CX302412

Overview
NameCX302412
Unique NameCX302412
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX302412 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.224e-38
Identity = 72/82 (87.80%), Postives = 80/82 (97.56%), Query Frame = 1
Query:   16 EPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 261
            +PDQFKAINDEGMPMYQRPFM+GKLYIHF+V+FP+SL+P+QCK LE VLPPRTSVQL+DMELDECEETTLHDVNIEEEMRRK
Sbjct:  308 KPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRK 389          
BLAST of CX302412 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.027e-36
Identity = 68/82 (82.93%), Postives = 77/82 (93.90%), Query Frame = 1
Query:   16 EPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 261
            +PDQFK INDEGMPMYQRPFMRGKLYIHF+VDFP+SL+PDQCK LE+VLP R + +LTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  310 KPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRK 391          
BLAST of CX302412 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.502e-35
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 1
Query:   16 EPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 261
            +PDQFKAINDEGMPMYQRPFMRGKLYI F VDFP+SL+PDQCK++E+VLP   S QLTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  289 KPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRK 370          
BLAST of CX302412 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.091e-33
Identity = 63/82 (76.83%), Postives = 75/82 (91.46%), Query Frame = 1
Query:   16 EPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 261
            +PDQFKAI DEGMP+YQRPFM+GK+YIHFTV+FP+SL+PDQ K LE +LPP+ S+ LT MELDECEETTLH+VNIEEEM+RK
Sbjct:  310 KPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRK 391          
BLAST of CX302412 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 6.979e-33
Identity = 63/82 (76.83%), Postives = 75/82 (91.46%), Query Frame = 1
Query:   16 EPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 261
            +PD +KAI+DEGMP+YQRPFM+GKLYIHFTV+FP+SLSPDQ K LE VLP  ++ QL+DME+DECEETTLHDVNIE+EMRRK
Sbjct:  310 KPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRK 391          
BLAST of CX302412 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.008e-31
Identity = 60/82 (73.17%), Postives = 73/82 (89.02%), Query Frame = 1
Query:   16 EPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 261
            +PD +KAI+DEGMP+YQRPFM+GKLYIHFTV+FPESLSPDQ K +E VLP  T   ++DME+D+CEETTLHDVNIE+EM+RK
Sbjct:  311 KPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRK 392          
The following BLAST results are available for this feature:
BLAST of CX302412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
DNJH_CUCSA4.224e-3887.80DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH2_ALLPO3.027e-3682.93DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH1_ALLPO1.502e-3582.93DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJH_ATRNU4.091e-3376.83DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ3_ARATH6.979e-3376.83Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNAJ2_ARATH1.008e-3173.17Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionC08020E01SK PhyRootSw1 Citrus sinensis cDNA clone C08020E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX302412 ID=CX302412; Name=CX302412; organism=Citrus sinensis; type=EST; length=577bp
CGAATTCGGCACGAGGAGCCGGACCAATTCAAGGCCATAAATGATGAAGG
AATGCCTATGTATCAGAGGCCATTTATGAGGGGCAAACTGTACATTCATT
TCACTGTTGACTTCCCTGAGTCACTGAGCCCAGACCAGTGCAAGATGCTG
GAGACCGTACTACCTCCAAGGACCTCAGTCCAGCTCACCGATATGGAACT
GGATGAGTGTGAAGAAACAACCCTGCATGATGTGAACATTGAGGAGGAAA
TGCGAAGGAAGCAACAAGCAGCTCAGGAGGCATACGATGAAGATGACGAT
ATGCAAGGTGGCGCCCAGAGAGTGCAGTGTGCTCAGCAGTGATGATGTAG
AAGAAAAGGGGTGGCCTGATTTAGTATTTTCATTGTTTGGGAGAAAAAGA
TTCTCAACATATTTATTTTCTGTTATAGGCTTTAGAGGTTCTAGTTTTGG
TTTGTCTGTCTTTATTCTTATGTTTTTCTGATAACTGACTATGTAATGGA
ATTCTAGCGTTGCACCTTCAGACTCAATGCTCATAATTAATATTTTTAGT
GTTTACAATAAAAAAAAAAAAAAAAAA
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