CV712200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712200 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19 Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 583 PLFETKRAKGRVIR---RLFAASIFVGIGFIVVYRLSHRPRNGEDG--RWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQ 831 PLF T++ GR+ R+ AA++F G+ I +YR +H P G DG RWAW+G+L AELWF YWVLT ++RW VYRRTFKDRL+Q Sbjct: 18 PLFATEKP-GRMAMAAYRVSAATVFAGVLLIWLYRATHLPPGGGDGVRRWAWLGMLAAELWFGFYWVLTLSVRWCPVYRRTFKDRLAQ 104
BLAST of CV712200 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17 Identity = 42/83 (50.60%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 586 LFETKRAKGRVIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQR 834 LF T++ GR + RL AA++ GI ++ YR + P GE GR AW+G+ AELWF++YWV+TQ++RW V RRTFK+RL++R Sbjct: 11 LFATEKVGGRAVYRLQAATVAAGILLVLYYRATRVPAAGE-GRAAWLGMAAAELWFAVYWVITQSVRWCPVRRRTFKNRLAER 92
BLAST of CV712200 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 8.249e-17 Identity = 40/84 (47.62%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 583 PLFETKRAKGRVIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQR 834 PLF T+ GR + R+ AA++ GI ++ YR + P GE GR AW+G+ AELWF++YWV+ Q++RW RRTF+DRL++R Sbjct: 15 PLFTTEELGGRAVYRVQAATVAAGILLVLYYRATRVPAAGE-GRAAWLGMAAAELWFAVYWVIAQSVRWRPFRRRTFRDRLAER 97
BLAST of CV712200 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13 Identity = 43/86 (50.00%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 583 PLFETKRAKGRVIR-RLFAASIFVGIGFIVVYRLSHRPRNGED-GRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQR 834 PLFET+R GRVI R F+AS+FV I I YR+ N R W + E+WF LYWV+TQ+ RWN V+R F DRLS+R Sbjct: 18 PLFETRRRTGRVIAYRFFSASVFVCICLIWFYRIGEIGDNRTVLDRLIWFVMFIVEIWFGLYWVVTQSSRWNPVWRFPFSDRLSRR 103 The following BLAST results are available for this feature:
BLAST of CV712200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712200 ID=CV712200; Name=CV712200; organism=Citrus sinensis; type=EST; length=847bpback to top |