CV712246

Overview
NameCV712246
Unique NameCV712246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1916 contig Csv1_Contig1916:34..768. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712246 vs. ExPASy Swiss-Prot
Match: PGKY_TOBAC (Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 1.055e-107
Identity = 197/221 (89.14%), Postives = 212/221 (95.93%), Query Frame = 1
Query:   73 MAAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILL 735
            MA KKSV  LKEADLKGKRVFVRVDLNVPLD+N NITDD R+RAAVPTIKYLM HG+ VIL+SHLGRPKGVTPKYSLKPLVPRLSELLGVEVK+AND IG EVEK+VAEIPEGGVLLLENVRF+KEEEKN+PEFAKKLASLADLYVNDAFG+AHRAHASTEGVAK+LKP+VAGFLMQKELDYLVGAV+NP+KPFAAIVGGSKVS+KIGVIESLLEKVD+LL
Sbjct:    1 MAVKKSVGSLKEADLKGKRVFVRVDLNVPLDENFNITDDTRIRAAVPTIKYLMQHGSHVILASHLGRPKGVTPKYSLKPLVPRLSELLGVEVKIANDSIGPEVEKLVAEIPEGGVLLLENVRFYKEEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPAVAGFLMQKELDYLVGAVANPQKPFAAIVGGSKVSSKIGVIESLLEKVDVLL 221          
BLAST of CV712246 vs. ExPASy Swiss-Prot
Match: PGKH_TOBAC (Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 369.392 bits (947), Expect = 1.130e-101
Identity = 187/219 (85.39%), Postives = 202/219 (92.24%), Query Frame = 1
Query:   79 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILL 735
            AKKSV  L  A+LKGK+VFVR DLNVPLDDN NITDD R+RAAVPTIK+LM +GAKVILSSHLGRPKGVTPKYSL PLVPRLSELLG++V    DCIG EVEK+VA +PEGGVLLLENVRF+KEEEKN+PEFAKKLASLADLYVNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYLVGAVSNPK+PFAAIVGGSKVS+KIGVIESLLEK DILL
Sbjct:   77 AKKSVGDLTAAELKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLMANGAKVILSSHLGRPKGVTPKYSLAPLVPRLSELLGIQVVKVEDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILL 295          
BLAST of CV712246 vs. ExPASy Swiss-Prot
Match: PGKH_SPIOL (Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2)

HSP 1 Score: 369.392 bits (947), Expect = 1.130e-101
Identity = 186/219 (84.93%), Postives = 205/219 (93.61%), Query Frame = 1
Query:   79 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILL 735
            AKKSV  L  ADLKGK+VFVR DLNVPLDD+ NITDD R+RAA+PTIK+L+ +GAKVILSSHLGRPKGVTPK+SL PLVPRLSELLG++V  A+DCIG +VEK+VAE+PEGGVLLLENVRF+KEEEKNDPEFAKKLASLADLYVNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYLVGAVSNPK+PFAAIVGGSKVS+KIGVIESLLEK DILL
Sbjct:   30 AKKSVGDLTSADLKGKKVFVRADLNVPLDDSQNITDDTRIRAAIPTIKHLINNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGLQVVKADDCIGPDVEKLVAELPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILL 248          
BLAST of CV712246 vs. ExPASy Swiss-Prot
Match: PGKY_WHEAT (Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.631e-100
Identity = 184/221 (83.26%), Postives = 203/221 (91.86%), Query Frame = 1
Query:   73 MAAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILL 735
            MA K+SV  L EADLKGK+VFVR DLNVPLDD   ITDD R+RA++PTIKYL+  GAKVIL+SHLGRPKGVTPK+SLKPLV RLSELLG+EV MA DCIGEEVEK+ A +P+GGVLLLENVRF+KEEEKNDPEFAKKLAS+ADLYVNDAFG+AHRAHASTEGV KFL+PSVAGFLMQKELDYLVGAV+NPKKPFAAIVGGSKVS+KIGVIESLL KVDIL+
Sbjct:    1 MATKRSVGTLGEADLKGKKVFVRADLNVPLDDAQKITDDTRIRASIPTIKYLLEKGAKVILASHLGRPKGVTPKFSLKPLVARLSELLGLEVVMAPDCIGEEVEKLAAALPDGGVLLLENVRFYKEEEKNDPEFAKKLASVADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLMQKELDYLVGAVANPKKPFAAIVGGSKVSSKIGVIESLLAKVDILI 221          
BLAST of CV712246 vs. ExPASy Swiss-Prot
Match: PGKH_ARATH (Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2)

HSP 1 Score: 364.77 bits (935), Expect = 2.782e-100
Identity = 183/219 (83.56%), Postives = 202/219 (92.24%), Query Frame = 1
Query:   79 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILL 735
            AKKSV  L   DLKGK+VFVR DLNVPLDDN NITDD R+RAA+PTIK+L+ +GAKVILS+HLGRPKGVTPK+SL PLVPRLSELLG+EV  A+DCIG EVE +VA +PEGGVLLLENVRF+KEEEKN+P+FAKKLASLADLYVNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYLVGAVSNPK+PFAAIVGGSKVS+KIGVIESLLEK DILL
Sbjct:   75 AKKSVGDLNSVDLKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKFLIENGAKVILSTHLGRPKGVTPKFSLAPLVPRLSELLGIEVVKADDCIGPEVETLVASLPEGGVLLLENVRFYKEEEKNEPDFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILL 293          
BLAST of CV712246 vs. ExPASy Swiss-Prot
Match: PGKH_WHEAT (Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 2.604e-98
Identity = 182/219 (83.11%), Postives = 199/219 (90.87%), Query Frame = 1
Query:   79 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILL 735
            AKKSV  L  ADL+GKRV VR DLNVPLDDN NITDD R+RAA+PTIKYL+ +GAKVIL+SHLGRPKGVTPK+SL PLVPRLSELLG+EVK A D IG EVEK+VA++  G VLLLENVRF+KEEEKNDPEFAKKLASLADL+VNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYL GAVSNPK+PFAAIVGGSKVS+KIGVIESLLEK DILL
Sbjct:   74 AKKSVGDLTAADLEGKRVLVRADLNVPLDDNQNITDDTRIRAAIPTIKYLLSNGAKVILTSHLGRPKGVTPKFSLAPLVPRLSELLGIEVKKAEDVIGPEVEKLVADLANGAVLLLENVRFYKEEEKNDPEFAKKLASLADLFVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILL 292          
BLAST of CV712246 vs. ExPASy Swiss-Prot
Match: PGKH_VOLCA (Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 8.133e-84
Identity = 164/222 (73.87%), Postives = 185/222 (83.33%), Query Frame = 1
Query:   76 AAKKSVSVLKEADLKGKRVFVRVDLNVPLDDN-LNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILL 735
            A KKSV  L +ADL+GKRVFVR DLNVPLD   L ITDD R+RAAVPT+KYL+ +GAKV+L+SHLGRPKG    KY L P+V RLSELLG EVK  +DCIG  VE+ VA +  G +LLLENVRF+KEEEKNDPEFAKKLAS ADLYVNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYL GAVS PK+PF AIVGGSKVS+KI VIE L+EK D ++
Sbjct:   61 AVKKSVGDLGKADLEGKRVFVRADLNVPLDKKTLAITDDTRIRAAVPTLKYLLDNGAKVLLTSHLGRPKGGPEDKYRLTPVVARLSELLGKEVKKVDDCIGPSVEQAVASLKSGELLLLENVRFYKEEEKNDPEFAKKLASNADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSAPKRPFVAIVGGSKVSSKITVIEKLMEKCDKII 282          
BLAST of CV712246 vs. ExPASy Swiss-Prot
Match: PGKH_CHLRE (Phosphoglycerate kinase, chloroplastic OS=Chlamydomonas reinhardtii PE=1 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.534e-82
Identity = 161/222 (72.52%), Postives = 184/222 (82.88%), Query Frame = 1
Query:   76 AAKKSVSVLKEADLKGKRVFVRVDLNVPLDD-NLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILL 735
            A KKSV  L +ADL+GKRVFVR DLNVPLD   L ITDD R+RAAVPT+KYL+ +GAKV+L+SHLGRPKG    KY L P+V RLSELLG  V   +DCIG EVEK V  +  G +LLLEN RF+KEEEKN+PEFAKKLA+ ADLYVNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYL GAVSNPK+PF AIVGGSKVS+KI VIE+L+EK D ++
Sbjct:   60 AVKKSVGDLHKADLEGKRVFVRADLNVPLDKATLAITDDTRIRAAVPTLKYLLDNGAKVLLTSHLGRPKGGPEDKYRLTPVVARLSELLGKPVTKVDDCIGPEVEKAVGAMKNGELLLLENCRFYKEEEKNEPEFAKKLAANADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFVAIVGGSKVSSKITVIEALMEKCDKII 281          
BLAST of CV712246 vs. ExPASy Swiss-Prot
Match: PGK_ANAVT (Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.669e-78
Identity = 149/219 (68.04%), Postives = 174/219 (79.45%), Query Frame = 1
Query:   79 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILL 735
            +KK+V+ L  AD+ GKR  VRVD NVPLDD  NITDD R+RAA+PTI+ L   GAKVIL+SH GRPKGV  K  L P+  RLSELLG EV   +D IG+EV   VA +  G VLLLENVRF+KEEEKNDPEFAKKLA+ AD YVNDAFG+AHRAHASTEGV KFL PSVAG+L++KEL YL  A+ NP++P AAI+GGSKVS+KIGVIE+LLEK D L+
Sbjct:    2 SKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDEKLRLTPVAKRLSELLGQEVVKTDDSIGDEVAAKVAALQNGQVLLLENVRFYKEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLI 220          
BLAST of CV712246 vs. ExPASy Swiss-Prot
Match: PGK_ANASP (Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 8.710e-78
Identity = 149/219 (68.04%), Postives = 174/219 (79.45%), Query Frame = 1
Query:   79 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILL 735
            +KK+V+ L  AD+ GKR  VRVD NVPLDD  NITDD R+RAA+PTI+ L   GAKVIL+SH GRPKGV  K  L P+  RLSELLG EV   +D IG+EV   VA +  G VLLLENVRF+KEEEKNDPEFAKKLA+ AD YVNDAFG+AHRAHASTEGV KFL PSVAG+L++KEL YL  A+ NP++P AAI+GGSKVS+KIGVIE+LLEK D L+
Sbjct:    2 SKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDEKLRLTPVAKRLSELLGQEVIKTDDSIGDEVAAKVATLQNGQVLLLENVRFYKEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLI 220          
The following BLAST results are available for this feature:
BLAST of CV712246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGKY_TOBAC1.055e-10789.14Phosphoglycerate kinase, cytosolic OS=Nicotiana ta... [more]
PGKH_TOBAC1.130e-10185.39Phosphoglycerate kinase, chloroplastic OS=Nicotian... [more]
PGKH_SPIOL1.130e-10184.93Phosphoglycerate kinase, chloroplastic (Fragment) ... [more]
PGKY_WHEAT1.631e-10083.26Phosphoglycerate kinase, cytosolic OS=Triticum aes... [more]
PGKH_ARATH2.782e-10083.56Phosphoglycerate kinase, chloroplastic OS=Arabidop... [more]
PGKH_WHEAT2.604e-9883.11Phosphoglycerate kinase, chloroplastic OS=Triticum... [more]
PGKH_VOLCA8.133e-8473.87Phosphoglycerate kinase, chloroplastic OS=Volvox c... [more]
PGKH_CHLRE1.534e-8272.52Phosphoglycerate kinase, chloroplastic OS=Chlamydo... [more]
PGK_ANAVT6.669e-7868.04Phosphoglycerate kinase OS=Anabaena variabilis (st... [more]
PGK_ANASP8.710e-7868.04Phosphoglycerate kinase OS=Anabaena sp. (strain PC... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001B24_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001B24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712246 ID=CV712246; Name=CV712246; organism=Citrus sinensis; type=EST; length=735bp
CTTCGATCTCATTCCAAAATCTAACCAAAACCCTTTCTCGATTTCTCTGA
TCTCGTGTTTGATCGAATCAAAATGGCCGCCAAGAAGAGTGTAAGCGTTC
TAAAAGAAGCTGATTTGAAGGGAAAGAGAGTGTTCGTACGAGTGGATCTG
AACGTGCCGTTGGATGACAACTTGAATATCACCGATGACAACAGAGTCCG
TGCTGCTGTTCCCACTATCAAATACCTGATGGGTCATGGCGCCAAAGTCA
TTCTCTCCAGTCACTTGGGGCGTCCAAAGGGTGTTACACCCAAGTACAGC
TTGAAACCTCTTGTGCCAAGGCTTTCTGAACTTCTTGGAGTTGAGGTTAA
AATGGCAAACGACTGCATTGGTGAAGAAGTTGAAAAAATGGTGGCTGAAA
TTCCCGAAGGGGGCGTCTTGCTCCTCGAAAATGTGAGGTTCCATAAGGAG
GAAGAGAAGAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGCAGA
TCTCTATGTTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTTCCA
CTGAGGGTGTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTATG
CAAAAGGAACTAGATTATCTTGTTGGAGCTGTTTCAAATCCCAAGAAACC
ATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCAACTAAGATCGGTGTTA
TTGAATCACTTTTGGAGAAGGTTGACATTCTATTG
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