CV712439

Overview
NameCV712439
Unique NameCV712439
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length271
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3714 contig Csv1_Contig3714:621..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712439 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.685e-37
Identity = 69/89 (77.53%), Postives = 83/89 (93.26%), Query Frame = 3
Query:    3 IPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEG 269
            IPWG +GV+YVVES+GVFTT  KASAH+KGGAKKV+ISAPSADAPMFV+GVNEKTY P++N++SNASCTTNCLAPLAKV+++ FG+ EG
Sbjct:   84 IPWGKHGVEYVVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNEKTYDPSVNVLSNASCTTNCLAPLAKVINDNFGLTEG 172          
BLAST of CV712439 vs. ExPASy Swiss-Prot
Match: G3P_PARBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=GPD PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 7.992e-37
Identity = 68/89 (76.40%), Postives = 82/89 (92.13%), Query Frame = 3
Query:    3 IPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEG 269
            IPWG +GVDYVVES+GVFTT  KA AH+ GGAKKV+ISAPSADAPMFV+GVNEK+Y+P+++++SNASCTTNCLAPLAKV+H+ FGI EG
Sbjct:   85 IPWGKHGVDYVVESTGVFTTTEKAKAHLSGGAKKVIISAPSADAPMFVMGVNEKSYRPDISVLSNASCTTNCLAPLAKVIHDNFGIAEG 173          
BLAST of CV712439 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.507e-35
Identity = 68/89 (76.40%), Postives = 77/89 (86.52%), Query Frame = 3
Query:    3 IPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEG 269
            IPWG  G DYVVES+GVFTTI KAS H+KGGAKKV+ISAPSADAPMFV GVN + YKP   ++SNASCTTNCLAPLAKV+H+ FGI+EG
Sbjct:   84 IPWGKAGADYVVESTGVFTTIEKASLHLKGGAKKVIISAPSADAPMFVCGVNLEAYKPEYEVISNASCTTNCLAPLAKVIHDNFGIVEG 172          
BLAST of CV712439 vs. ExPASy Swiss-Prot
Match: G3PC_CRAPL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Craterostigma plantagineum GN=GAPC PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.571e-35
Identity = 67/89 (75.28%), Postives = 80/89 (89.89%), Query Frame = 3
Query:    3 IPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEG 269
            IPW + G +YVVES+GVFT   KA+AH+KGGAKKV+ISAPS DAPMFVVGVNEKTY P++++VSNASCTTNCLAPLAKV+H+ FGI+EG
Sbjct:   87 IPWAETGAEYVVESTGVFTEKEKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEKTYTPDIDVVSNASCTTNCLAPLAKVIHDRFGIVEG 175          
BLAST of CV712439 vs. ExPASy Swiss-Prot
Match: G3PE_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 OS=Zea mays GN=GAPC3 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.385e-35
Identity = 69/89 (77.53%), Postives = 80/89 (89.89%), Query Frame = 3
Query:    3 IPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEG 269
            IPWG  G +YVVES+GVFT   KA+AH+KGGAKKVVISAPS DAPMFVVGVNEK YK ++NIVSNASCTTNCLAPLAKV++++FGI+EG
Sbjct:   87 IPWGSVGAEYVVESTGVFTDQEKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKSDINIVSNASCTTNCLAPLAKVINDKFGIVEG 175          
BLAST of CV712439 vs. ExPASy Swiss-Prot
Match: G3PC_PETHY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida GN=GAPC PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.276e-34
Identity = 67/89 (75.28%), Postives = 79/89 (88.76%), Query Frame = 3
Query:    3 IPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEG 269
            IPWG+ G DYVVES+GVFT   KA+AH+KGGAKKV+ISAPS DAPMFVVGVNEK YK ++ +VSNASCTTNCLAPLAKV+++ FGI+EG
Sbjct:   87 IPWGEAGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEKEYKSDLTVVSNASCTTNCLAPLAKVINDRFGIVEG 175          
BLAST of CV712439 vs. ExPASy Swiss-Prot
Match: G3PC_DIACA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.276e-34
Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 3
Query:    3 IPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEG 269
            IPWG  G DYVVES+GVFT   KA+AH+KGGAKKV+ISAPS DAPMFVVGVNE  YKP ++IVSNASCTTNCLAPLAKV+++ FGI+EG
Sbjct:   87 IPWGGTGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPELDIVSNASCTTNCLAPLAKVINDRFGIVEG 175          
BLAST of CV712439 vs. ExPASy Swiss-Prot
Match: G3P_EMENI (Glyceraldehyde-3-phosphate dehydrogenase OS=Emericella nidulans GN=gpdA PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 1.666e-34
Identity = 66/89 (74.16%), Postives = 80/89 (89.89%), Query Frame = 3
Query:    3 IPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEG 269
            IPWG  G +Y+VES+GVFTT  KASAH+KGGAKKVVISAPSADAPMFV+GVN +TYK ++ ++SNASCTTNCLAPLAKV+++ FGI+EG
Sbjct:   84 IPWGQDGAEYIVESTGVFTTQEKASAHLKGGAKKVVISAPSADAPMFVMGVNNETYKKDIQVLSNASCTTNCLAPLAKVINDNFGIIEG 172          
BLAST of CV712439 vs. ExPASy Swiss-Prot
Match: G3P_COCP7 (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides posadasii (strain C735) GN=GPD PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.666e-34
Identity = 65/89 (73.03%), Postives = 80/89 (89.89%), Query Frame = 3
Query:    3 IPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEG 269
            IPW + G DYV+ES+GVFTT  KASAH+KGGAKKV+ISAPSADAPMFV+GVN +TYK ++ ++SNASCTTNCLAPLAKVV++ FG++EG
Sbjct:   84 IPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYKSDIKVLSNASCTTNCLAPLAKVVNDNFGLVEG 172          
BLAST of CV712439 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.666e-34
Identity = 65/89 (73.03%), Postives = 80/89 (89.89%), Query Frame = 3
Query:    3 IPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEG 269
            IPW + G DYV+ES+GVFTT  KASAH+KGGAKKV+ISAPSADAPMFV+GVN +TYK ++ ++SNASCTTNCLAPLAKVV++ FG++EG
Sbjct:   84 IPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYKSDIKVLSNASCTTNCLAPLAKVVNDNFGLVEG 172          
The following BLAST results are available for this feature:
BLAST of CV712439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 346
Match NameE-valueIdentityDescription
G3P_AJECA4.685e-3777.53Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]
G3P_PARBA7.992e-3776.40Glyceraldehyde-3-phosphate dehydrogenase OS=Paraco... [more]
G3P_CRYCU1.507e-3576.40Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3PC_CRAPL2.571e-3575.28Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PE_MAIZE4.385e-3577.53Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PETHY1.276e-3475.28Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_DIACA1.276e-3476.40Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_EMENI1.666e-3474.16Glyceraldehyde-3-phosphate dehydrogenase OS=Emeric... [more]
G3P_COCP71.666e-3473.03Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_COCIM1.666e-3473.03Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001G05_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712439 ID=CV712439; Name=CV712439; organism=Citrus sinensis; type=EST; length=271bp
AGATCCCTTGGGGTGACTATGGGGTTGATTATGTTGTTGAATCTTCTGGA
GTCTTTACAACAATTGCGAAGGCTTCAGCTCACATGAAGGGTGGTGCAAA
AAAGGTGGTAATATCAGCTCCATCAGCTGATGCACCAATGTTTGTGGTAG
GAGTGAATGAAAAGACATACAAGCCAAACATGAACATTGTTTCTAATGCA
AGTTGTACTACCAATTGTCTTGCTCCTCTTGCTAAGGTGGTTCATGAGGA
GTTTGGAATTCTTGAAGGCTT
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