W YRIIS+GFIFLT GILSGAVWANEAWGSYWNW Sbjct: 65 HLPLSDLYESLIFLSWSFSIIHMVPYFKKHKNFLSAITAPSTFFTQGFATSGLLTDMHQSEILVPALQSQWLMMHVSMMILGYAALLCGSLFSVAFLVITFRKIIRIFDKSNNL--LNNSFFFSEIQYMAERKNVLRNISFLSSRNYYRFQLIQQLDDWGYRIISIGFIFLTIGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_GOSHI (Cytochrome c biogenesis protein ccsA OS=Gossypium hirsutum GN=ccsA PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.293e-63 Identity = 128/194 (65.98%), Postives = 140/194 (72.16%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKI--FDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH + FK +N+LSAITAPSA FTQGFATSG LTKMHQS IL PALQ QWLMMHVSMMVLGY LVITFRK I++ + NF SF F +IQYMNE+ NV LN+ LS++NYYRYQ+ QQLDRWSYRIISLGFIFLT GILSGAVWANEAWGSYWNW Sbjct: 67 HFPLSDLYESLIFLSWGFSLIHMVSYLKFKKRKNNLSAITAPSAIFTQGFATSGLLTKMHQSAILAPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKAIKIIGENNNF-----SFSFGKIQYMNERSNVLLNTYFLSSKNYYRYQLTQQLDRWSYRIISLGFIFLTIGILSGAVWANEAWGSYWNW 255
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_EUCGG (Cytochrome c biogenesis protein ccsA OS=Eucalyptus globulus subsp. globulus GN=ccsA PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.293e-63 Identity = 125/192 (65.10%), Postives = 141/192 (73.44%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH + FK ++N+LS ITAPS FTQGFATSG LT+MHQS I+VPALQ QWLMMHVSMM+LGY LVIT RK IR+F K+ NF +N SF F EIQYMNE+ NV L + S+RNYYR Q+IQQLD+WSYRIISLGF+FLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLIFLSWSFSVIHMVPYFKKHKNYLSTITAPSTIFTQGFATSGLLTEMHQSEIVVPALQSQWLMMHVSMMILGYAALLCGSLLSVALLVITLRKAIRVFSKKNNF--LNESFSFVEIQYMNERSNVLLTTSFCSSRNYYRAQLIQQLDQWSYRIISLGFLFLTIGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_VITVI (Cytochrome c biogenesis protein ccsA OS=Vitis vinifera GN=ccsA PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 3.763e-63 Identity = 126/192 (65.62%), Postives = 139/192 (72.40%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH + FK ++NHLSA+TAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVLGY LVITFR+ IR+ K +F +N SF F EIQYMN+ NV N+ LS RNYYR Q IQQLD WSYR+ISLGF+FLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLIFLSWSFSIIHIVPYFKKHKNHLSALTAPSAIFTQGFATSGLLTEMHQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRQDIRILCKNNHF--LNKSFSFDEIQYMNKGNNVLQNTSFLSVRNYYRAQFIQQLDHWSYRVISLGFLFLTIGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_GOSBA (Cytochrome c biogenesis protein ccsA OS=Gossypium barbadense GN=ccsA PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 4.914e-63 Identity = 127/194 (65.46%), Postives = 139/194 (71.65%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKI--FDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH + FK +N+LSAITAP A FTQGFATSG LTKMHQS IL PALQ QWLMMHVSMMVLGY LVITFRK I++ + NF SF F +IQYMNE+ NV LN+ LS++NYYRYQ+ QQLDRWSYRIISLGFIFLT GILSGAVWANEAWGSYWNW Sbjct: 67 HFPLSDLYESLIFLSWGFSLIHMVSYLKFKKRKNNLSAITAPRAIFTQGFATSGLLTKMHQSAILAPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKAIKIIGENNNF-----SFSFGKIQYMNERSNVLLNTYFLSSKNYYRYQLTQQLDRWSYRIISLGFIFLTIGILSGAVWANEAWGSYWNW 255
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_CARPA (Cytochrome c biogenesis protein ccsA OS=Carica papaya GN=ccsA PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 6.418e-63 Identity = 128/193 (66.32%), Postives = 142/193 (73.58%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLS+LYE IH + F K ++N+L+AIT PSA TQGFATSG L KM QS ILVPALQ QWLMMHVSMMVLGY LVITFRKVIR+F K NF +N SF F +IQYMNE+ N+ LN+ LS+RNYYRYQ+IQQLD WSYRIISLGFIFLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSNLYESLIFLSWSFSIIHMVCYFNKKHKNNLNAITGPSAILTQGFATSGLLNKMSQSVILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKVIRIFGKSNNF--LNESFSFGKIQYMNERSNILLNTSFLSSRNYYRYQLIQQLDHWSYRIISLGFIFLTIGILSGAVWANEAWGSYWNW 255
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_PLAOC (Cytochrome c biogenesis protein ccsA OS=Platanus occidentalis GN=ccsA PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 7.096e-62 Identity = 124/192 (64.58%), Postives = 140/192 (72.92%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH + +N++NHLSAITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVL Y LVI FRK I +F K N++ + GSF F E QY+NE+ N+ N+ LS RNYYRYQ+IQQLD WSYR+ISLGFIFLT GILSGAVWANEAWG+YWNW Sbjct: 65 HFPLSDLYESLIFLSWSFSIIHMVPKIRNHKNHLSAITAPSAIFTQGFATSGLLTEMHQSAILVPALQSQWLMMHVSMMVLSYAALLCGSLLSIALLVIRFRKNIEIFGK-DNYLLI-GSFSFGESQYVNERSNILRNTSFLSFRNYYRYQLIQQLDHWSYRVISLGFIFLTIGILSGAVWANEAWGAYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_BUXMI (Cytochrome c biogenesis protein ccsA OS=Buxus microphylla GN=ccsA PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 3.522e-61 Identity = 125/192 (65.10%), Postives = 137/192 (71.35%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLN--SLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 H PLS+LYE IH I FKN++NHLS +TAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVL Y LVITFRK I +F KR + + GSF F EIQY NE+ NV N LS RNY RYQ+I+QLD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNW Sbjct: 65 HLPLSNLYESLIFLSWSFSIIHMIPYFKNHKNHLSLVTAPSAIFTQGFATSGLLTEMHQSAILVPALQSQWLMMHVSMMVLSYGALLCGSLLSVALLVITFRKNIDIFGKRNHL--LIGSFSFGEIQYTNERSNVLRNVSFLSLRNYRRYQLIRQLDNWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_MORIN (Cytochrome c biogenesis protein ccsA OS=Morus indica GN=ccsA PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 6.007e-61 Identity = 124/192 (64.58%), Postives = 137/192 (71.35%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 + PLS+LYE IH + FK +N+L AITAPSA FTQGFATSG LT+MHQS ILVPALQ WLMMHVSMMVLGY LVITFRK I +F K NF VN SF EIQY+ EK N+ N+ LS+RNYYR+Q+IQQLD WSYRIISLGFIFLT GILSGAVWANEAWGSYWNW Sbjct: 65 YLPLSNLYESLIFLSWSFSIIHMVPYFKKYKNYLKAITAPSAIFTQGFATSGLLTEMHQSEILVPALQSHWLMMHVSMMVLGYAALLCGSLLSLALLVITFRKFISIFSKSNNF--VNESFSLGEIQYVREKNNLLPNTSFLSSRNYYRFQLIQQLDLWSYRIISLGFIFLTIGILSGAVWANEAWGSYWNW 254 The following BLAST results are available for this feature:
BLAST of CV712481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 132
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712481 ID=CV712481; Name=CV712481; organism=Citrus sinensis; type=EST; length=571bpback to top |