CV712275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712275 vs. ExPASy Swiss-Prot
Match: DEF06_ARATH (Defensin-like protein 6 OS=Arabidopsis thaliana GN=PDF2.5 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.318e-18 Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = -1 Query: 286 ASQMMVPAEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGVRRRCFCSKLC 456 +SQ ++ EGR CQS+SHHF C S+HNCA VCRNEGFSGG+C G RRC+C++LC Sbjct: 17 SSQEIIGGEGRTCQSKSHHFKYMCTSNHNCAIVCRNEGFSGGRCHGFHRRCYCTRLC 73
BLAST of CV712275 vs. ExPASy Swiss-Prot
Match: DEF_SOYBN (Defensin-like protein OS=Glycine max PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.655e-18 Identity = 38/57 (66.67%), Postives = 46/57 (80.70%), Query Frame = -1 Query: 286 ASQMMVPAEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGVRRRCFCSKLC 456 ASQ++V EGRVC+SQSH FHG C HNCA VCRNEGFSGG+C+ RRCFC+++C Sbjct: 19 ASQVVVQTEGRVCESQSHGFHGLCNRDHNCALVCRNEGFSGGRCKR-SRRCFCTRIC 74
BLAST of CV712275 vs. ExPASy Swiss-Prot
Match: DEF1_VIGUN (Defensin-like protein 1 OS=Vigna unguiculata PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.106e-16 Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = -1 Query: 286 RVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGVRRRCFCSKLC 426 RVC+SQSH F GAC HNCA VCRNEGFSGG CRG RRRCFC+ C Sbjct: 1 RVCESQSHGFKGACTGDHNCALVCRNEGFSGGNCRGFRRRCFCTLKC 47
BLAST of CV712275 vs. ExPASy Swiss-Prot
Match: DEF01_ARATH (Defensin-like protein 1 OS=Arabidopsis thaliana GN=PDF2.3 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.541e-15 Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = -1 Query: 286 VPAEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGVRRRCFCSKLC 441 V E R C+S+SH F G C S HNCA VC NEGF GGKCRG RRRC+C++ C Sbjct: 26 VTVEARTCESKSHRFKGPCVSTHNCANVCHNEGFGGGKCRGFRRRCYCTRHC 77
BLAST of CV712275 vs. ExPASy Swiss-Prot
Match: DEF_PETIN (Defensin-like protein OS=Petunia integrifolia PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.991e-15 Identity = 32/53 (60.38%), Postives = 36/53 (67.92%), Query Frame = -1 Query: 286 MVPAEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGVRRRCFCSKLC 444 M AE R C+SQSH FHG C NCA VC+ EGF GG CR RRRCFC++ C Sbjct: 26 MTSAEARTCESQSHRFHGTCVRESNCASVCQTEGFIGGNCRAFRRRCFCTRNC 78
BLAST of CV712275 vs. ExPASy Swiss-Prot
Match: DEF2_CAPAN (Defensin J1-2 OS=Capsicum annuum PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.991e-15 Identity = 32/50 (64.00%), Postives = 36/50 (72.00%), Query Frame = -1 Query: 286 AEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGVRRRCFCSKLC 435 AE R C+SQSH F G CFS NC VC EGF+GG CRG RRRCFC++ C Sbjct: 25 AEARTCESQSHRFKGLCFSKSNCGSVCHTEGFNGGHCRGFRRRCFCTRHC 74
BLAST of CV712275 vs. ExPASy Swiss-Prot
Match: DEF02_ARATH (Defensin-like protein 2 OS=Arabidopsis thaliana GN=PDF2.2 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.305e-14 Identity = 33/52 (63.46%), Postives = 36/52 (69.23%), Query Frame = -1 Query: 286 VPAEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGVRRRCFCSKLC 441 V E R C+SQSH F G C S NCA VC NEGF GG CRG RRRCFC++ C Sbjct: 26 VTVEARTCESQSHRFKGTCVSASNCANVCHNEGFVGGNCRGFRRRCFCTRHC 77
BLAST of CV712275 vs. ExPASy Swiss-Prot
Match: DFSD2_HELAN (Defensin SD2 OS=Helianthus annuus GN=SD2 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.797e-14 Identity = 38/77 (49.35%), Postives = 45/77 (58.44%), Query Frame = -1 Query: 286 KTNMKSXXXXXXXXXXXFASQMMVP--AEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGVRRRCFCSKLC 510 K++MK A++M P E R C+SQSH F G C S NCA VC +E FSGGKCRG RRRCFC+ C Sbjct: 2 KSSMKMFAALLLVVMCLLANEMGGPLVVEARTCESQSHKFKGTCLSDTNCANVCHSERFSGGKCRGFRRRCFCTTHC 78
BLAST of CV712275 vs. ExPASy Swiss-Prot
Match: DEF_NELNU (Defensin-like protein OS=Nelumbo nucifera PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.476e-14 Identity = 32/50 (64.00%), Postives = 35/50 (70.00%), Query Frame = -1 Query: 286 AEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGVRRRCFCSKLC 435 AE R C+SQSH F GAC S NCA VC+ EGF G C+G RRRCFC K C Sbjct: 28 AEARTCESQSHRFKGACLSDTNCASVCQTEGFPAGDCKGARRRCFCVKPC 77
BLAST of CV712275 vs. ExPASy Swiss-Prot
Match: DEF11_TRIKH (Defensin Tk-AMP-D1.1 OS=Triticum kiharae PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12 Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = -1 Query: 286 RVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGVRRRCFCSKLC 426 R C+S SH FHGACFS NCA VC+ EGF+ GKC GV+R C C+K C Sbjct: 1 RDCESDSHKFHGACFSDTNCANVCQTEGFTAGKCVGVQRHCHCTKDC 47 The following BLAST results are available for this feature:
BLAST of CV712275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712275 ID=CV712275; Name=CV712275; organism=Citrus sinensis; type=EST; length=546bpback to top |