CV712204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG1_ORYSJ (Coatomer subunit gamma-1 OS=Oryza sativa subsp. japonica GN=Os03g0227000 PE=2 SV=2) HSP 1 Score: 299.286 bits (765), Expect = 1.782e-80 Identity = 154/209 (73.68%), Postives = 171/209 (81.82%), Query Frame = -2 Query: 213 PEQLLENVTVIVDXXXXXXXXXXXSKPLRSLPYDSPGQTFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNVSDMIHEIVASG 839 PEQLLENVTV VD SKPLRSLPYDSPGQ FVAFEKPE VPA GKFSN+L+FIVKEVD +T EYQ+EDLE+V+ADY+++V VSNFRNAWE++ P+ ERVDEYGLG RESLAEAVSAVIS+LGMQPCEGTEVV N+RSHTCLLSGVFIG+ KVLVRL FG+ GPKEVAMKLAVRS+D VSD IHEIVASG Sbjct: 676 PEQLLENVTVYVDATDAEEFSEVCSKPLRSLPYDSPGQIFVAFEKPEHVPATGKFSNVLKFIVKEVDTSTGEVDEDGVEDEYQIEDLEIVSADYMLRVAVSNFRNAWENMDPESERVDEYGLGVRESLAEAVSAVISILGMQPCEGTEVVPKNARSHTCLLSGVFIGDAKVLVRLSFGLSGPKEVAMKLAVRSDDPEVSDKIHEIVASG 884
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG2_ORYSJ (Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica GN=Os07g0201100 PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 3.970e-80 Identity = 153/209 (73.21%), Postives = 170/209 (81.34%), Query Frame = -2 Query: 213 PEQLLENVTVIVDXXXXXXXXXXXSKPLRSLPYDSPGQTFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNVSDMIHEIVASG 839 PEQLLE V V VD +K LRSLPYDSPGQTFVAFEK EGV A GKFSN+L+FIVKEVDP+T EYQLEDLE+ +ADY++KVGVSNFRNAWES+ P+ ERVDEYGLG RESLAEAVSAVI +LGMQPCEGT+VV +NSRSHTCLLSGVFIGNVKVLVRL FG+ GPKEVAMKLAVRS+D +SD IHEIVA+G Sbjct: 681 PEQLLEEVVVFVDASEADEFSEVATKSLRSLPYDSPGQTFVAFEKLEGVLATGKFSNILKFIVKEVDPSTGEADDDGVEDEYQLEDLEITSADYMLKVGVSNFRNAWESMDPESERVDEYGLGARESLAEAVSAVIGILGMQPCEGTDVVPSNSRSHTCLLSGVFIGNVKVLVRLSFGLSGPKEVAMKLAVRSDDPEISDKIHEIVANG 889
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG_ARATH (Coatomer subunit gamma OS=Arabidopsis thaliana GN=At4g34450 PE=1 SV=2) HSP 1 Score: 277.33 bits (708), Expect = 7.252e-74 Identity = 144/209 (68.90%), Postives = 161/209 (77.03%), Query Frame = -2 Query: 213 PEQLLENVTVIVDXXXXXXXXXXXSKPLRSLPYDSPGQTFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNVSDMIHEIVASG 839 PEQLLE V VIVD SK L SLPYDSPGQ FV FEKP GVPAVGKFSN L F+VKEVDP+T EYQLEDLEVVA DY++KVGVSNFRNAWES+ + ERVDEYGLG RESL EAV AV+ LLGMQ CEGTE + N+RSHTCLLSGV+IGNVKVLVR QFG+D K++AMKL VR+ED +V++ IHEIVASG Sbjct: 678 PEQLLERVNVIVDASEAEEFSEVTSKALNSLPYDSPGQAFVVFEKPAGVPAVGKFSNTLTFVVKEVDPSTGEAEDDGVEDEYQLEDLEVVAGDYMVKVGVSNFRNAWESMDEEDERVDEYGLGQRESLGEAVKAVMDLLGMQTCEGTETIPLNARSHTCLLSGVYIGNVKVLVRAQFGMDSSKDIAMKLTVRAEDVSVAEAIHEIVASG 886
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG2_BOVIN (Coatomer subunit gamma-2 OS=Bos taurus GN=COPG2 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.870e-29 Identity = 78/204 (38.24%), Postives = 112/204 (54.90%), Query Frame = -2 Query: 234 EQLLENVTVIVDXXXXXXXXXXXSKPLRSLPYDSPGQTFVAFEKPE--GVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 836 +QLLE VTV V+ P SLPY+ PG + PE + A G FS ++F V++ DP T EY LEDLEV +D++ KV NF AWE +G FE+ + + L ++L EAV+ +I+ LGMQPCE ++ V N SH+ L+GV+ G +LVR + + DG V M++ VRS++ D+I Sbjct: 668 DQLLEKVTVQVEPSEAYEVLCCVPAP--SLPYNQPGVCYTLVRLPEDDSIAAAGTFSCTMKFTVRDCDPDTGVPTEEGYDDEYVLEDLEVTVSDHIQKVMKPNFAAAWEEVGNTFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSHSLYLAGVYRGGYDLLVRSRLALADG---VTMQVTVRSKEGTPVDVI 866
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG_HUMAN (Coatomer subunit gamma OS=Homo sapiens GN=COPG PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.441e-29 Identity = 78/203 (38.42%), Postives = 111/203 (54.68%), Query Frame = -2 Query: 234 EQLLENVTVIVDXXXXXXXXXXXSKPLRSLPYDSPGQ--TFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNVSDMI 836 +Q LENVTV ++ P RSLPY+ PG T VA K + FS M++F VK+ DPTT EY LEDLEV AD++ KV NF AW+ +G +FE+ + + L ++L EAV ++ LGM PCE ++ V +N +HT LL+GVF G +LVR + + V M++ RS ++ D+I Sbjct: 671 DQTLENVTVQMEPTEAYEVLCYV--PARSLPYNQPGTCYTLVALPKEDPTAVACTFSCMMKFTVKDCDPTTGETDDEGYEDEYVLEDLEVTVADHIQKVMKLNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPDNKNTHTLLLAGVFRGGHDILVRSRLLL--LDTVTMQVTARSLEELPVDII 869
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG2_HUMAN (Coatomer subunit gamma-2 OS=Homo sapiens GN=COPG2 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.212e-28 Identity = 76/204 (37.25%), Postives = 111/204 (54.41%), Query Frame = -2 Query: 234 EQLLENVTVIVDXXXXXXXXXXXSKPLRSLPYDSPGQTFVAFEKPEGVPAV--GKFSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 836 +QLLE VTV ++ P SLPY+ PG + P+ P G FS ++F V++ DP T EY LEDLEV +D++ KV NF AWE +G FE+ + + L ++L EAV+ +I+ LGMQPCE ++ V N SH+ L+G+F G +LVR + + DG V M++ VRS++ D+I Sbjct: 668 DQLLEKVTVQMEPSDSYEVLSCIPAP--SLPYNQPGICYTLVRLPDDDPTAVAGSFSCTMKFTVRDCDPNTGVPDEDGYDDEYVLEDLEVTVSDHIQKVLKPNFAAAWEEVGDTFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSHSLYLAGIFRGGYDLLVRSRLALADG---VTMQVTVRSKERTPVDVI 866
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG2_XENTR (Coatomer subunit gamma-2 OS=Xenopus tropicalis GN=copg2 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.583e-28 Identity = 77/204 (37.75%), Postives = 112/204 (54.90%), Query Frame = -2 Query: 234 EQLLENVTVIVDXXXXXXXXXXXSKPLRSLPYDSPGQTFVAFEKPEGVPAVGK--FSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 836 +QLLE VTV ++ P SLPY+ PG ++ P+ P FS ++F+V++ DP T EY LEDLEV +D++ K+ NF AWE IG +E+ + + L +SL EAV+ +I LGMQPCE ++ V N SH LSGV+ G VLVR + + DG V M++ VRS+D+ +++I Sbjct: 669 DQLLEKVTVQMEPSEAYEVVHYVPAP--SLPYNQPGISYTLVRLPDDDPTAVSCTFSCTMKFVVRDCDPQTGVPDDEGYSDEYVLEDLEVTLSDHIQKILKPNFGAAWEEIGDTYEKEETFALTTTKSLEEAVNNIIKFLGMQPCERSDKVPENKNSHVLYLSGVYRGGHDVLVRSRLALADG---VTMQVTVRSQDETPANVI 867
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG_RAT (Coatomer subunit gamma OS=Rattus norvegicus GN=Copg PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.068e-28 Identity = 76/203 (37.44%), Postives = 110/203 (54.19%), Query Frame = -2 Query: 234 EQLLENVTVIVDXXXXXXXXXXXSKPLRSLPYDSPGQ--TFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNVSDMI 836 +Q LENVTV ++ P+RSLPY+ PG T VA K + FS +++F VK+ DP T EY LEDLEV AD++ KV NF AW+ +G +FE+ + + L ++L EAV ++ LGM PCE ++ V N +HT LL+GVF G +LVR + + V M++ RS ++ D+I Sbjct: 671 DQTLENVTVQMEPTEAYEVLSYV--PVRSLPYNQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPNTGEIDEEGYEDEYVLEDLEVTVADHIQKVMKVNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPENKNTHTLLLAGVFRGGHDILVRSRLLL--LDTVTMQVTARSSEELPVDII 869
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG_BOVIN (Coatomer subunit gamma OS=Bos taurus GN=COPG PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.700e-28 Identity = 75/203 (36.95%), Postives = 111/203 (54.68%), Query Frame = -2 Query: 234 EQLLENVTVIVDXXXXXXXXXXXSKPLRSLPYDSPGQ--TFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNVSDMI 836 +Q LENVTV ++ P RSLPY+ PG T VA K + FS +++F VK+ DPTT EY LEDLEV AD++ KV NF AW+ +G +F++ + + L ++L EAV ++ LGM PCE ++ V +N +HT LL+GVF G +LVR + + V M++ RS ++ D++ Sbjct: 671 DQTLENVTVQMEPSEAYEVLCYV--PARSLPYNQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPTTGEADDEGYEDEYVLEDLEVTIADHIQKVMKLNFEAAWDEVGDEFQKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPDNKNTHTLLLAGVFRGGHDILVRSRLLL--LDTVTMQVTARSSEELPVDIV 869
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG2_DANRE (Coatomer subunit gamma-2 OS=Danio rerio GN=copg2 PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 3.527e-28 Identity = 71/179 (39.66%), Postives = 100/179 (55.87%), Query Frame = -2 Query: 234 PLRSLPYDSPGQTFVAFEKPEGVPAVGK--FSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 761 P +LPY PG + PE P FS ++++V++ DP T EY LEDLEV AD++ KV NF AW+ +G + E+ + + L +L EAV+ ++S LGMQPCE ++ V N SH L+GVF G VLVR + + DG V +++ VRS DDNV D+I Sbjct: 693 PAANLPYSQPGSCYSLVRLPEDDPTAVSCTFSCTMKYLVRDCDPNTGEPDDDGYDDEYVLEDLEVTVADHIQKVLKPNFAAAWDEVGDECEKEETFALATVRTLDEAVNNIVSFLGMQPCERSDKVPENKNSHVLFLAGVFRGGHDVLVRARLALADG---VTIQVTVRSTDDNVVDVI 868 The following BLAST results are available for this feature:
BLAST of CV712204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712204 ID=CV712204; Name=CV712204; organism=Citrus sinensis; type=EST; length=843bpback to top |